More than 300 homologs were found in PanDaTox collection
for query gene YpsIP31758_1618 on replicon NC_009708
Organism: Yersinia pseudotuberculosis IP 31758



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010465  YPK_1726  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  99.62 
 
 
526 aa  1066    Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1618  methyl-accepting chemotaxis protein  100 
 
 
526 aa  1070    Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2845  methyl-accepting chemotaxis protein  99.81 
 
 
526 aa  1067    Yersinia pestis Angola  Bacteria  normal  normal  0.208852 
 
 
-
 
NC_007951  Bxe_A2405  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  54.84 
 
 
514 aa  556  1e-157  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0000957151  normal  0.313744 
 
 
-
 
NC_006348  BMA0264  methyl-accepting chemotaxis protein  52.91 
 
 
580 aa  534  1e-150  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0618  methyl-accepting chemotaxis protein  52.79 
 
 
583 aa  531  1e-150  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2390  methyl-accepting chemotaxis protein  52.91 
 
 
580 aa  534  1e-150  Burkholderia mallei NCTC 10229  Bacteria  normal  0.790589  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2685  methyl-accepting chemotaxis protein  52.91 
 
 
580 aa  534  1e-150  Burkholderia mallei SAVP1  Bacteria  normal  0.394636  n/a   
 
 
-
 
NC_009080  BMA10247_2473  methyl-accepting chemotaxis protein  52.91 
 
 
580 aa  534  1e-150  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3559  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  53.2 
 
 
511 aa  530  1e-149  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3399  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  53.4 
 
 
511 aa  530  1e-149  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0839  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.64 
 
 
511 aa  528  1e-148  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0927  methyl-accepting chemotaxis protein  52.71 
 
 
623 aa  527  1e-148  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0760  aerotaxis sensor receptor  52.71 
 
 
583 aa  528  1e-148  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0749  aerotaxis sensor receptor  52.71 
 
 
669 aa  525  1e-148  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0805  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.62 
 
 
511 aa  524  1e-147  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RSp1224  aerotaxis sensor receptor transmembrane protein  53.68 
 
 
514 aa  520  1e-146  Ralstonia solanacearum GMI1000  Bacteria  normal  0.229455  normal  0.54431 
 
 
-
 
NC_008391  Bamb_4714  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.13 
 
 
535 aa  518  1e-146  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0268  methyl-accepting chemotaxis sensory transducer  51.94 
 
 
514 aa  514  1e-144  Burkholderia sp. 383  Bacteria  normal  normal  0.723346 
 
 
-
 
NC_008061  Bcen_3003  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.71 
 
 
535 aa  512  1e-144  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5363  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.71 
 
 
514 aa  512  1e-144  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0430629  normal 
 
 
-
 
NC_010515  Bcenmc03_4907  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.33 
 
 
514 aa  507  9.999999999999999e-143  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_5364  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.55 
 
 
514 aa  506  9.999999999999999e-143  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5243  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.74 
 
 
514 aa  508  9.999999999999999e-143  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0641076  normal 
 
 
-
 
NC_008061  Bcen_3002  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.36 
 
 
514 aa  502  1e-141  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4906  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  51.55 
 
 
514 aa  500  1e-140  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5244  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.33 
 
 
514 aa  498  1e-140  Burkholderia ambifaria MC40-6  Bacteria  normal  0.362794  normal 
 
 
-
 
NC_008391  Bamb_4715  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.13 
 
 
514 aa  499  1e-140  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0267  methyl-accepting chemotaxis sensory transducer  51.74 
 
 
514 aa  494  9.999999999999999e-139  Burkholderia sp. 383  Bacteria  normal  normal  0.715012 
 
 
-
 
NC_007650  BTH_II2125  methyl-accepting chemotaxis protein  52.12 
 
 
514 aa  489  1e-137  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_3362  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  52.13 
 
 
514 aa  487  1e-136  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.234118 
 
 
-
 
NC_007435  BURPS1710b_A1814  aerotaxis receptor  52.91 
 
 
514 aa  479  1e-134  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_2118  methyl-accepting chemotaxis protein  52.91 
 
 
514 aa  479  1e-134  Burkholderia mallei NCTC 10229  Bacteria  normal  0.333375  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0387  aerotaxis sensor receptor  52.91 
 
 
514 aa  479  1e-134  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0904499  n/a   
 
 
-
 
NC_009079  BMA10247_A0801  methyl-accepting chemotaxis protein  52.91 
 
 
514 aa  479  1e-134  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0485  aerotaxis sensor receptor  52.91 
 
 
514 aa  479  1e-134  Burkholderia pseudomallei 668  Bacteria  normal  0.537813  n/a   
 
 
-
 
NC_009436  Ent638_2094  methyl-accepting chemotaxis sensory transducer  47.5 
 
 
511 aa  462  1e-129  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA1487  methyl-accepting chemotaxis protein  53.33 
 
 
494 aa  460  9.999999999999999e-129  Burkholderia mallei ATCC 23344  Bacteria  normal  0.625343  n/a   
 
 
-
 
NC_012912  Dd1591_1779  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.27 
 
 
517 aa  456  1e-127  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_0628  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.56 
 
 
506 aa  452  1.0000000000000001e-126  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_3366  aerotaxis receptor  47.64 
 
 
506 aa  452  1.0000000000000001e-126  Escherichia coli SMS-3-5  Bacteria  normal  0.775088  normal 
 
 
-
 
NC_012917  PC1_2293  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.85 
 
 
517 aa  455  1.0000000000000001e-126  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_02941  fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component  47.44 
 
 
506 aa  450  1e-125  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0629  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.44 
 
 
506 aa  450  1e-125  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_3538  aerotaxis receptor  47.56 
 
 
506 aa  451  1e-125  Escherichia coli E24377A  Bacteria  normal  0.840702  n/a   
 
 
-
 
NC_010658  SbBS512_E3508  aerotaxis receptor  47.37 
 
 
506 aa  450  1e-125  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_02891  hypothetical protein  47.44 
 
 
506 aa  450  1e-125  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3253  aerotaxis receptor  47.44 
 
 
506 aa  450  1e-125  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2593  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.85 
 
 
517 aa  449  1e-125  Pectobacterium wasabiae WPP163  Bacteria  normal  0.460221  n/a   
 
 
-
 
NC_011353  ECH74115_4385  aerotaxis receptor  47.64 
 
 
506 aa  451  1e-125  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.472426  normal 
 
 
-
 
NC_012917  PC1_2292  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.16 
 
 
517 aa  446  1.0000000000000001e-124  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3527  methyl-accepting chemotaxis sensory transducer  45.4 
 
 
506 aa  442  1e-123  Enterobacter sp. 638  Bacteria  normal  normal  0.538358 
 
 
-
 
NC_012880  Dd703_1744  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.21 
 
 
517 aa  444  1e-123  Dickeya dadantii Ech703  Bacteria  normal  0.514978  n/a   
 
 
-
 
NC_012880  Dd703_3127  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.26 
 
 
515 aa  442  9.999999999999999e-123  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1802  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.87 
 
 
515 aa  432  1e-120  Dickeya zeae Ech1591  Bacteria  normal  0.0853497  n/a   
 
 
-
 
NC_011080  SNSL254_A3477  aerotaxis receptor  46.85 
 
 
506 aa  432  1e-120  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3403  aerotaxis receptor  46.46 
 
 
506 aa  432  1e-120  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3511  aerotaxis receptor  46.85 
 
 
506 aa  432  1e-120  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  0.00000000402751 
 
 
-
 
NC_011205  SeD_A3573  aerotaxis receptor  46.46 
 
 
506 aa  432  1e-120  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0352648  normal  0.227962 
 
 
-
 
NC_011094  SeSA_A3407  aerotaxis receptor  46.46 
 
 
506 aa  431  1e-119  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2920  aerotaxis sensor receptor  45.61 
 
 
549 aa  428  1e-118  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.48 
 
 
598 aa  427  1e-118  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_2406  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.49 
 
 
566 aa  422  1e-117  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4269  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.65 
 
 
556 aa  411  1e-113  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6942  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.46 
 
 
566 aa  393  1e-108  Burkholderia phytofirmans PsJN  Bacteria  normal  0.819674  normal 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.99 
 
 
551 aa  394  1e-108  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_007952  Bxe_B2984  methyl-accepting chemotaxis sensory transducer, Pas/Pac sensor  43.33 
 
 
565 aa  393  1e-108  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2113  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.56 
 
 
550 aa  389  1e-107  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1294  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.89 
 
 
575 aa  387  1e-106  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00873235 
 
 
-
 
NC_007404  Tbd_1618  chemotaxis sensory transducer  41.22 
 
 
557 aa  385  1e-106  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.126465 
 
 
-
 
NC_012560  Avin_24380  aerotaxis receptor Aer  41.35 
 
 
567 aa  382  1e-105  Azotobacter vinelandii DJ  Bacteria  normal  0.0650163  n/a   
 
 
-
 
NC_010002  Daci_2372  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.35 
 
 
579 aa  382  1e-104  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS03711  methyl-accepting chemotaxis transducer transmembrane protein  44.26 
 
 
529 aa  372  1e-102  Ralstonia solanacearum GMI1000  Bacteria  normal  0.784638  normal  0.611118 
 
 
-
 
NC_007974  Rmet_3682  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.81 
 
 
552 aa  374  1e-102  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0302709 
 
 
-
 
NC_010002  Daci_5286  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.19 
 
 
519 aa  373  1e-102  Delftia acidovorans SPH-1  Bacteria  normal  0.982796  normal 
 
 
-
 
NC_008782  Ajs_3295  methyl-accepting chemotaxis sensory transducer  42.77 
 
 
519 aa  374  1e-102  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1684  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.84 
 
 
525 aa  366  1e-100  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4064  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.43 
 
 
529 aa  367  1e-100  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_3951  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.43 
 
 
529 aa  367  1e-100  Ralstonia pickettii 12J  Bacteria  normal  0.226395  normal 
 
 
-
 
NC_010524  Lcho_1520  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.28 
 
 
543 aa  362  7.0000000000000005e-99  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.112151 
 
 
-
 
NC_007908  Rfer_0120  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.5 
 
 
519 aa  358  9.999999999999999e-98  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2648  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.21 
 
 
520 aa  353  2.9999999999999997e-96  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2452  PAS  37.31 
 
 
518 aa  300  5e-80  Ralstonia eutropha JMP134  Bacteria  normal  0.952184  n/a   
 
 
-
 
NC_008752  Aave_3923  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.93 
 
 
524 aa  282  1e-74  Acidovorax citrulli AAC00-1  Bacteria  normal  0.11075  normal  0.0878902 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  48.6 
 
 
584 aa  280  3e-74  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0831  methyl-accepting chemotaxis sensory transducer  50 
 
 
561 aa  277  4e-73  Acidovorax citrulli AAC00-1  Bacteria  normal  0.236088  normal  0.180731 
 
 
-
 
NC_008752  Aave_1344  methyl-accepting chemotaxis sensory transducer  50.83 
 
 
536 aa  271  2e-71  Acidovorax citrulli AAC00-1  Bacteria  normal  0.129873  normal  0.199885 
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  48.79 
 
 
554 aa  268  2.9999999999999995e-70  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  49.17 
 
 
589 aa  267  2.9999999999999995e-70  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  50 
 
 
597 aa  266  5e-70  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  46.27 
 
 
594 aa  264  2e-69  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_011992  Dtpsy_3481  methyl-accepting chemotaxis sensory transducer  47.87 
 
 
674 aa  264  3e-69  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4123  methyl-accepting chemotaxis sensory transducer  47.87 
 
 
674 aa  264  3e-69  Acidovorax sp. JS42  Bacteria  normal  0.162807  normal  0.87643 
 
 
-
 
NC_010002  Daci_5082  methyl-accepting chemotaxis sensory transducer  49.54 
 
 
589 aa  264  4e-69  Delftia acidovorans SPH-1  Bacteria  normal  0.678642  normal  0.0204532 
 
 
-
 
NC_011992  Dtpsy_2969  methyl-accepting chemotaxis sensory transducer  49.69 
 
 
550 aa  263  4e-69  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  45.48 
 
 
583 aa  263  4e-69  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_008825  Mpe_A2780  aerotaxis sensor receptor  32.63 
 
 
564 aa  263  6e-69  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4027  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.92 
 
 
521 aa  261  1e-68  Pseudomonas putida GB-1  Bacteria  normal  0.664053  normal  0.0821551 
 
 
-
 
NC_008786  Veis_0400  methyl-accepting chemotaxis sensory transducer  48.54 
 
 
602 aa  261  2e-68  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0817302 
 
 
-
 
NC_008782  Ajs_3659  methyl-accepting chemotaxis sensory transducer  49.38 
 
 
550 aa  261  2e-68  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
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