| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_0629 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 664688 |
|---|
| End bp | 666208 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
|---|
| Protein accession | ACX38316 |
|---|
| Protein GI | 260447894 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCTC ATCCGTATGT CACCCAGCAA AATACCCCGC TGGCGGACGA TACCACTCTG
ATGTCCACTA CCGATCTGCA AAGCTATATC ACTCATGCTA ATGACACTTT TGTGCAGGTG
AGCGGCTATA CCTTGCAAGA GTTACAAGGG CAGCCGCACA ACATGGTGCG TCACCCGGAT
ATGCCAAAAG CGGCGTTTGC GGATATGTGG TTCACCCTGA AAAAAGGGGA GCCCTGGAGC
GGCATCGTGA AAAATCGCCG CAAAAATGGT GACCATTATT GGGTGCGGGC CAATGCGGTA
CCGATGGTGC GCGAGGGAAA AATCAGTGGC TATATGTCGA TTCGTACCCG GGCGACGGAT
GAAGAGATCG CGGCGGTGGA GCCGCTGTAC AAAGCGTTGA ACGCCGGACG TACCAGTAAG
CGTATTCATA AAGGCCTGGT GGTGCGTAAA GGCTGGCTGG GTAAACTGCC TTCATTACCG
CTTCGCTGGC GGGCGCGTGG AGTGATGACC CTGATGTTTA TCTTGCTGGC GGCCATGCTT
TGGTTTGTTG CTGCCCCGGT GGTGACGTAT ATCCTCTGTG CGTTAGTGGT ATTGTTGGCA
AGCGCCTGTT TTGAATGGCA GATTGTGCGC CCGATAGAAA ATGTTGCCCA TCAGGCACTG
AAGGTGGCGA CCGGAGAACG TAATAGTGTT GAGCATCTGA ATCGCAGCGA TGAGCTGGGG
CTGACATTAC GTGCGGTAGG GCAACTTGGC CTGATGTGCC GTTGGCTAAT TAACGATGTC
TCAAGCCAGG TGTCCAGTGT CAGAAATGGC AGTGAGACGC TGGCGAAAGG CACCGATGAA
CTGAACGAAC ATACCCAGCA GACAGTTGAT AACGTTCAGC AAACGGTGGC GACCATGAAC
CAAATGGCGG CGTCGGTGAA ACAGAACTCT GCCACGGCGT CGGCTGCCGA TAAACTGTCA
ATCACTGCCA GTAATGCGGC AGTGCAGGGT GGGGAGGCGA TGACCACGGT GATCAAGACA
ATGGACGATA TCGCCGACAG TACCCAGCGC ATTGGCACCA TTACTTCGCT GATTAACGAT
ATTGCGTTTC AGACCAATAT TCTGGCCCTG AATGCGGCGG TGGAAGCGGC GCGTGCCGGC
GAACAGGGCA AAGGTTTTGC AGTGGTGGCA GGGGAAGTGC GTCATTTAGC CAGCCGCAGC
GCTAATGCTG CCAACGATAT TCGCAAGCTG ATTGATGCCA GTGCTGATAA GGTGCAATCC
GGTTCGCAGC AGGTACACGC CGCCGGACGG ACGATGGAAG ATATTGTGGC ACAGGTGAAA
AACGTCACCC AGTTGATCGC CCAGATTAGC CATTCAACGC TGGAACAGGC CGATGGGCTT
TCCAGCCTGA CCCGTGCAGT GGATGAGCTT AACCTGATCA CCCAGAAAAA TGCCGAGCTG
GTGGAAGAGA GTGCGCAGGT GTCGGCGATG GTGAAACACC GCGCCAGCCG ACTGGAAGAC
GCGGTGACGG TACTGCATTA A
|
|---|
| Protein sequence | MSSHPYVTQQ NTPLADDTTL MSTTDLQSYI THANDTFVQV SGYTLQELQG QPHNMVRHPD
MPKAAFADMW FTLKKGEPWS GIVKNRRKNG DHYWVRANAV PMVREGKISG YMSIRTRATD
EEIAAVEPLY KALNAGRTSK RIHKGLVVRK GWLGKLPSLP LRWRARGVMT LMFILLAAML
WFVAAPVVTY ILCALVVLLA SACFEWQIVR PIENVAHQAL KVATGERNSV EHLNRSDELG
LTLRAVGQLG LMCRWLINDV SSQVSSVRNG SETLAKGTDE LNEHTQQTVD NVQQTVATMN
QMAASVKQNS ATASAADKLS ITASNAAVQG GEAMTTVIKT MDDIADSTQR IGTITSLIND
IAFQTNILAL NAAVEAARAG EQGKGFAVVA GEVRHLASRS ANAANDIRKL IDASADKVQS
GSQQVHAAGR TMEDIVAQVK NVTQLIAQIS HSTLEQADGL SSLTRAVDEL NLITQKNAEL
VEESAQVSAM VKHRASRLED AVTVLH
|
|---|
| |