Gene SeSA_A3407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3407 
Symbol 
ID6517819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3290282 
End bp3291802 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content55% 
IMG OID642748401 
Productaerotaxis receptor 
Protein accessionYP_002116173 
Protein GI194737278 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCTC ATCCCTACGT CAGCCAGCTA AATACCCCGC TGGATGATGA TACCACTCTG 
ATGTCTACGA CCGACCTGGA AAGCTATATC ACTCACGCCA ATGACACTTT TGTCCAGGTG
AGCGGCTATC AGTTAAACGA GTTACTGGCG CAGCCACATA ATCTGGTGCG TCATCCGGAT
ATGCCGAAAG CTGCCTTCGC AGATATGTGG TACACCCTAA AACAGGGCGA ACCGTGGAGC
GGCATTGTGA AAAACCGGCG TAAAAACGGC GACCATTACT GGGTGCGGGC CAACGCGGTA
CCGATGATAC GTGAAGGGCG TGTGACGGGA TATATGTCGA TCCGTACCCG CGCCACGGAT
GATGAGATTG CCGCCGTTGA GCCTTTATAT CAGGCGCTAA ATGAAGGGCG GTGTAATAAA
CGTATTCATA AAGGCCTGGT GGTTCGTCAG GGTTTGCTGG GCAAACTGCC CGCTATGCCT
GTTCGCTGGC GAGTGCGTAG CATTATGGGG CTAATGGCCG TAATGCTGGC GTTGGCTCTG
TTCGGTACGG ATGCGTCATG GCAGGCGTTG CTGTTGGGCG CGTTGGCGAT GCTGGCAGGT
ACGGCGCTAT TTGAATGGCA AATTGTGCGT CCCATTGAAA ATGTGGCGAC GCAGGCGCTG
AAAGTGGCGA CCGGCGAACG CAACAGCGTA CAACATCTTA ATCGTAGCGA TGAGTTGGGG
CTGACGCTGA GGGCCGTAGG GCAGCTTGGC TTGATGTGCC GCTGGCTGAT CAATGACGTA
TCAAGTCAGG TTTCCAGCGT CAGAAACGGC AGTGAAAGGC TGGCGAAGGG TAACAATGAT
CTGAACGAAC ACACCCGTCA GACCGTGGAG AATGTTCAGG AAACGGTAAC GACCATGAAC
CAGATGGCGG AGTCCGTGAA GCTCAATTCC GAGACGGCTT CCGCTGCGGA TAAGCTTTCC
ATGGCGGCCA GTAGCGCGGC GACTCAGGGA GGTGAGGCGA TGGATACGGT GATTAAAACG
ATGGATGATA TCGCTCACAG TACGCAACGT ATCGGGACGA TCACCACGCT AATTAACGAT
ATCGCTTTTC AGACGAATAT CCTGGCGCTG AATGCGGCGG TAGAAGCGGC GAGAGCGGGC
GAGCAGGGGA AAGGGTTTGC CGTGGTTGCT GGCGAGGTAC GCCATCTTGC CAGCCGCAGC
GCTAACGCGG CGAACGATAT TCGTAAATTA ATTGACGCCA GCGCAACAAA GGTGCAGTCA
GGCTCCGAGC AGGTTCACGC CGCAGGCCGT ACCATGGATG ACATTGTAGC CCAGGTGCAA
AATGTCACCC TGCTTATCGC ACGTATCAGT CAGTCGACGC AGGAACAGAC AGATGGGCTT
TCCAGCCTGA CTCGCGCCGT GGACGAGTTG AACCGCATAA CCCAGAAAAA TGCGGCGCTG
GTGGAAGAGA GCGCACAAGT CTCCGCAATG GTAAAACACC GTGCCAGCCG GCTGGAGGAT
GCGGTCACGG TACTGCATTA A
 
Protein sequence
MSSHPYVSQL NTPLDDDTTL MSTTDLESYI THANDTFVQV SGYQLNELLA QPHNLVRHPD 
MPKAAFADMW YTLKQGEPWS GIVKNRRKNG DHYWVRANAV PMIREGRVTG YMSIRTRATD
DEIAAVEPLY QALNEGRCNK RIHKGLVVRQ GLLGKLPAMP VRWRVRSIMG LMAVMLALAL
FGTDASWQAL LLGALAMLAG TALFEWQIVR PIENVATQAL KVATGERNSV QHLNRSDELG
LTLRAVGQLG LMCRWLINDV SSQVSSVRNG SERLAKGNND LNEHTRQTVE NVQETVTTMN
QMAESVKLNS ETASAADKLS MAASSAATQG GEAMDTVIKT MDDIAHSTQR IGTITTLIND
IAFQTNILAL NAAVEAARAG EQGKGFAVVA GEVRHLASRS ANAANDIRKL IDASATKVQS
GSEQVHAAGR TMDDIVAQVQ NVTLLIARIS QSTQEQTDGL SSLTRAVDEL NRITQKNAAL
VEESAQVSAM VKHRASRLED AVTVLH