| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2113 |
|---|
| Symbol | |
|---|
| ID | 4665789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 2322467 |
|---|
| End bp | 2324119 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639823321 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
|---|
| Protein accession | YP_970468 |
|---|
| Protein GI | 120610790 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTCA ACCTTCCCGT CACCACCCAG GAATACCCCT TCCCACGGGG CGAGACACTG
GTTTCCACCA CCGACCTGCA AGGGCGCATC CTCTACTGCA ATCCCATGTT CGTGGAGGTG
AGCGGGTACG AGCGCGCCGA GCTGCTGGGC CAGCCGCACA ACATGATCCG CCACCCGGAC
ATGCCGGAAG AGGCGTTCCG CGACATGTGG GAAACCATCG CCGCCGGGTG GCCGTGGTCC
GCCGCGGTGA AGAACCGCCG CAAGGACGGC ACTTACTACT GGGTCATGGC CAACGTCACG
CCGCTGATGG AGGACGGGCG CCCGGTGGGA TACATGTCCG TGCGCACCGA GGCCTCGCGC
GAGCAGATCG CGGACGCGGA AGCGCTCTAC GGCCGGATGC GCGCGGAGAA GCAGGCCGGC
CGCATGGTGC ATGCGCTGCA GCGGGGCCGG GTCGTGCGCA GGACGCTGTC CGGACGCATC
CGCCAGGCGT TGGAGATCGG CCTGGGCGGG CAGGTGGCCA TGGCCTTCGC TGCCGTATGG
CTGGCGGCGT TCCTCGCGGG ACTCGTGGAC CAGGAATCGG GCATGTTCTC CGCGCTGGCG
TGGCTGGCCG CCGCCGGCGT GGCCCTGGGC GGATTCGCAT GGGTGCGCCG CACCGCCGTG
CTGCCGCTCG TCGCCATGGT GGGGGCTGCC AACCGGATGG CGGCCGGCGA CCTCACGCAG
AGCGTCACCG TGACGCGCAC CGGCCTGACC GGCGAACTGC AGCGCGCGCT CGCGCAGCTC
AACGTCAATC TGCTGTCCAT CGTGCGCGAC GCCCGGCAGG AGAGCGACAA GATGCGCATG
TCGAGCCGCG AGATCGCGCA GGGCAACCAG GAGCTGTCTT CCCGCACCGA GAACCAGGCG
AGCAATCTGC AGCAGACGGC CGCCTCGATG GAGGAGATCA CCGGCACCGT CAAGCAGACC
GCCGACTCCG CGCGCCAAGC CAGCGAACTC GCCCAGCAGG CCACCGGCGT GGCCGAGCGC
ACCAGCGGCG CGGTGGAAGA GGTGGCCGCG ACCATGCGCG AGATCCAGAC CTCGTCCGGC
CGCATCGGCG AAATCACCGG GCTGATCGAT TCCATCGCCT TCCAGACCAA CATCCTCGCG
CTGAACGCGG CCGTGGAGGC GGCGCGCGCG GGCGAGCACG GCCGCGGCTT CGCCGTGGTG
GCCGCCGAGG TGCGCAGCCT GTCGCAGCGC ACACAGTCCG CCGCCAAGGA AATCCGCCAA
CTGATCGAGG AATCCGCGGC GCGGGTGGGC GAGGGCCACG CGCGCACCGA TGGTGCCCGC
CGGACCATGC AGGAATCGCT CGAACTGGTG CGCCGCGTGG GCGTGTTCAT CGGGGAGATC
CACAGCGCCT CGAACGAGCA GCTCTCGGGC ATCTCGCAGG TGAATGCGGC CGTTGCCCAA
CTGGACACCA TCACCCAGCA GAACGCGGCG CTGGTGGAGG AGAGCGCGGC TCTGGCCATC
GAACTGGAAC GGCAGGCGCA GACCGTGTCG GAGTCGGTGC AGGTGTTCCG CCTGGACCGG
GGGCCCCGCG CCGCCGCGCC CGACGCCGTG GCCCTGCGCA AGGCGGCCAA GGCCGGCAGG
GCCACCGCCG CGGCACTGCC CGCGCTGCGC TGA
|
|---|
| Protein sequence | MRVNLPVTTQ EYPFPRGETL VSTTDLQGRI LYCNPMFVEV SGYERAELLG QPHNMIRHPD
MPEEAFRDMW ETIAAGWPWS AAVKNRRKDG TYYWVMANVT PLMEDGRPVG YMSVRTEASR
EQIADAEALY GRMRAEKQAG RMVHALQRGR VVRRTLSGRI RQALEIGLGG QVAMAFAAVW
LAAFLAGLVD QESGMFSALA WLAAAGVALG GFAWVRRTAV LPLVAMVGAA NRMAAGDLTQ
SVTVTRTGLT GELQRALAQL NVNLLSIVRD ARQESDKMRM SSREIAQGNQ ELSSRTENQA
SNLQQTAASM EEITGTVKQT ADSARQASEL AQQATGVAER TSGAVEEVAA TMREIQTSSG
RIGEITGLID SIAFQTNILA LNAAVEAARA GEHGRGFAVV AAEVRSLSQR TQSAAKEIRQ
LIEESAARVG EGHARTDGAR RTMQESLELV RRVGVFIGEI HSASNEQLSG ISQVNAAVAQ
LDTITQQNAA LVEESAALAI ELERQAQTVS ESVQVFRLDR GPRAAAPDAV ALRKAAKAGR
ATAAALPALR
|
|---|
| |