Gene SeAg_B3403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B3403 
Symbol 
ID6795282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand
Start bp3305685 
End bp3307205 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content56% 
IMG OID642777542 
Productaerotaxis receptor 
Protein accessionYP_002148146 
Protein GI197251726 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCTC ATCCCTACGT CAGCCAGCTA AATACTCCGC TGGATGATGA TACCACTCTG 
ATGTCTACGA CCGACCTGGA AAGCTATATC ACTCACGCCA ATGACACTTT TGTCCAGGTG
AGCGGCTATC AGTTAAACGA GTTACTGGCG CAGCCACATA ATCTGGTGCG TCATCCGGAT
ATGCCGAAAG CTGCCTTCGC AGATATGTGG TACACCCTAA AACAGGGCGA ACCGTGGAGC
GGCATTGTGA AAAACCGGCG TAAAAACGGC GACCATTACT GGGTGCGGGC CAACGCGGTA
CCGATGATAC GTGAAGGGCG TGTGACGGGA TATATGTCGA TCCGTACCCG CGCCACGGAT
GATGAGATTG CCGCCGTCGA GCCTTTATAT CAGGCGCTAA ATGAAGGGCG GTGTAGTAAA
CGTATTCATA AAGGCCTGGT GGTTCGTCAG GGCTTGCTGG GCAAACTGCC CGCTATGCCT
GTTCGCTGGC GAGTGCGTAG TATTATGGGG CTAATGGCCG TAATGCTGGC GTTGGCGCTG
TTCGGTACGG ATGCCTCATG GCAGGCGTTG CTGTTGGGCG CGTTGGCGAT GCTGGCAGGT
ACGGCGCTAT TTGAATGGCA AATTGTGCGT CCCATTGAAA ATGTGGCGAC GCAGGCGCTG
AAAGTGGCGA CCGGCGAACG CAACAGCGTA CAACATCTTA ATCGCAGCGA TGAGTTGGGG
CTGATGCTGA GGGCCGTGGG GCAGCTTGGC TTGATGTGCC GCTGGCTGAT CAATGACGTA
TCAAGTCAGG TTTCCAGCGT CAGAAACGGC AGTGAAAGGC TGGCGAAGGG TAACAATGAT
CTGAACGAAC ACACCCGTCA GACCGTGGAG AATGTTCAGG AAACGGTAAC GACCATGAAC
CAGATGGCGG AGTCCGTGAA GCTCAATTCC GAGACGGCTT CCGCTGCGGA TAAGCTTTCC
ATGGCGGCCA GTAGCGCGGC GACTCAGGGA GGTGAGGCGA TGGATACGGT GATTAAAACG
ATGGATGATA TCGCTCACAG TACGCAACGT ATCGGGACGA TCACCACGCT AATTAACGAT
ATCGCTTTTC AGACGAATAT CCTGGCGCTG AATGCGGCGG TAGAAGCGGC GAGAGCAGGC
GAGCAGGGGA AAGGGTTTGC CGTGGTTGCT GGCGAGGTAC GCCATCTTGC CAGCCGCAGC
GCTAACGCGG CGAACGATAT TCGTAAATTA ATTGACGCCA GCGCAACAAA GGTGCAGTCA
GGCTCCGAGC AGGTTCACGC CGCAGGCCGT ACCATGGATG ACATTGTAGC CCAGGTGCAA
AATGTCACCC TGCTTATCGC ACGGATCAGC CAGTCGACGC AGGAACAGAC AGATGGGCTT
TCCAGCCTGA CTCGCGCCGT GGACGAGTTG AACCGCATAA CCCAGAAGAA TGCGGCGCTG
GTGGAAGAGA GCGCACAAGT CTCCGCGATG GTAAAACACC GTGCCAGCCG GCTGGAGGAT
GCGGTCACGG TACTGCATTA A
 
Protein sequence
MSSHPYVSQL NTPLDDDTTL MSTTDLESYI THANDTFVQV SGYQLNELLA QPHNLVRHPD 
MPKAAFADMW YTLKQGEPWS GIVKNRRKNG DHYWVRANAV PMIREGRVTG YMSIRTRATD
DEIAAVEPLY QALNEGRCSK RIHKGLVVRQ GLLGKLPAMP VRWRVRSIMG LMAVMLALAL
FGTDASWQAL LLGALAMLAG TALFEWQIVR PIENVATQAL KVATGERNSV QHLNRSDELG
LMLRAVGQLG LMCRWLINDV SSQVSSVRNG SERLAKGNND LNEHTRQTVE NVQETVTTMN
QMAESVKLNS ETASAADKLS MAASSAATQG GEAMDTVIKT MDDIAHSTQR IGTITTLIND
IAFQTNILAL NAAVEAARAG EQGKGFAVVA GEVRHLASRS ANAANDIRKL IDASATKVQS
GSEQVHAAGR TMDDIVAQVQ NVTLLIARIS QSTQEQTDGL SSLTRAVDEL NRITQKNAAL
VEESAQVSAM VKHRASRLED AVTVLH