| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1224 |
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| Symbol | aer |
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| ID | 1223536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1558218 |
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| End bp | 1559762 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637241089 |
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| Product | aerotaxis sensor receptor transmembrane protein |
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| Protein accession | NP_522785 |
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| Protein GI | 17549445 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.229455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.54431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTCA ACGAACCCGT TACCCAGCGT GAATATGAGT TCCCGGACAA CGCGACGCTC
ATGTCGACCA CCGATACGCA GAGCTACATT GCCTATGCGA ATGCGGCGTT CGTCGACGTC
AGCGGTTTTT CCCGGGAGGA GATCGAGGGC CAGCCGCACA ATATCGTGCG CCACCCGGAC
ATGCCGCCCG AGGCGTTTGC CGACATGTGG GCCACGCTCA AGGGCGGCGA GCCCTGGAGC
GCGCTGGTCA AGAACCGCCG CAAGAACGGC GATCACTATT GGGTGCGCGC CAATGCCACG
CCGGTGGTGC GCAACGGGCG GCCGGCCGGC TACATGTCCG TGCGGACCAA GCCCACGCGC
GACGAGGTGG CGGCGGCCGA GGCGCTCTAC CGCGATTTCC GCGCCGGCCG GGCCGGCAGC
CGCACCTTCC ACAAGGGCCT GATCGTGCGG ACCGGGCTGA TGGCCTGGCG CTCGGTCTTC
CAGGTCATGC CGGTGCGCTG GCGCATCCGC CTGGCGTTCA TGGTGCTGCT GCCGCTGACG
CTGGGGGCGG CCTGGGGCGC GGGCTTGTCC GGCGCGGCGC TCGGCGGCTT TGCCGCCGCG
CAGGCGGTGG CGCTGGCGCT GGGGGCCGGG TGGCTGCAGG CGCAGATCGC CCGGCCGCTC
GAACAGACGC TGCAGCAGGC GCTGCGCGTG GCGTCGGGCG AGAGCCAGAA GGCGGTGCTC
ATGGACCGCG TCGACGAGAT CGGCATGACG CTGCGGACCA TCAGCCAGCT CGGCCTGATG
TTTCGCTGGC TGATCGACGA CGTCAGCGAA CAGGTGCTCA ACGTCCAGGC CGCCAGCCAG
GAGATCGCCC AGGACAACAG CGACATCAAC GCGCGCACCG AGCAGGCGGC CTCCAGCGTG
CAGCAGACCT CCAGCTCGAT GACGCAGATG ACGGCCACCG TGGCCAGCAA CGCCGAGACC
GCGGGCGAGG CCAACCAGCT CTCGGGCGCC GCGACCGAGG CGGCCGTCAA CGGCGGCCGC
GCCATGGCCG AGGTGGTCGC CACCATGGAG TCGATCTCGC AGAGCGCCAA CCAGATCGCC
GACATCATCG GCGTGATCGA CAGCATTGCG TTCCAGACCA ATATCCTGGC GCTCAACGCG
GCGGTGGAGG CGGCGCGCGC GGGCGAGCAG GGCCGGGGTT TCGCGGTGGT GGCCGGCGAG
GTGCGGGCGC TGGCGCAGCG CAGCGCCAGC GCGGCCCGGG AGATCAAGGA TCTGATCGGC
GCCAGCGTGG GCAAGGTGGC GTCCGGCTCG CGGCTGGTCG GCGAGGCCGG CAAGACCATG
GATGACATCG TCAGCCAGGT CAAGCGCGTC TCGGGCATGA TTGCCGAGAT CAGCCTGGCG
ACCGCGGAGC AGACCGACGG CATCATGCAG GTGAGTCAGG CTGTCACGCA CCTGGACCAG
ATCACGCAGG AGAACGCCAC GCTGGTGGAG CAGAGCGCCC TGGCGGCGGA GAGCCTGCGG
GTGCAGGCGA CCCGTCTCGT GGAAGCCGTC GGCGTGTTCC GCTGA
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| Protein sequence | MRVNEPVTQR EYEFPDNATL MSTTDTQSYI AYANAAFVDV SGFSREEIEG QPHNIVRHPD
MPPEAFADMW ATLKGGEPWS ALVKNRRKNG DHYWVRANAT PVVRNGRPAG YMSVRTKPTR
DEVAAAEALY RDFRAGRAGS RTFHKGLIVR TGLMAWRSVF QVMPVRWRIR LAFMVLLPLT
LGAAWGAGLS GAALGGFAAA QAVALALGAG WLQAQIARPL EQTLQQALRV ASGESQKAVL
MDRVDEIGMT LRTISQLGLM FRWLIDDVSE QVLNVQAASQ EIAQDNSDIN ARTEQAASSV
QQTSSSMTQM TATVASNAET AGEANQLSGA ATEAAVNGGR AMAEVVATME SISQSANQIA
DIIGVIDSIA FQTNILALNA AVEAARAGEQ GRGFAVVAGE VRALAQRSAS AAREIKDLIG
ASVGKVASGS RLVGEAGKTM DDIVSQVKRV SGMIAEISLA TAEQTDGIMQ VSQAVTHLDQ
ITQENATLVE QSALAAESLR VQATRLVEAV GVFR
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