| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0070 |
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| Symbol | |
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| ID | 5134742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 73628 |
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| End bp | 75271 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640530393 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_001214911 |
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| Protein GI | 147671767 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.740118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCAGT TACTCAGCGG CTTGTCTATC AAGCTGCAGG TTGTAGTACC GGTATTTTTC
ACTCTGTTGT TACTGATCAT TGGCATTACC TTCAGTACCT CCAGCTTAAA AACCGCCTTC
CACCAAGTTA CCGTCTCTAC TGAACAACTC ATCACCGATA AAGATAATCT CACCACTCTG
ATTGATAACA CGTATGCGAT GCGCATCAGC GCCATTTATA GTCTGTTCCG TCCCGCTGAA
GTGACCGCCC TTCCTAACGT TCTTAAAGAA AAACAAACCG AAAACTTGGC GCTCTTACGC
AGCCTTGCGG ATAATCCCGA ACTGAAAAAT GAAGTCGCAG GGCTTACACA AGCTATGCAG
CGTTATGTGG ATTACTCGAT TCAAACCATG ATCCCATTAC TGAACATCGA ACACAGTGAC
CAAGAGAAAG ACGAGCGATT TACCGCCCAG TATGAACAGG CCACCGCAGA ATATCGCAAG
GTGGGCAATG AGATGATTAA AGCCATCGAT GTGCTATCCA ATCGCTTAAA CCAAGTGGCT
ATGACGACCA TTGATGAGAG TGAGCATGAG CACGATTCAG TCATGTCTCA ATCCACGTTT
GCTTTAATCG GTATTTTACT GGTCGCTGCG CTAAGTAGTT GGCTACTGGC GGGCATCATT
GTCACCCCAA TTCGTCAGTT GCAACAAACG GTACGTGAAA TCGCAAAAGG TAATTTACTG
GTTAAAGCCC AAGAAGAGGG CAATAACGAA ATCACCCTTC TGGCCCGTGA TGTCAACGCC
ACGGTGACTC AACTGCGCCA AACGGTAGAG AGCTTAGTGC GCATCAGTAC CGATGTCGCT
TCTGCCTCAA CCGAATTAGC GACGGTGATG ACTCAAGCCA GTGTCAACTC CGATCAAGAG
AAACAGGAAG TTGAACAAGT GGCTTCAGCC GTCAACCAGC TGCAAAGCAC CGCACAAAGT
GTGACTGATC ATGCACACAG TGCGGATGGC GCAGCACAAC AAGCCAACCA ACTGGCATCT
CAAAGCTTAC GGATGTTTGA AGAGAGCCAC CGCGCAACCG CGAAAATGGC TGACCAACTC
AGAGAAGCCG CACAAGTGGT CAATCAACTG AAGGAGCAAT CTGAACGCAT TGGTAATGTA
ACAGAAGTGA TCCGTAGTAT TTCTGAGCAG ACAAACCTTC TGGCACTGAA TGCCGCGATT
GAAGCGGCTC GCGCGGGAGA AAGCGGACGC GGATTTGCTG TAGTAGCCGA TGAAGTGCGT
ATGTTAGCCG CGCGTACACA GACCTCGACT CAAGAGATCC AAGCCATTAT TGAAGAGCTG
CAAAACCAAT CCAATACCGC TAACAGCAGT ATGCATTCAA GCTTAAGCCT GCTTGAGCAA
AACCAATCTT TAGCAGCCAA AGTCAGTGCA TCTCTCACTG AAATCAATCA TTCGATCAGT
GCCTTGGGTC AGATCAACGC GCAAGTGGCA ACCGCTTCCG AAGAACAAAG CCAAGTGACC
AAAGACATCA ACCGCAACCT CAGCAATATT TATGAACTGG TTAGCCAAAA TGTGACTGGC
ATTACTCAAT CAGCAGCAGC AAGCCATGAG CTGTCCGACC TTGCCGAGCA GCAACACCAG
CAGCTCCAGT ATTTTCGCGT GTAA
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| Protein sequence | MRQLLSGLSI KLQVVVPVFF TLLLLIIGIT FSTSSLKTAF HQVTVSTEQL ITDKDNLTTL
IDNTYAMRIS AIYSLFRPAE VTALPNVLKE KQTENLALLR SLADNPELKN EVAGLTQAMQ
RYVDYSIQTM IPLLNIEHSD QEKDERFTAQ YEQATAEYRK VGNEMIKAID VLSNRLNQVA
MTTIDESEHE HDSVMSQSTF ALIGILLVAA LSSWLLAGII VTPIRQLQQT VREIAKGNLL
VKAQEEGNNE ITLLARDVNA TVTQLRQTVE SLVRISTDVA SASTELATVM TQASVNSDQE
KQEVEQVASA VNQLQSTAQS VTDHAHSADG AAQQANQLAS QSLRMFEESH RATAKMADQL
REAAQVVNQL KEQSERIGNV TEVIRSISEQ TNLLALNAAI EAARAGESGR GFAVVADEVR
MLAARTQTST QEIQAIIEEL QNQSNTANSS MHSSLSLLEQ NQSLAAKVSA SLTEINHSIS
ALGQINAQVA TASEEQSQVT KDINRNLSNI YELVSQNVTG ITQSAAASHE LSDLAEQQHQ
QLQYFRV
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