More than 300 homologs were found in PanDaTox collection
for query gene Sde_3111 on replicon NC_007912
Organism: Saccharophagus degradans 2-40



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007912  Sde_3111  putative methyl-accepting chemotaxis sensory transducer  100 
 
 
397 aa  801    Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_0759  methyl-accepting chemotaxis sensory transducer  32.62 
 
 
406 aa  149  1.0000000000000001e-34  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0155  methyl-accepting chemotaxis protein  39.39 
 
 
384 aa  148  2.0000000000000003e-34  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_2159  methyl-accepting chemotaxis sensory transducer  28.82 
 
 
414 aa  146  5e-34  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_01024  chemotaxis protein  31.96 
 
 
366 aa  134  1.9999999999999998e-30  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0730182  n/a   
 
 
-
 
NC_010717  PXO_06142  chemotaxis protein  31.96 
 
 
366 aa  134  1.9999999999999998e-30  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0352354  n/a   
 
 
-
 
NC_011071  Smal_1917  methyl-accepting chemotaxis sensory transducer  34.32 
 
 
396 aa  125  1e-27  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.386674 
 
 
-
 
NC_008576  Mmc1_3578  methyl-accepting chemotaxis sensory transducer  31.72 
 
 
331 aa  111  2.0000000000000002e-23  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0724  chemotaxis sensory transducer  26.63 
 
 
405 aa  108  2e-22  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.435605 
 
 
-
 
NC_008463  PA14_02270  putative chemotaxis transducer  34.69 
 
 
390 aa  107  3e-22  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.319109  normal 
 
 
-
 
NC_009656  PSPA7_0260  putative chemotaxis transducer  34.18 
 
 
391 aa  107  5e-22  Pseudomonas aeruginosa PA7  Bacteria  normal  0.237341  n/a   
 
 
-
 
NC_011138  MADE_00410  methyl-accepting chemotaxis protein  36.52 
 
 
394 aa  104  2e-21  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3125  chemotaxis sensory transducer  23.31 
 
 
407 aa  100  3e-20  Dechloromonas aromatica RCB  Bacteria  normal  0.443773  normal 
 
 
-
 
NC_011662  Tmz1t_1314  methyl-accepting chemotaxis sensory transducer  34.39 
 
 
426 aa  98.6  2e-19  Thauera sp. MZ1T  Bacteria  normal  0.116934  n/a   
 
 
-
 
NC_009052  Sbal_2106  methyl-accepting chemotaxis sensory transducer  26.02 
 
 
380 aa  96.7  7e-19  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3295  methyl-accepting chemotaxis sensory transducer  37.41 
 
 
384 aa  96.3  9e-19  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2117  methyl-accepting chemotaxis protein  32.97 
 
 
377 aa  95.9  1e-18  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010003  Pmob_0861  methyl-accepting chemotaxis sensory transducer  37.11 
 
 
689 aa  94.7  2e-18  Petrotoga mobilis SJ95  Bacteria  normal  0.63678  n/a   
 
 
-
 
NC_008740  Maqu_2789  methyl-accepting chemotaxis sensory transducer  41.22 
 
 
545 aa  93.6  6e-18  Marinobacter aquaeolei VT8  Bacteria  normal  0.888266  n/a   
 
 
-
 
NC_009616  Tmel_1816  methyl-accepting chemotaxis sensory transducer  35.64 
 
 
514 aa  92.8  8e-18  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0975  methyl-accepting chemotaxis protein  35.15 
 
 
365 aa  92.4  1e-17  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.245078  n/a   
 
 
-
 
NC_009901  Spea_2398  methyl-accepting chemotaxis sensory transducer  38.65 
 
 
656 aa  92  2e-17  Shewanella pealeana ATCC 700345  Bacteria  normal  0.201842  n/a   
 
 
-
 
NC_009718  Fnod_1100  methyl-accepting chemotaxis sensory transducer  37.65 
 
 
465 aa  91.7  2e-17  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.0274031  n/a   
 
 
-
 
NC_011663  Sbal223_2094  methyl-accepting chemotaxis sensory transducer  27.64 
 
 
380 aa  91.7  2e-17  Shewanella baltica OS223  Bacteria  normal  0.465964  normal 
 
 
-
 
NC_009665  Shew185_2251  methyl-accepting chemotaxis sensory transducer  27.64 
 
 
380 aa  91.7  2e-17  Shewanella baltica OS185  Bacteria  normal  0.0952292  n/a   
 
 
-
 
NC_009997  Sbal195_2368  methyl-accepting chemotaxis sensory transducer  35.21 
 
 
380 aa  91.3  3e-17  Shewanella baltica OS195  Bacteria  normal  0.0668336  normal  0.991447 
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  40.65 
 
 
627 aa  91.3  3e-17  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_009439  Pmen_0717  methyl-accepting chemotaxis sensory transducer  50 
 
 
654 aa  90.9  3e-17  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2097  methyl-accepting chemotaxis sensory transducer  36.69 
 
 
378 aa  90.5  5e-17  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1877  methyl-accepting chemotaxis sensory transducer  36.69 
 
 
378 aa  90.5  5e-17  Shewanella sp. MR-7  Bacteria  normal  0.410986  normal  0.95878 
 
 
-
 
NC_009457  VC0395_A1488  methyl-accepting chemotaxis protein  29.66 
 
 
672 aa  90.5  5e-17  Vibrio cholerae O395  Bacteria  normal  0.619219  n/a   
 
 
-
 
NC_009483  Gura_0476  methyl-accepting chemotaxis sensory transducer  29.92 
 
 
830 aa  89.7  7e-17  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4266  chemotaxis sensory transducer  39.79 
 
 
546 aa  89.7  8e-17  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.261421  normal 
 
 
-
 
NC_008577  Shewana3_1156  methyl-accepting chemotaxis sensory transducer  36.16 
 
 
523 aa  89.7  8e-17  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1226  methyl-accepting chemotaxis sensory transducer  36.16 
 
 
523 aa  89.7  9e-17  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_1278  methyl-accepting chemotaxis protein  37.58 
 
 
706 aa  89.4  1e-16  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_1334  methyl-accepting chemotaxis protein  39.67 
 
 
550 aa  89  1e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2909  methyl-accepting chemotaxis sensory transducer  37.58 
 
 
706 aa  89.4  1e-16  Shewanella sp. MR-4  Bacteria  normal  normal  0.307732 
 
 
-
 
NC_008322  Shewmr7_2991  methyl-accepting chemotaxis sensory transducer  37.58 
 
 
706 aa  89.4  1e-16  Shewanella sp. MR-7  Bacteria  normal  0.0750474  normal 
 
 
-
 
NC_008577  Shewana3_3088  methyl-accepting chemotaxis sensory transducer  37.58 
 
 
706 aa  89.4  1e-16  Shewanella sp. ANA-3  Bacteria  normal  0.0193815  hitchhiker  0.00820004 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  39.53 
 
 
716 aa  88.2  2e-16  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009654  Mmwyl1_3730  methyl-accepting chemotaxis sensory transducer  40.61 
 
 
529 aa  88.6  2e-16  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.000000264918 
 
 
-
 
NC_007005  Psyr_1150  chemotaxis sensory transducer  40 
 
 
551 aa  88.6  2e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2240  histidine kinase, HAMP region: chemotaxis sensory transducer  39.62 
 
 
537 aa  88.2  2e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.942924 
 
 
-
 
NC_009783  VIBHAR_00866  hypothetical protein  47.79 
 
 
418 aa  88.2  2e-16  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  37.36 
 
 
626 aa  88.2  2e-16  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1103  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
706 aa  89  2e-16  Shewanella putrefaciens CN-32  Bacteria  normal  0.540965  n/a   
 
 
-
 
NC_008577  Shewana3_2222  methyl-accepting chemotaxis sensory transducer  36.69 
 
 
378 aa  88.6  2e-16  Shewanella sp. ANA-3  Bacteria  normal  0.894674  normal 
 
 
-
 
NC_009831  Ssed_1066  methyl-accepting chemotaxis sensory transducer  37.34 
 
 
705 aa  88.2  2e-16  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  36.55 
 
 
541 aa  88.2  3e-16  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2100  chemotaxis sensory transducer  34.65 
 
 
537 aa  87.8  3e-16  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.517374  normal  0.435335 
 
 
-
 
NC_013456  VEA_004525  methyl-accepting chemotaxis protein  44.88 
 
 
418 aa  87.8  3e-16  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0515  methyl-accepting chemotaxis sensory transducer  32.79 
 
 
656 aa  88.2  3e-16  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2301  methyl-accepting chemotaxis sensory transducer  35.38 
 
 
705 aa  88.2  3e-16  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_0900  methyl-accepting chemotaxis sensory transducer  39.13 
 
 
655 aa  87.4  4e-16  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2475  methyl-accepting chemotaxis protein  39.31 
 
 
598 aa  87.4  4e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0390427  n/a   
 
 
-
 
NC_010483  TRQ2_0922  methyl-accepting chemotaxis sensory transducer  38.59 
 
 
656 aa  87.4  4e-16  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  41.18 
 
 
627 aa  87.4  4e-16  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  41.29 
 
 
545 aa  87.4  4e-16  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_007492  Pfl01_1418  chemotaxis sensory transducer  37.77 
 
 
541 aa  87.4  4e-16  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  35.86 
 
 
552 aa  87.4  4e-16  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  41.62 
 
 
712 aa  87.4  4e-16  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  41.62 
 
 
712 aa  87.4  4e-16  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009784  VIBHAR_05691  histidine kinase  41.73 
 
 
538 aa  87.4  4e-16  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_1066  methyl-accepting chemotaxis protein  37.65 
 
 
685 aa  87  5e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.395137  n/a   
 
 
-
 
NC_010501  PputW619_2319  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
546 aa  87  5e-16  Pseudomonas putida W619  Bacteria  normal  0.217936  normal 
 
 
-
 
NC_007005  Psyr_0913  histidine kinase, HAMP region: chemotaxis sensory transducer  37.65 
 
 
685 aa  87  5e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.724419  normal 
 
 
-
 
NC_007912  Sde_0391  methyl-accepting chemotaxis sensory transducer  33.18 
 
 
499 aa  87  5e-16  Saccharophagus degradans 2-40  Bacteria  normal  0.0811848  normal 
 
 
-
 
NC_009616  Tmel_0322  methyl-accepting chemotaxis sensory transducer  30.17 
 
 
662 aa  87  5e-16  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03718  putative chemotaxis sensory protein  39.86 
 
 
540 aa  86.7  6e-16  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0009  methyl-accepting chemotaxis sensory transducer  38.59 
 
 
661 aa  86.7  6e-16  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1621  methyl-accepting chemotaxis protein  39.71 
 
 
513 aa  86.7  7e-16  Colwellia psychrerythraea 34H  Bacteria  normal  0.113175  n/a   
 
 
-
 
NC_004578  PSPTO_3279  methyl-accepting chemotaxis protein  37.35 
 
 
541 aa  86.7  7e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.149652  n/a   
 
 
-
 
NC_011312  VSAL_I1951  methyl-accepting chemotaxis protein  40.77 
 
 
720 aa  86.7  7e-16  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3478  methyl-accepting chemotaxis sensory transducer with Cache sensor  26.71 
 
 
594 aa  86.7  7e-16  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.233037  n/a   
 
 
-
 
NC_009616  Tmel_1120  methyl-accepting chemotaxis sensory transducer  33.82 
 
 
664 aa  86.7  7e-16  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00177625  n/a   
 
 
-
 
NC_009616  Tmel_1776  methyl-accepting chemotaxis sensory transducer  33.82 
 
 
664 aa  86.7  7e-16  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1491  histidine kinase, HAMP region: chemotaxis sensory transducer  33.19 
 
 
539 aa  86.3  8e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2241  histidine kinase, HAMP region: chemotaxis sensory transducer  38.62 
 
 
598 aa  86.3  8e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.130389  normal  0.394001 
 
 
-
 
NC_009901  Spea_2471  methyl-accepting chemotaxis sensory transducer  30.56 
 
 
499 aa  86.3  9e-16  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  64.62 
 
 
523 aa  85.9  0.000000000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009486  Tpet_0009  methyl-accepting chemotaxis sensory transducer  38.59 
 
 
661 aa  85.9  0.000000000000001  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  41.5 
 
 
713 aa  85.9  0.000000000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  40.52 
 
 
633 aa  85.5  0.000000000000001  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  40.62 
 
 
620 aa  85.9  0.000000000000001  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_008228  Patl_0068  methyl-accepting chemotaxis sensory transducer  38.55 
 
 
648 aa  85.5  0.000000000000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1155  methyl-accepting chemotaxis sensory transducer  33.05 
 
 
523 aa  85.5  0.000000000000001  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4122  methyl-accepting chemotaxis sensory transducer  42.52 
 
 
676 aa  85.9  0.000000000000001  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  62.16 
 
 
639 aa  85.9  0.000000000000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0921  methyl-accepting chemotaxis sensory transducer  53.93 
 
 
483 aa  85.5  0.000000000000001  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1114  methyl-accepting chemotaxis sensory transducer  38.51 
 
 
700 aa  85.9  0.000000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.655641 
 
 
-
 
CP001637  EcDH1_1754  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
553 aa  85.1  0.000000000000002  Escherichia coli DH1  Bacteria  normal  0.0705276  n/a   
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  43.85 
 
 
636 aa  85.1  0.000000000000002  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
NC_010676  Bphyt_4117  methyl-accepting chemotaxis sensory transducer  61.64 
 
 
545 aa  84.7  0.000000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  0.36552  normal 
 
 
-
 
NC_010506  Swoo_4441  methyl-accepting chemotaxis sensory transducer  38.67 
 
 
654 aa  85.1  0.000000000000002  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_1746  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
553 aa  85.1  0.000000000000002  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_4624  methyl-accepting chemotaxis protein  32.74 
 
 
539 aa  84.7  0.000000000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.140064  n/a   
 
 
-
 
NC_009800  EcHS_A1982  methyl-accepting chemotaxis protein II  44.44 
 
 
553 aa  85.1  0.000000000000002  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3002  methyl-accepting chemotaxis sensory transducer  37.36 
 
 
705 aa  84.7  0.000000000000002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.568622  n/a   
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  35.71 
 
 
558 aa  85.5  0.000000000000002  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
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