Gene Shewana3_2222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2222 
Symbol 
ID4478618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2669269 
End bp2670405 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content46% 
IMG OID639726817 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_869857 
Protein GI117920665 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.894674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATACA AGGATGGCAT TGTTGCAGTG TTTGCAGCAG TAATAGGATA TTTTATCGGC 
AGCTTAGTCA GTTTTACGCT GAGTACCTTA GTTGCCGTGA TTATCATGCT CGGTTGGCAA
TTCTATCGAC AATCCTCAGC CTCTCAACCC ATACCTCACT CCTTTGCCAC TTCCGCAGCG
AGCGGCGACT GGCAAGATCA GCTTAATCTC TATCAAGAAG TGTCAGTGTC ATTAAAGACC
TGCGAGCAGA GTATCGACGA TGTGCTGTCG GTACAGTCGG ATGCGGTTGA TTTACTCGGT
GGCGCCTTCG ATGGCTTAGG TAAATTAATG CACGAGCAAA GCGAGTTTAT CTCAGCATTG
GTTCATAGCG CCGATGATGA AGAAATCTTT CACTCAGAGC AGATGAAGCT ATTTGCCAAT
AACACTTCGA TGACGCTAGA GCGTTTTATT CAATCGACCA TTGAGATGTC TGCATCCAAT
ATCGATCTGC TCGAAAAGGT CAATGTGATT TATGAATCTA TGCCTCAGGC GATGAAGGCA
CTCAAGGATA TAGACCAAAT CTCTTCGCAA ACTAATCTAT TAGCCTTAAA TGCGGCCATT
GAAGCCGCCC GCGCGGGCGA TGCGGGCAGG GGCTTTGCCG TGGTGGCCGA TGAAGTGCGC
GCCTTATCTA ATCGCAGTGC AGGCTTTAGC GAAAGTATTC AAAAACAGTT ACATACCATT
CAAGTGCAAA TCGAGCAGCT CACCCATCAA GTGAGTAAAG TGGCTGCTCA GGATATGTCT
TACATTATTG AGGCGAAAAA AGATCTCGAT ACCGCGCTGG AGCAAATCAT TGTTAAAGCA
GAAAAAGATG CCGCAGTGAT TGACAGAATT GATGCCTCTG CCCATGAATT GGAAAGCGCC
ATTGCAGACG CTATTCGTGG CTTACAATTT AGCGATATCA CCTCCCAAAG TATGATTTAC
ACCAATCAGA CGCTGCAACA TTTGCGGGAG TCCTTAAATA GTGTCACCGC GATGTCGCCT
GAAGAATTCG ACGAACAGTG TGATGGTCTG GTATCCCAGA TCAGTGGTCG GCGTAAAAAT
ACCCATAACC CAGTATCAGC AAGTCAAATC AGTTGCGGTG AAATTGAGCT TTTCTAA
 
Protein sequence
MTYKDGIVAV FAAVIGYFIG SLVSFTLSTL VAVIIMLGWQ FYRQSSASQP IPHSFATSAA 
SGDWQDQLNL YQEVSVSLKT CEQSIDDVLS VQSDAVDLLG GAFDGLGKLM HEQSEFISAL
VHSADDEEIF HSEQMKLFAN NTSMTLERFI QSTIEMSASN IDLLEKVNVI YESMPQAMKA
LKDIDQISSQ TNLLALNAAI EAARAGDAGR GFAVVADEVR ALSNRSAGFS ESIQKQLHTI
QVQIEQLTHQ VSKVAAQDMS YIIEAKKDLD TALEQIIVKA EKDAAVIDRI DASAHELESA
IADAIRGLQF SDITSQSMIY TNQTLQHLRE SLNSVTAMSP EEFDEQCDGL VSQISGRRKN
THNPVSASQI SCGEIELF