More than 300 homologs were found in PanDaTox collection
for query gene Shewana3_2222 on replicon NC_008577
Organism: Shewanella sp. ANA-3



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008321  Shewmr4_2097  methyl-accepting chemotaxis sensory transducer  92.06 
 
 
378 aa  711    Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1877  methyl-accepting chemotaxis sensory transducer  91.8 
 
 
378 aa  711    Shewanella sp. MR-7  Bacteria  normal  0.410986  normal  0.95878 
 
 
-
 
NC_008577  Shewana3_2222  methyl-accepting chemotaxis sensory transducer  100 
 
 
378 aa  770    Shewanella sp. ANA-3  Bacteria  normal  0.894674  normal 
 
 
-
 
NC_011663  Sbal223_2094  methyl-accepting chemotaxis sensory transducer  69.21 
 
 
380 aa  532  1e-150  Shewanella baltica OS223  Bacteria  normal  0.465964  normal 
 
 
-
 
NC_009665  Shew185_2251  methyl-accepting chemotaxis sensory transducer  69.21 
 
 
380 aa  532  1e-150  Shewanella baltica OS185  Bacteria  normal  0.0952292  n/a   
 
 
-
 
NC_009997  Sbal195_2368  methyl-accepting chemotaxis sensory transducer  69.21 
 
 
380 aa  533  1e-150  Shewanella baltica OS195  Bacteria  normal  0.0668336  normal  0.991447 
 
 
-
 
NC_009052  Sbal_2106  methyl-accepting chemotaxis sensory transducer  67.63 
 
 
380 aa  518  1e-146  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2117  methyl-accepting chemotaxis protein  67.29 
 
 
377 aa  500  1e-140  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_3295  methyl-accepting chemotaxis sensory transducer  49.17 
 
 
384 aa  276  4e-73  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_00410  methyl-accepting chemotaxis protein  40.38 
 
 
394 aa  247  2e-64  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0724  chemotaxis sensory transducer  33 
 
 
405 aa  156  6e-37  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.435605 
 
 
-
 
NC_008463  PA14_02270  putative chemotaxis transducer  31.48 
 
 
390 aa  150  5e-35  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.319109  normal 
 
 
-
 
NC_009656  PSPA7_0260  putative chemotaxis transducer  30.77 
 
 
391 aa  148  2.0000000000000003e-34  Pseudomonas aeruginosa PA7  Bacteria  normal  0.237341  n/a   
 
 
-
 
NC_011071  Smal_1917  methyl-accepting chemotaxis sensory transducer  29.69 
 
 
396 aa  144  3e-33  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.386674 
 
 
-
 
NC_010717  PXO_01024  chemotaxis protein  30.59 
 
 
366 aa  139  6e-32  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0730182  n/a   
 
 
-
 
NC_010717  PXO_06142  chemotaxis protein  30.59 
 
 
366 aa  139  6e-32  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0352354  n/a   
 
 
-
 
NC_008789  Hhal_2159  methyl-accepting chemotaxis sensory transducer  28.63 
 
 
414 aa  131  2.0000000000000002e-29  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0155  methyl-accepting chemotaxis protein  29.79 
 
 
384 aa  116  6e-25  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0759  methyl-accepting chemotaxis sensory transducer  31.25 
 
 
406 aa  111  2.0000000000000002e-23  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3578  methyl-accepting chemotaxis sensory transducer  28.96 
 
 
331 aa  98.2  2e-19  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_1365  methyl-accepting chemotaxis sensory transducer  39.76 
 
 
566 aa  96.7  6e-19  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3125  chemotaxis sensory transducer  26.52 
 
 
407 aa  95.9  9e-19  Dechloromonas aromatica RCB  Bacteria  normal  0.443773  normal 
 
 
-
 
NC_010483  TRQ2_1321  methyl-accepting chemotaxis sensory transducer  39.76 
 
 
566 aa  95.1  2e-18  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00082247  n/a   
 
 
-
 
NC_009831  Ssed_1987  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  42.28 
 
 
518 aa  94.7  2e-18  Shewanella sediminis HAW-EB3  Bacteria  normal  0.185607  normal  0.0170041 
 
 
-
 
NC_007643  Rru_A1197  chemotaxis sensory transducer  42.15 
 
 
688 aa  92  1e-17  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2149  hypothetical protein  26.54 
 
 
374 aa  92  1e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.393338  normal 
 
 
-
 
NC_012850  Rleg_0327  methyl-accepting chemotaxis sensory transducer  37.65 
 
 
544 aa  92  1e-17  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.141004  normal 
 
 
-
 
NC_013457  VEA_000502  methyl-accepting chemotaxis protein  34.65 
 
 
589 aa  89  1e-16  Vibrio sp. Ex25  Bacteria  normal  0.567249  n/a   
 
 
-
 
NC_013223  Dret_0342  methyl-accepting chemotaxis sensory transducer  39.26 
 
 
699 aa  88.2  2e-16  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05387  histidine kinase  35.56 
 
 
589 aa  88.2  2e-16  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007912  Sde_3111  putative methyl-accepting chemotaxis sensory transducer  36.69 
 
 
397 aa  88.6  2e-16  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3023  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.34 
 
 
514 aa  88.2  2e-16  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0659  methyl-accepting chemotaxis sensory transducer  34.08 
 
 
798 aa  88.2  2e-16  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  41.71 
 
 
623 aa  88.6  2e-16  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_011369  Rleg2_0295  methyl-accepting chemotaxis sensory transducer  36.42 
 
 
542 aa  87.8  3e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.579755 
 
 
-
 
NC_009456  VC0395_0207  methyl-accepting chemotaxis protein  38.99 
 
 
666 aa  87  4e-16  Vibrio cholerae O395  Bacteria  normal  0.152775  n/a   
 
 
-
 
NC_007954  Sden_1601  chemotaxis sensory transducer  41.86 
 
 
500 aa  87  4e-16  Shewanella denitrificans OS217  Bacteria  normal  0.78336  n/a   
 
 
-
 
NC_008321  Shewmr4_1807  methyl-accepting chemotaxis sensory transducer  40.31 
 
 
505 aa  87.4  4e-16  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2170  methyl-accepting chemotaxis sensory transducer  40.31 
 
 
505 aa  87.4  4e-16  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1862  methyl-accepting chemotaxis sensory transducer  40.31 
 
 
505 aa  87.4  4e-16  Shewanella sp. ANA-3  Bacteria  normal  0.149959  normal 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  31.25 
 
 
549 aa  87  5e-16  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3745  methyl-accepting chemotaxis sensory transducer  34.85 
 
 
852 aa  87  5e-16  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1041  methyl-accepting chemotaxis protein  37.58 
 
 
541 aa  86.7  6e-16  Geobacter sulfurreducens PCA  Bacteria  normal  0.893443  n/a   
 
 
-
 
NC_009438  Sputcn32_1827  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
502 aa  86.7  6e-16  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00626539  n/a   
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.68 
 
 
626 aa  86.7  6e-16  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_007519  Dde_3261  methyl-accepting chemotaxis sensory transducer  39.26 
 
 
613 aa  86.7  6e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0552  putative methyl-accepting chemotaxis sensory transducer  46.03 
 
 
648 aa  86.7  6e-16  Shewanella amazonensis SB2B  Bacteria  normal  0.283806  decreased coverage  0.00439756 
 
 
-
 
NC_002939  GSU0756  methyl-accepting chemotaxis protein  36.71 
 
 
549 aa  86.7  7e-16  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3465  methyl-accepting chemotaxis sensory transducer  40.71 
 
 
423 aa  86.7  7e-16  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_2782  methyl-accepting chemotaxis sensory transducer  35.98 
 
 
601 aa  86.3  8e-16  Rhodothermus marinus DSM 4252  Bacteria  normal  0.163256  n/a   
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  31.4 
 
 
522 aa  86.3  9e-16  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0394  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
530 aa  86.3  9e-16  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0942  methyl-accepting chemotaxis sensory transducer  40.51 
 
 
676 aa  85.5  0.000000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  30.21 
 
 
630 aa  85.9  0.000000000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3322  methyl-accepting chemotaxis sensory transducer  40.12 
 
 
539 aa  85.5  0.000000000000001  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.910778 
 
 
-
 
NC_011146  Gbem_3876  methyl-accepting chemotaxis sensory transducer  32.71 
 
 
535 aa  85.1  0.000000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  0.74566  n/a   
 
 
-
 
NC_009483  Gura_0476  methyl-accepting chemotaxis sensory transducer  38.51 
 
 
830 aa  85.1  0.000000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  40.3 
 
 
570 aa  85.1  0.000000000000002  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  35.54 
 
 
567 aa  85.1  0.000000000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2471  methyl-accepting chemotaxis sensory transducer  41.96 
 
 
499 aa  85.1  0.000000000000002  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  31.01 
 
 
533 aa  85.1  0.000000000000002  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3323  methyl-accepting chemotaxis sensory transducer  40.12 
 
 
539 aa  85.5  0.000000000000002  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  31.01 
 
 
522 aa  85.1  0.000000000000002  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3063  methyl-accepting chemotaxis sensory transducer  37.34 
 
 
533 aa  85.1  0.000000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  0.378908  n/a   
 
 
-
 
NC_011663  Sbal223_1280  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.35 
 
 
522 aa  84.3  0.000000000000003  Shewanella baltica OS223  Bacteria  normal  normal  0.160306 
 
 
-
 
NC_011899  Hore_20840  methyl-accepting chemotaxis sensory transducer  30.05 
 
 
673 aa  84.3  0.000000000000003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0814  methyl-accepting chemotaxis sensory transducer  44.86 
 
 
685 aa  84.3  0.000000000000003  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1505  methyl-accepting chemotaxis sensory transducer  33.82 
 
 
791 aa  84.3  0.000000000000003  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0144234 
 
 
-
 
NC_008789  Hhal_1714  methyl-accepting chemotaxis sensory transducer  36.46 
 
 
673 aa  84.7  0.000000000000003  Halorhodospira halophila SL1  Bacteria  normal  0.712235  n/a   
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  34.72 
 
 
662 aa  84.3  0.000000000000003  Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_008345  Sfri_3219  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.78 
 
 
516 aa  84.3  0.000000000000003  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.1353  n/a   
 
 
-
 
NC_012918  GM21_3964  methyl-accepting chemotaxis sensory transducer  32.99 
 
 
535 aa  84  0.000000000000004  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000408371 
 
 
-
 
NC_004578  PSPTO_2526  methyl-accepting chemotaxis protein  31.54 
 
 
559 aa  84  0.000000000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.591236  n/a   
 
 
-
 
NC_004578  PSPTO_2997  methyl-accepting chemotaxis protein  41.29 
 
 
542 aa  84  0.000000000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.686035  n/a   
 
 
-
 
NC_007005  Psyr_0789  chemotaxis sensory transducer  33.5 
 
 
405 aa  84  0.000000000000004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0496  methyl-accepting chemotaxis sensory transducer  32.61 
 
 
530 aa  84  0.000000000000004  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1196  methyl-accepting chemotaxis sensory transducer  31.75 
 
 
522 aa  84  0.000000000000004  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  35.08 
 
 
638 aa  84  0.000000000000004  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_009831  Ssed_1498  methyl-accepting chemotaxis sensory transducer  32.57 
 
 
687 aa  84  0.000000000000004  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000111484  normal 
 
 
-
 
NC_002939  GSU0935  methyl-accepting chemotaxis protein, putative  32.14 
 
 
528 aa  83.6  0.000000000000005  Geobacter sulfurreducens PCA  Bacteria  normal  0.220244  n/a   
 
 
-
 
NC_009997  Sbal195_1324  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
522 aa  83.6  0.000000000000005  Shewanella baltica OS195  Bacteria  normal  normal  0.0159359 
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  34.73 
 
 
520 aa  83.6  0.000000000000005  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_2083  methyl-accepting chemotaxis protein  39.53 
 
 
505 aa  84  0.000000000000005  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_002906  methyl-accepting chemotaxis protein  38.04 
 
 
678 aa  83.6  0.000000000000005  Vibrio sp. Ex25  Bacteria  normal  0.816112  n/a   
 
 
-
 
NC_007519  Dde_3561  methyl-accepting chemotaxis sensory transducer  38.18 
 
 
673 aa  83.6  0.000000000000005  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.506738  n/a   
 
 
-
 
NC_009052  Sbal_1246  methyl-accepting chemotaxis sensory transducer  33.71 
 
 
522 aa  83.6  0.000000000000005  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1438  methyl-accepting chemotaxis sensory transducer  37.35 
 
 
540 aa  83.6  0.000000000000005  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008607  Ppro_3805  methyl-accepting chemotaxis sensory transducer  43.08 
 
 
422 aa  83.6  0.000000000000005  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000721713  n/a   
 
 
-
 
NC_008751  Dvul_2947  methyl-accepting chemotaxis sensory transducer  44 
 
 
749 aa  83.6  0.000000000000006  Desulfovibrio vulgaris DP4  Bacteria  normal  0.732257  normal 
 
 
-
 
NC_011663  Sbal223_3064  methyl-accepting chemotaxis sensory transducer  33.71 
 
 
522 aa  83.2  0.000000000000006  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000000699577 
 
 
-
 
NC_011769  DvMF_2482  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.86 
 
 
673 aa  83.2  0.000000000000006  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  29.87 
 
 
629 aa  83.2  0.000000000000006  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_009665  Shew185_1290  methyl-accepting chemotaxis sensory transducer  33.71 
 
 
522 aa  83.2  0.000000000000006  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1009  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.19 
 
 
569 aa  83.6  0.000000000000006  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.103849  normal  0.0253995 
 
 
-
 
NC_011883  Ddes_1895  methyl-accepting chemotaxis sensory transducer  59.68 
 
 
559 aa  83.2  0.000000000000006  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.191486  n/a   
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  37.82 
 
 
622 aa  83.2  0.000000000000006  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2678  methyl-accepting chemotaxis protein  35.58 
 
 
533 aa  83.6  0.000000000000006  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.221197  n/a   
 
 
-
 
NC_009656  PSPA7_2443  putative chemotaxis transducer  40.58 
 
 
531 aa  83.6  0.000000000000006  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3261  chemotaxis sensory transducer  42.74 
 
 
534 aa  83.2  0.000000000000007  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1836  methyl-accepting chemotaxis sensory transducer  52.27 
 
 
359 aa  83.2  0.000000000000007  Marinomonas sp. MWYL1  Bacteria  normal  0.126283  normal  0.522282 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>