More than 300 homologs were found in PanDaTox collection
for query gene BBta_2149 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_2149  hypothetical protein  100 
 
 
374 aa  754    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.393338  normal 
 
 
-
 
NC_010505  Mrad2831_4814  methyl-accepting chemotaxis sensory transducer  30.7 
 
 
427 aa  150  5e-35  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  decreased coverage  0.00125968 
 
 
-
 
NC_008577  Shewana3_2222  methyl-accepting chemotaxis sensory transducer  26.54 
 
 
378 aa  92  1e-17  Shewanella sp. ANA-3  Bacteria  normal  0.894674  normal 
 
 
-
 
NC_007298  Daro_0724  chemotaxis sensory transducer  32.09 
 
 
405 aa  87.8  3e-16  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.435605 
 
 
-
 
NC_008322  Shewmr7_1877  methyl-accepting chemotaxis sensory transducer  32.73 
 
 
378 aa  84  0.000000000000004  Shewanella sp. MR-7  Bacteria  normal  0.410986  normal  0.95878 
 
 
-
 
NC_011071  Smal_1917  methyl-accepting chemotaxis sensory transducer  26.89 
 
 
396 aa  83.6  0.000000000000005  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.386674 
 
 
-
 
NC_008321  Shewmr4_2097  methyl-accepting chemotaxis sensory transducer  32.73 
 
 
378 aa  83.2  0.000000000000006  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0155  methyl-accepting chemotaxis protein  25.63 
 
 
384 aa  82.4  0.00000000000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2106  methyl-accepting chemotaxis sensory transducer  26.67 
 
 
380 aa  81.3  0.00000000000003  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_2159  methyl-accepting chemotaxis sensory transducer  26.51 
 
 
414 aa  80.9  0.00000000000003  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2117  methyl-accepting chemotaxis protein  28.65 
 
 
377 aa  80.9  0.00000000000004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_1571  methyl-accepting chemotaxis sensory transducer  32.42 
 
 
362 aa  80.1  0.00000000000006  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_2368  methyl-accepting chemotaxis sensory transducer  25.26 
 
 
380 aa  79.7  0.00000000000008  Shewanella baltica OS195  Bacteria  normal  0.0668336  normal  0.991447 
 
 
-
 
NC_011663  Sbal223_2094  methyl-accepting chemotaxis sensory transducer  25.26 
 
 
380 aa  79.3  0.00000000000009  Shewanella baltica OS223  Bacteria  normal  0.465964  normal 
 
 
-
 
NC_009665  Shew185_2251  methyl-accepting chemotaxis sensory transducer  25.26 
 
 
380 aa  79.3  0.00000000000009  Shewanella baltica OS185  Bacteria  normal  0.0952292  n/a   
 
 
-
 
NC_008463  PA14_02270  putative chemotaxis transducer  26.74 
 
 
390 aa  79.3  0.00000000000009  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.319109  normal 
 
 
-
 
NC_009656  PSPA7_0260  putative chemotaxis transducer  26.97 
 
 
391 aa  79  0.0000000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  0.237341  n/a   
 
 
-
 
NC_009654  Mmwyl1_3295  methyl-accepting chemotaxis sensory transducer  24.87 
 
 
384 aa  76.6  0.0000000000007  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1140  chemotaxis sensory transducer  35.54 
 
 
418 aa  75.5  0.000000000001  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_01024  chemotaxis protein  25.44 
 
 
366 aa  75.1  0.000000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0730182  n/a   
 
 
-
 
NC_010717  PXO_06142  chemotaxis protein  25.44 
 
 
366 aa  75.1  0.000000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0352354  n/a   
 
 
-
 
NC_009438  Sputcn32_1827  methyl-accepting chemotaxis sensory transducer  41.35 
 
 
502 aa  73.2  0.000000000006  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00626539  n/a   
 
 
-
 
NC_011138  MADE_00410  methyl-accepting chemotaxis protein  25 
 
 
394 aa  70.9  0.00000000003  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3578  methyl-accepting chemotaxis sensory transducer  30.43 
 
 
331 aa  70.9  0.00000000004  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2319  methyl-accepting chemotaxis sensory transducer  29.72 
 
 
546 aa  70.5  0.00000000005  Pseudomonas putida W619  Bacteria  normal  0.217936  normal 
 
 
-
 
NC_009052  Sbal_1872  methyl-accepting chemotaxis sensory transducer  39.42 
 
 
506 aa  69.3  0.0000000001  Shewanella baltica OS155  Bacteria  normal  0.0204582  n/a   
 
 
-
 
NC_011663  Sbal223_2420  methyl-accepting chemotaxis sensory transducer  38.32 
 
 
506 aa  69.3  0.0000000001  Shewanella baltica OS223  Bacteria  normal  0.0671416  hitchhiker  0.00255163 
 
 
-
 
NC_009997  Sbal195_1906  methyl-accepting chemotaxis sensory transducer  38.32 
 
 
506 aa  69.3  0.0000000001  Shewanella baltica OS195  Bacteria  hitchhiker  0.00117287  normal 
 
 
-
 
NC_009665  Shew185_1899  methyl-accepting chemotaxis sensory transducer  38.32 
 
 
506 aa  69.3  0.0000000001  Shewanella baltica OS185  Bacteria  hitchhiker  0.000132488  n/a   
 
 
-
 
NC_011663  Sbal223_1632  methyl-accepting chemotaxis sensory transducer  30.22 
 
 
484 aa  68.9  0.0000000001  Shewanella baltica OS223  Bacteria  normal  0.19262  hitchhiker  0.00019204 
 
 
-
 
NC_009438  Sputcn32_1103  methyl-accepting chemotaxis sensory transducer  31.87 
 
 
706 aa  68.6  0.0000000002  Shewanella putrefaciens CN-32  Bacteria  normal  0.540965  n/a   
 
 
-
 
NC_008321  Shewmr4_2909  methyl-accepting chemotaxis sensory transducer  31.87 
 
 
706 aa  68.6  0.0000000002  Shewanella sp. MR-4  Bacteria  normal  normal  0.307732 
 
 
-
 
NC_008322  Shewmr7_2991  methyl-accepting chemotaxis sensory transducer  31.87 
 
 
706 aa  68.6  0.0000000002  Shewanella sp. MR-7  Bacteria  normal  0.0750474  normal 
 
 
-
 
NC_008789  Hhal_0535  methyl-accepting chemotaxis sensory transducer  30.82 
 
 
487 aa  67.8  0.0000000003  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0759  methyl-accepting chemotaxis sensory transducer  25.1 
 
 
406 aa  67.8  0.0000000003  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_013158  Huta_2355  methyl-accepting chemotaxis sensory transducer  25.91 
 
 
441 aa  67.8  0.0000000003  Halorhabdus utahensis DSM 12940  Archaea  normal  0.143256  n/a   
 
 
-
 
NC_009831  Ssed_2599  methyl-accepting chemotaxis sensory transducer  38.83 
 
 
501 aa  67.8  0.0000000003  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000558383  normal 
 
 
-
 
NC_013922  Nmag_1386  methyl-accepting chemotaxis sensory transducer  28.9 
 
 
867 aa  67.4  0.0000000004  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_012039  Cla_0105  MCP-domain signal transduction protein  35.96 
 
 
381 aa  67.4  0.0000000004  Campylobacter lari RM2100  Bacteria  hitchhiker  0.0000000000762426  n/a   
 
 
-
 
NC_009901  Spea_2471  methyl-accepting chemotaxis sensory transducer  42.05 
 
 
499 aa  67.4  0.0000000004  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3088  methyl-accepting chemotaxis sensory transducer  30.9 
 
 
706 aa  67.4  0.0000000004  Shewanella sp. ANA-3  Bacteria  normal  0.0193815  hitchhiker  0.00820004 
 
 
-
 
NC_008576  Mmc1_0310  methyl-accepting chemotaxis sensory transducer  28.16 
 
 
994 aa  67  0.0000000005  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1807  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
505 aa  66.6  0.0000000006  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2170  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
505 aa  66.6  0.0000000006  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1862  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
505 aa  67  0.0000000006  Shewanella sp. ANA-3  Bacteria  normal  0.149959  normal 
 
 
-
 
NC_009438  Sputcn32_2422  methyl-accepting chemotaxis sensory transducer  35.96 
 
 
484 aa  66.6  0.0000000007  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1630  chemotaxis sensory transducer  28.02 
 
 
541 aa  66.6  0.0000000007  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0250136 
 
 
-
 
NC_004347  SO_2083  methyl-accepting chemotaxis protein  37.5 
 
 
505 aa  66.2  0.0000000008  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007954  Sden_0911  chemotaxis sensory transducer  30.29 
 
 
705 aa  66.2  0.0000000008  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000403524  n/a   
 
 
-
 
NC_007954  Sden_1601  chemotaxis sensory transducer  42.55 
 
 
500 aa  66.2  0.0000000008  Shewanella denitrificans OS217  Bacteria  normal  0.78336  n/a   
 
 
-
 
NC_010483  TRQ2_1321  methyl-accepting chemotaxis sensory transducer  27.86 
 
 
566 aa  65.9  0.000000001  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00082247  n/a   
 
 
-
 
NC_009665  Shew185_2744  methyl-accepting chemotaxis sensory transducer  35.96 
 
 
484 aa  65.9  0.000000001  Shewanella baltica OS185  Bacteria  normal  0.234847  n/a   
 
 
-
 
NC_004347  SO_1278  methyl-accepting chemotaxis protein  29.78 
 
 
706 aa  65.9  0.000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_1187  methyl-accepting chemotaxis sensory transducer  30.77 
 
 
706 aa  65.9  0.000000001  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0350  toxin co-regulated pilus biosynthesis protein I  28.29 
 
 
620 aa  65.9  0.000000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2727  methyl-accepting chemotaxis sensory transducer  35.96 
 
 
484 aa  65.5  0.000000001  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000872044  n/a   
 
 
-
 
NC_009997  Sbal195_1220  methyl-accepting chemotaxis sensory transducer  30.77 
 
 
706 aa  65.9  0.000000001  Shewanella baltica OS195  Bacteria  normal  normal  0.46231 
 
 
-
 
NC_009486  Tpet_1365  methyl-accepting chemotaxis sensory transducer  28.18 
 
 
566 aa  65.9  0.000000001  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2820  methyl-accepting chemotaxis sensory transducer  35.96 
 
 
484 aa  65.5  0.000000001  Shewanella baltica OS195  Bacteria  normal  0.0806929  normal  0.41842 
 
 
-
 
NC_013202  Hmuk_1635  methyl-accepting chemotaxis sensory transducer  30.85 
 
 
529 aa  65.9  0.000000001  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_012560  Avin_24370  methyl accepting chemotaxis sensory transducer  25.67 
 
 
575 aa  65.9  0.000000001  Azotobacter vinelandii DJ  Bacteria  normal  0.0252866  n/a   
 
 
-
 
NC_009831  Ssed_1664  methyl-accepting chemotaxis sensory transducer  36.61 
 
 
482 aa  65.5  0.000000001  Shewanella sediminis HAW-EB3  Bacteria  normal  0.587548  normal 
 
 
-
 
NC_013093  Amir_0198  methyl-accepting chemotaxis sensory transducer  27.12 
 
 
715 aa  65.9  0.000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.419669  n/a   
 
 
-
 
NC_003910  CPS_4927  methyl-accepting chemotaxis protein/sensory box protein  46.43 
 
 
511 aa  65.1  0.000000002  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3709  methyl-accepting chemotaxis sensory transducer  30.69 
 
 
707 aa  65.1  0.000000002  Marinomonas sp. MWYL1  Bacteria  normal  0.852924  normal  0.967698 
 
 
-
 
NC_004578  PSPTO_3580  methyl-accepting chemotaxis protein  29.41 
 
 
546 aa  65.5  0.000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_3036  methyl-accepting chemotaxis sensory transducer  28.8 
 
 
570 aa  64.7  0.000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3170  methyl-accepting chemotaxis sensory transducer  30.18 
 
 
706 aa  64.7  0.000000002  Shewanella baltica OS223  Bacteria  normal  normal  0.942476 
 
 
-
 
NC_007519  Dde_3561  methyl-accepting chemotaxis sensory transducer  37.72 
 
 
673 aa  65.1  0.000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.506738  n/a   
 
 
-
 
NC_013512  Sdel_1073  chemotaxis sensory transducer  37.74 
 
 
633 aa  65.1  0.000000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00919731  n/a   
 
 
-
 
NC_007643  Rru_A2333  chemotaxis sensory transducer  25.69 
 
 
461 aa  64.7  0.000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3665  chemotaxis sensory transducer  31.09 
 
 
567 aa  64.7  0.000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3674  methyl-accepting chemotaxis sensory transducer  33.75 
 
 
700 aa  64.7  0.000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.130272  normal 
 
 
-
 
NC_010506  Swoo_2814  methyl-accepting chemotaxis sensory transducer  27.88 
 
 
702 aa  65.1  0.000000002  Shewanella woodyi ATCC 51908  Bacteria  normal  0.650804  normal 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  36.81 
 
 
633 aa  64.7  0.000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_013512  Sdel_0262  chemotaxis sensory transducer  37.37 
 
 
650 aa  64.7  0.000000003  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1442  methyl-accepting chemotaxis sensory transducer  36.04 
 
 
484 aa  64.3  0.000000003  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2111  methyl-accepting chemotaxis sensory transducer  30.99 
 
 
572 aa  64.7  0.000000003  Marinobacter aquaeolei VT8  Bacteria  normal  0.138456  n/a   
 
 
-
 
NC_008322  Shewmr7_1507  methyl-accepting chemotaxis sensory transducer  36.04 
 
 
484 aa  64.3  0.000000003  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1554  methyl-accepting chemotaxis protein  30.72 
 
 
684 aa  64.7  0.000000003  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1152  methyl-accepting chemotaxis sensory transducer  34.13 
 
 
484 aa  64.7  0.000000003  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.26629  normal 
 
 
-
 
NC_008700  Sama_1954  putative methyl-accepting chemotaxis sensory transducer  42.05 
 
 
504 aa  64.7  0.000000003  Shewanella amazonensis SB2B  Bacteria  normal  0.0290306  normal 
 
 
-
 
NC_008577  Shewana3_1499  methyl-accepting chemotaxis sensory transducer  36.04 
 
 
484 aa  64.3  0.000000003  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  32.09 
 
 
634 aa  63.9  0.000000004  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0137  methyl-accepting chemotaxis sensory transducer  36.04 
 
 
748 aa  63.9  0.000000004  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3929  methyl-accepting chemotaxis protein  41.67 
 
 
505 aa  63.5  0.000000005  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003409  methyl-accepting chemotaxis protein  42.05 
 
 
467 aa  63.5  0.000000005  Vibrio sp. Ex25  Bacteria  decreased coverage  0.0000050033  n/a   
 
 
-
 
NC_009092  Shew_2301  methyl-accepting chemotaxis sensory transducer  30.27 
 
 
705 aa  63.9  0.000000005  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0228  methyl-accepting chemotaxis sensory transducer  36.04 
 
 
667 aa  63.5  0.000000005  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2883  chemotaxis sensory transducer  27.56 
 
 
537 aa  63.5  0.000000006  Dechloromonas aromatica RCB  Bacteria  hitchhiker  7.44547e-18  normal 
 
 
-
 
NC_013512  Sdel_1434  chemotaxis sensory transducer  33.61 
 
 
530 aa  63.5  0.000000006  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0358  methyl-accepting chemotaxis sensory transducer  27.4 
 
 
560 aa  63.5  0.000000006  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0237962  normal  0.734928 
 
 
-
 
NC_009783  VIBHAR_02368  hypothetical protein  35.54 
 
 
472 aa  63.5  0.000000006  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_002939  GSU1287  methyl accepting chemotaxis protein, putative  24.22 
 
 
627 aa  63.2  0.000000007  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4653  methyl-accepting chemotaxis sensory transducer  30.99 
 
 
639 aa  63.2  0.000000007  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_1607  methyl-accepting chemotaxis sensory transducer  36.04 
 
 
668 aa  63.2  0.000000007  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0509  methyl-accepting chemotaxis sensory transducer  36.04 
 
 
666 aa  63.2  0.000000007  Petrotoga mobilis SJ95  Bacteria  hitchhiker  0.0000844427  n/a   
 
 
-
 
NC_013216  Dtox_1954  methyl-accepting chemotaxis sensory transducer  34.31 
 
 
618 aa  63.2  0.000000007  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1741  methyl-accepting chemotaxis sensory transducer  26.2 
 
 
597 aa  63.2  0.000000007  Geobacter lovleyi SZ  Bacteria  normal  0.049484  n/a   
 
 
-
 
NC_009092  Shew_2263  methyl-accepting chemotaxis sensory transducer  34.86 
 
 
482 aa  63.2  0.000000007  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00569391  normal  0.100749 
 
 
-
 
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