Gene Dtox_1954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1954 
Symbol 
ID8428936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2075270 
End bp2077126 
Gene Length1857 bp 
Protein Length618 aa 
Translation table11 
GC content41% 
IMG OID645034284 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_003191415 
Protein GI258515193 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGAAAA GAAGAAAAGT AGACAAACGA AACAATTTGC CAGGAGAGGC AAAAAAAAAT 
AAGTGGGGCA AAATGAAATT TTTAAATTGG TCATTAAAGG ATATGAAGTT TTTAAAATCG
GCGGTACGGT TAGCGGACAT ACAAAATAAA TTGACGGTTT TAAGGTGTTT ATTTGGCAAA
AAAAGTCATA AAAACTGTGC TCCCGCAAAG GTTATTGCAA AAAAATTCGA TAATAAGCCT
CTTAATTACA AGGGAGTAAC TTTTATTGAT AAGGTTAGCT TTCAGTTGCG TATATTGCTT
CTAATGACGA TGCTAGTTAT TTTTGTTATG AGTATATTGG GCATGGTCGC ATATTGGGAA
GGAAAACAAT GGCTGCAAAA ATATACTGAT GGCCGTTTAA CCTCATCAGC CAGTAATATT
TCGGAGAAAA TAGACCTTTT TACTACAACC GTTGATAGTC GTGAATTGGA GCGTAAATCC
GGATATCTTT TGAATTCTGA GGCCACCGGC TTTATGCGGC AGGGGCTGAA TGCATGCTTG
ATGATTATTG ATCAGCAGGG AAATGAGGTA TTGTCTTCCG GAAGAAATCA ACAGCGTATA
ACTTTTACTT CTGATTTAGA AGGTAAAATG TTTTCCAGCC GTACCGGTTT ATTTACGATA
GAGGTACAAA AAGAATTGTG GCGGGTGGCC TATCAACAAA TTCCCGGAAA GAATTGGGTT
TGCGTAATTG GAGTACCGGT AGAACAGTAT TTATTGCCCG TAAAGCAATT AGGATTGTTA
ATCATTTTCG GTGGTCTGAT TACAGTGCTG GCAACAATAT TAATTTGCGC TCTGGGTGCC
CGGAAGTTTG CCGGTCCGCT AAATGAATTA ATCGATATTA TGTCTTTAGC CGGGGAAGGA
AATTTGACTT TACGGGCTAG GGAGACAAAA GTTGGCAAGG AATTATCTCT TTTAGGCAGT
GGCTTTAACC GTATGCTTTC CCATTTAGAA ATGTTAATCA AGGATTTTAG CCTTACTTCG
GGAGATTTGC ATCTTGCCAG TATGCAAATG CACCGGGTTG GAGAAAACCA GGTCCGGTTT
GCTTTATCTG CTGAACAAAG CGCTGAAAGA ATGGATTCAG TAGTTAAAAA TGTTAAAGGT
CTGGTGGTGG AAGCCGAAAC ATCTAGCCAG GAAATGATGC GGTTGGTGGA GGAAGGTTTG
CTGGGACTAA AAAATATAGT GGATAAAATT AAGGGTAATT GGCAGTTGTC TCAGGATAGT
TCTAAATCCA TGCAGTCCTT AACAGTACAT ATTCAGCAGA TTGGTAATAT AGTAGATATA
ATTAAGGACA TATCGCGTCA AACACATTTA TTATCCTTAA ATGCTTCAAT AGAAGCTGCC
CGGGCTGGGG AATATGGACG AGGTTTTTCC GTGGTTGCCG GAGAGGTGCG TAATCTGGCC
GAAGAAACCG GAAAGGCCAC AGGGGATGTA AGCCGTATTA TCAGTCTAAT CCAGGAAAGT
ACTGCCAGGG TTTTAGAGCA GGTGCAGTTA AGTGAGGATA TGGCCAATCA AGGCGTGACT
GCTGTGTCGA ATACTGAAGA CGCACTTGCC GGAATGCATC AGTCAGTTAT GCATACGGGA
AAGCTTGTGG ATTATATTGC CAATAATATT AGACAAATGG ATACTGAGGT AAATGAGACT
GTGTATTCAG TGCGTTTAAT AGCCGGTACA CAGGAAGTAA AAGGTGAGGT TGAAGGACAA
GTTTCTTCCC GTGAGGTGGC CCATTGGGCC GGACGGCTGG CCGAAATGGC TGTTCATGCG
CAAAATCAAT TAAAACGTTT TGACATCACC AATGAGAAAA TGAACCATAT AAAATGA
 
Protein sequence
MKKRRKVDKR NNLPGEAKKN KWGKMKFLNW SLKDMKFLKS AVRLADIQNK LTVLRCLFGK 
KSHKNCAPAK VIAKKFDNKP LNYKGVTFID KVSFQLRILL LMTMLVIFVM SILGMVAYWE
GKQWLQKYTD GRLTSSASNI SEKIDLFTTT VDSRELERKS GYLLNSEATG FMRQGLNACL
MIIDQQGNEV LSSGRNQQRI TFTSDLEGKM FSSRTGLFTI EVQKELWRVA YQQIPGKNWV
CVIGVPVEQY LLPVKQLGLL IIFGGLITVL ATILICALGA RKFAGPLNEL IDIMSLAGEG
NLTLRARETK VGKELSLLGS GFNRMLSHLE MLIKDFSLTS GDLHLASMQM HRVGENQVRF
ALSAEQSAER MDSVVKNVKG LVVEAETSSQ EMMRLVEEGL LGLKNIVDKI KGNWQLSQDS
SKSMQSLTVH IQQIGNIVDI IKDISRQTHL LSLNASIEAA RAGEYGRGFS VVAGEVRNLA
EETGKATGDV SRIISLIQES TARVLEQVQL SEDMANQGVT AVSNTEDALA GMHQSVMHTG
KLVDYIANNI RQMDTEVNET VYSVRLIAGT QEVKGEVEGQ VSSREVAHWA GRLAEMAVHA
QNQLKRFDIT NEKMNHIK