More than 300 homologs were found in PanDaTox collection
for query gene Shewmr4_2097 on replicon NC_008321
Organism: Shewanella sp. MR-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008321  Shewmr4_2097  methyl-accepting chemotaxis sensory transducer  100 
 
 
378 aa  772    Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1877  methyl-accepting chemotaxis sensory transducer  99.47 
 
 
378 aa  768    Shewanella sp. MR-7  Bacteria  normal  0.410986  normal  0.95878 
 
 
-
 
NC_008577  Shewana3_2222  methyl-accepting chemotaxis sensory transducer  92.06 
 
 
378 aa  711    Shewanella sp. ANA-3  Bacteria  normal  0.894674  normal 
 
 
-
 
NC_011663  Sbal223_2094  methyl-accepting chemotaxis sensory transducer  70.53 
 
 
380 aa  546  1e-154  Shewanella baltica OS223  Bacteria  normal  0.465964  normal 
 
 
-
 
NC_009665  Shew185_2251  methyl-accepting chemotaxis sensory transducer  70.53 
 
 
380 aa  546  1e-154  Shewanella baltica OS185  Bacteria  normal  0.0952292  n/a   
 
 
-
 
NC_009997  Sbal195_2368  methyl-accepting chemotaxis sensory transducer  70.53 
 
 
380 aa  546  1e-154  Shewanella baltica OS195  Bacteria  normal  0.0668336  normal  0.991447 
 
 
-
 
NC_009052  Sbal_2106  methyl-accepting chemotaxis sensory transducer  68.42 
 
 
380 aa  528  1e-149  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2117  methyl-accepting chemotaxis protein  68.68 
 
 
377 aa  514  1.0000000000000001e-145  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_3295  methyl-accepting chemotaxis sensory transducer  49.5 
 
 
384 aa  276  4e-73  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_00410  methyl-accepting chemotaxis protein  38.61 
 
 
394 aa  249  6e-65  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0724  chemotaxis sensory transducer  30 
 
 
405 aa  159  8e-38  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.435605 
 
 
-
 
NC_009656  PSPA7_0260  putative chemotaxis transducer  30.5 
 
 
391 aa  152  1e-35  Pseudomonas aeruginosa PA7  Bacteria  normal  0.237341  n/a   
 
 
-
 
NC_008463  PA14_02270  putative chemotaxis transducer  28.46 
 
 
390 aa  148  2.0000000000000003e-34  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.319109  normal 
 
 
-
 
NC_011071  Smal_1917  methyl-accepting chemotaxis sensory transducer  29.77 
 
 
396 aa  145  1e-33  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.386674 
 
 
-
 
NC_010717  PXO_01024  chemotaxis protein  30.12 
 
 
366 aa  135  8e-31  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0730182  n/a   
 
 
-
 
NC_010717  PXO_06142  chemotaxis protein  30.12 
 
 
366 aa  135  8e-31  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0352354  n/a   
 
 
-
 
NC_008789  Hhal_2159  methyl-accepting chemotaxis sensory transducer  26.88 
 
 
414 aa  134  3e-30  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0155  methyl-accepting chemotaxis protein  29.75 
 
 
384 aa  119  9.999999999999999e-26  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0759  methyl-accepting chemotaxis sensory transducer  29.8 
 
 
406 aa  99.4  8e-20  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3578  methyl-accepting chemotaxis sensory transducer  29.14 
 
 
331 aa  99  1e-19  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3125  chemotaxis sensory transducer  26.22 
 
 
407 aa  94.7  2e-18  Dechloromonas aromatica RCB  Bacteria  normal  0.443773  normal 
 
 
-
 
NC_009831  Ssed_1987  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  40.99 
 
 
518 aa  92.8  8e-18  Shewanella sediminis HAW-EB3  Bacteria  normal  0.185607  normal  0.0170041 
 
 
-
 
NC_009486  Tpet_1365  methyl-accepting chemotaxis sensory transducer  38.55 
 
 
566 aa  92.4  1e-17  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3023  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.76 
 
 
514 aa  92.8  1e-17  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1197  chemotaxis sensory transducer  42.15 
 
 
688 aa  91.7  2e-17  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0342  methyl-accepting chemotaxis sensory transducer  40.74 
 
 
699 aa  91.3  2e-17  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_1321  methyl-accepting chemotaxis sensory transducer  38.55 
 
 
566 aa  90.9  3e-17  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00082247  n/a   
 
 
-
 
NC_007912  Sde_3111  putative methyl-accepting chemotaxis sensory transducer  36.69 
 
 
397 aa  90.5  4e-17  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_3261  methyl-accepting chemotaxis sensory transducer  39.88 
 
 
613 aa  89.4  9e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0659  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
798 aa  89.4  9e-17  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  39.52 
 
 
623 aa  88.2  2e-16  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_012850  Rleg_0327  methyl-accepting chemotaxis sensory transducer  30.92 
 
 
544 aa  88.2  2e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.141004  normal 
 
 
-
 
NC_009456  VC0395_0250  methyl-accepting chemotaxis protein  26.87 
 
 
518 aa  88.6  2e-16  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3561  methyl-accepting chemotaxis sensory transducer  38.79 
 
 
673 aa  88.6  2e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.506738  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  32.98 
 
 
567 aa  88.2  2e-16  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0756  methyl-accepting chemotaxis protein  37.34 
 
 
549 aa  87.4  3e-16  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1601  chemotaxis sensory transducer  39.29 
 
 
500 aa  87.4  3e-16  Shewanella denitrificans OS217  Bacteria  normal  0.78336  n/a   
 
 
-
 
NC_008321  Shewmr4_1807  methyl-accepting chemotaxis sensory transducer  38.55 
 
 
505 aa  87.4  3e-16  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2170  methyl-accepting chemotaxis sensory transducer  38.55 
 
 
505 aa  87.4  3e-16  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1862  methyl-accepting chemotaxis sensory transducer  38.55 
 
 
505 aa  87.4  4e-16  Shewanella sp. ANA-3  Bacteria  normal  0.149959  normal 
 
 
-
 
NC_011146  Gbem_3876  methyl-accepting chemotaxis sensory transducer  32.71 
 
 
535 aa  87  5e-16  Geobacter bemidjiensis Bem  Bacteria  normal  0.74566  n/a   
 
 
-
 
NC_009456  VC0395_0207  methyl-accepting chemotaxis protein  46.43 
 
 
666 aa  87  5e-16  Vibrio cholerae O395  Bacteria  normal  0.152775  n/a   
 
 
-
 
NC_013223  Dret_1505  methyl-accepting chemotaxis sensory transducer  34.8 
 
 
791 aa  86.7  6e-16  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0144234 
 
 
-
 
NC_009438  Sputcn32_1827  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
502 aa  86.3  7e-16  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00626539  n/a   
 
 
-
 
NC_012912  Dd1591_0394  methyl-accepting chemotaxis sensory transducer  35.43 
 
 
530 aa  86.3  7e-16  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3044  methyl-accepting chemotaxis sensory transducer  33.15 
 
 
688 aa  86.3  9e-16  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  35.85 
 
 
549 aa  85.9  0.000000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3964  methyl-accepting chemotaxis sensory transducer  32.35 
 
 
535 aa  85.9  0.000000000000001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000408371 
 
 
-
 
NC_013501  Rmar_2782  methyl-accepting chemotaxis sensory transducer  36.88 
 
 
601 aa  85.5  0.000000000000001  Rhodothermus marinus DSM 4252  Bacteria  normal  0.163256  n/a   
 
 
-
 
NC_009784  VIBHAR_05387  histidine kinase  32.65 
 
 
589 aa  85.5  0.000000000000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008751  Dvul_2947  methyl-accepting chemotaxis sensory transducer  42.19 
 
 
749 aa  85.5  0.000000000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  0.732257  normal 
 
 
-
 
NC_009457  VC0395_A1006  methyl-accepting chemotaxis protein  30.09 
 
 
411 aa  85.5  0.000000000000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2152  methyl-accepting chemotaxis sensory transducer  41.98 
 
 
474 aa  85.9  0.000000000000001  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000647381  n/a   
 
 
-
 
NC_009901  Spea_2471  methyl-accepting chemotaxis sensory transducer  39.46 
 
 
499 aa  85.1  0.000000000000002  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000502  methyl-accepting chemotaxis protein  33.66 
 
 
589 aa  85.1  0.000000000000002  Vibrio sp. Ex25  Bacteria  normal  0.567249  n/a   
 
 
-
 
NC_009483  Gura_3063  methyl-accepting chemotaxis sensory transducer  37.34 
 
 
533 aa  84.7  0.000000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  0.378908  n/a   
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  29.69 
 
 
630 aa  85.1  0.000000000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  33.83 
 
 
560 aa  84.7  0.000000000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_013922  Nmag_2882  methyl-accepting chemotaxis sensory transducer  32.84 
 
 
526 aa  84.7  0.000000000000002  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_010002  Daci_0740  methyl-accepting chemotaxis sensory transducer  42.61 
 
 
565 aa  84.7  0.000000000000002  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0837  methyl-accepting chemotaxis sensory transducer  43.8 
 
 
566 aa  84.7  0.000000000000002  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0444  methyl-accepting chemotaxis sensory transducer  25.75 
 
 
647 aa  84.7  0.000000000000002  Pseudomonas putida W619  Bacteria  normal  0.414929  normal 
 
 
-
 
NC_012912  Dd1591_0792  methyl-accepting chemotaxis sensory transducer  36.5 
 
 
542 aa  85.1  0.000000000000002  Dickeya zeae Ech1591  Bacteria  normal  0.821346  n/a   
 
 
-
 
NC_013512  Sdel_1073  chemotaxis sensory transducer  39.31 
 
 
633 aa  85.1  0.000000000000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00919731  n/a   
 
 
-
 
NC_008700  Sama_0552  putative methyl-accepting chemotaxis sensory transducer  37.64 
 
 
648 aa  84.7  0.000000000000002  Shewanella amazonensis SB2B  Bacteria  normal  0.283806  decreased coverage  0.00439756 
 
 
-
 
NC_009656  PSPA7_2443  putative chemotaxis transducer  40.58 
 
 
531 aa  84.3  0.000000000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2083  methyl-accepting chemotaxis protein  37.95 
 
 
505 aa  84.3  0.000000000000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  34.01 
 
 
559 aa  84.7  0.000000000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3453  methyl-accepting chemotaxis sensory transducer  33.17 
 
 
532 aa  84.3  0.000000000000003  Geobacter sp. M21  Bacteria  n/a    normal  0.0235494 
 
 
-
 
NC_013223  Dret_0660  methyl-accepting chemotaxis sensory transducer  34.84 
 
 
675 aa  84.3  0.000000000000003  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.84238 
 
 
-
 
NC_008700  Sama_1954  putative methyl-accepting chemotaxis sensory transducer  39.62 
 
 
504 aa  84.3  0.000000000000003  Shewanella amazonensis SB2B  Bacteria  normal  0.0290306  normal 
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  33.9 
 
 
522 aa  84.7  0.000000000000003  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  45.9 
 
 
541 aa  84.3  0.000000000000003  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008463  PA14_28050  putative chemotaxis transducer  33.33 
 
 
531 aa  84.3  0.000000000000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.652078  normal 
 
 
-
 
NC_011126  HY04AAS1_0814  methyl-accepting chemotaxis sensory transducer  44.86 
 
 
685 aa  84.3  0.000000000000003  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.69 
 
 
626 aa  84  0.000000000000004  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_008789  Hhal_1714  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
673 aa  84  0.000000000000004  Halorhodospira halophila SL1  Bacteria  normal  0.712235  n/a   
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  34.13 
 
 
520 aa  84  0.000000000000004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2723  methyl-accepting chemotaxis sensory transducer  29.73 
 
 
522 aa  84  0.000000000000004  Shewanella putrefaciens CN-32  Bacteria  normal  0.471128  n/a   
 
 
-
 
NC_009483  Gura_0476  methyl-accepting chemotaxis sensory transducer  37.16 
 
 
830 aa  84  0.000000000000004  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_002443  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  36.96 
 
 
541 aa  84  0.000000000000004  Vibrio sp. Ex25  Bacteria  unclonable  0.00000057049  n/a   
 
 
-
 
NC_009457  VC0395_A2016  methyl-accepting chemotaxis protein  32.74 
 
 
433 aa  84  0.000000000000004  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000104003  n/a   
 
 
-
 
NC_009718  Fnod_1100  methyl-accepting chemotaxis sensory transducer  30.7 
 
 
465 aa  84  0.000000000000004  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.0274031  n/a   
 
 
-
 
NC_007644  Moth_0384  methyl-accepting chemotaxis sensory transducer  33.71 
 
 
532 aa  84  0.000000000000004  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
533 aa  84  0.000000000000004  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1249  methyl-accepting chemotaxis protein  37.57 
 
 
596 aa  84  0.000000000000004  Vibrio cholerae O395  Bacteria  hitchhiker  0.000483868  n/a   
 
 
-
 
NC_010338  Caul_1141  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.5 
 
 
501 aa  84  0.000000000000004  Caulobacter sp. K31  Bacteria  normal  0.489477  hitchhiker  0.000166409 
 
 
-
 
NC_008609  Ppro_3465  methyl-accepting chemotaxis sensory transducer  40 
 
 
423 aa  84  0.000000000000004  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0295  methyl-accepting chemotaxis sensory transducer  34.57 
 
 
542 aa  83.6  0.000000000000005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.579755 
 
 
-
 
NC_009654  Mmwyl1_0130  methyl-accepting chemotaxis sensory transducer  36 
 
 
671 aa  83.6  0.000000000000005  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1416  methyl-accepting chemotaxis sensory transducer  38.06 
 
 
481 aa  83.6  0.000000000000005  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.493152  n/a   
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
522 aa  83.6  0.000000000000005  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2678  methyl-accepting chemotaxis protein  41.61 
 
 
533 aa  83.6  0.000000000000005  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.221197  n/a   
 
 
-
 
NC_002939  GSU0935  methyl-accepting chemotaxis protein, putative  32.14 
 
 
528 aa  83.6  0.000000000000006  Geobacter sulfurreducens PCA  Bacteria  normal  0.220244  n/a   
 
 
-
 
NC_009485  BBta_2149  hypothetical protein  32.73 
 
 
374 aa  83.2  0.000000000000006  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.393338  normal 
 
 
-
 
NC_012880  Dd703_0496  methyl-accepting chemotaxis sensory transducer  36.94 
 
 
530 aa  83.6  0.000000000000006  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_1449  methyl-accepting chemotaxis sensory transducer  40 
 
 
647 aa  83.6  0.000000000000006  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_0771  methyl-accepting chemotaxis sensory transducer  36.48 
 
 
822 aa  83.6  0.000000000000006  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_1895  methyl-accepting chemotaxis sensory transducer  59.68 
 
 
559 aa  83.6  0.000000000000006  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.191486  n/a   
 
 
-
 
NC_011884  Cyan7425_3745  methyl-accepting chemotaxis sensory transducer  32.83 
 
 
852 aa  83.6  0.000000000000006  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
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