More than 300 homologs were found in PanDaTox collection
for query gene VC0395_A1006 on replicon NC_009457
Organism: Vibrio cholerae O395



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009457  VC0395_A1006  methyl-accepting chemotaxis protein  100 
 
 
411 aa  847    Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0552  putative methyl-accepting chemotaxis sensory transducer  41.26 
 
 
648 aa  102  8e-21  Shewanella amazonensis SB2B  Bacteria  normal  0.283806  decreased coverage  0.00439756 
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  29.07 
 
 
545 aa  101  3e-20  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011138  MADE_03238  chemotaxis sensory transducer  26.05 
 
 
429 aa  100  4e-20  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_0962  MCP-domain signal transduction protein  42.65 
 
 
458 aa  99  1e-19  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1267  methyl-accepting chemotaxis protein  35.05 
 
 
557 aa  98.2  2e-19  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1140  chemotaxis sensory transducer  25.52 
 
 
418 aa  98.6  2e-19  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  30.49 
 
 
629 aa  97.8  3e-19  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_007355  Mbar_A0989  methyl-accepting chemotaxis protein  33.9 
 
 
689 aa  97.8  3e-19  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  30.72 
 
 
632 aa  97.8  3e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  30.49 
 
 
629 aa  97.1  5e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_4454  methyl-accepting chemotaxis sensory transducer  37.79 
 
 
653 aa  96.7  6e-19  Pectobacterium wasabiae WPP163  Bacteria  normal  0.625525  n/a   
 
 
-
 
NC_009654  Mmwyl1_2773  methyl-accepting chemotaxis sensory transducer  32.07 
 
 
540 aa  97.1  6e-19  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  30.58 
 
 
632 aa  95.9  1e-18  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_009665  Shew185_1950  methyl-accepting chemotaxis sensory transducer  50 
 
 
664 aa  95.9  1e-18  Shewanella baltica OS185  Bacteria  normal  0.0377955  n/a   
 
 
-
 
NC_012917  PC1_4172  methyl-accepting chemotaxis sensory transducer  35.89 
 
 
653 aa  96.3  1e-18  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0068  methyl-accepting chemotaxis sensory transducer  40.52 
 
 
648 aa  95.9  1e-18  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2369  methyl-accepting chemotaxis sensory transducer  50 
 
 
664 aa  95.9  1e-18  Shewanella baltica OS223  Bacteria  normal  0.0315396  normal  0.0961625 
 
 
-
 
NC_009997  Sbal195_1957  methyl-accepting chemotaxis sensory transducer  50 
 
 
664 aa  95.5  1e-18  Shewanella baltica OS195  Bacteria  normal  0.257458  normal  0.211978 
 
 
-
 
NC_013421  Pecwa_1940  methyl-accepting chemotaxis sensory transducer  44.53 
 
 
560 aa  95.1  2e-18  Pectobacterium wasabiae WPP163  Bacteria  normal  0.364705  n/a   
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  29.86 
 
 
545 aa  95.1  2e-18  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_007005  Psyr_3114  histidine kinase, HAMP region: chemotaxis sensory transducer  32.69 
 
 
541 aa  94.7  2e-18  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.860602  normal 
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  30.66 
 
 
629 aa  94.7  2e-18  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_007005  Psyr_5004  chemotaxis sensory transducer  35.03 
 
 
672 aa  95.5  2e-18  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.71371 
 
 
-
 
NC_009052  Sbal_1924  methyl-accepting chemotaxis sensory transducer  50 
 
 
531 aa  95.5  2e-18  Shewanella baltica OS155  Bacteria  normal  0.666083  n/a   
 
 
-
 
NC_009831  Ssed_0529  methyl-accepting chemotaxis protein-like protein  29.67 
 
 
677 aa  95.1  2e-18  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_2737  methyl-accepting chemotaxis sensory transducer  32 
 
 
452 aa  95.1  2e-18  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00060467  n/a   
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  29.87 
 
 
629 aa  95.1  2e-18  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_003295  RSc1234  methyl-accepting chemotaxis transmembrane protein  34.27 
 
 
514 aa  94.7  3e-18  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  33.78 
 
 
554 aa  94.4  3e-18  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  34.23 
 
 
553 aa  94.7  3e-18  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  29.87 
 
 
629 aa  94.4  3e-18  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_011126  HY04AAS1_0194  methyl-accepting chemotaxis sensory transducer  34.44 
 
 
622 aa  94.4  3e-18  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00784755  n/a   
 
 
-
 
NC_009718  Fnod_0170  methyl-accepting chemotaxis sensory transducer  33.73 
 
 
604 aa  94.4  4e-18  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.000484425  n/a   
 
 
-
 
NC_013216  Dtox_0652  methyl-accepting chemotaxis sensory transducer  27.27 
 
 
520 aa  93.6  5e-18  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0957566  hitchhiker  0.0000000067445 
 
 
-
 
NC_012039  Cla_1204  MCP-domain signal transduction protein  47.97 
 
 
431 aa  93.6  5e-18  Campylobacter lari RM2100  Bacteria  normal  0.302368  n/a   
 
 
-
 
NC_009439  Pmen_4367  methyl-accepting chemotaxis sensory transducer  36.84 
 
 
524 aa  93.2  7e-18  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_0489  methyl-accepting chemotaxis sensory transducer  28.22 
 
 
660 aa  93.2  7e-18  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1322  methyl-accepting chemotaxis sensory transducer  42.96 
 
 
667 aa  93.2  7e-18  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  41.45 
 
 
570 aa  93.2  7e-18  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_009654  Mmwyl1_1582  methyl-accepting chemotaxis sensory transducer  28.92 
 
 
678 aa  93.2  8e-18  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.85269 
 
 
-
 
NC_003910  CPS_2050  methyl-accepting chemotaxis protein  45.8 
 
 
704 aa  92.8  9e-18  Colwellia psychrerythraea 34H  Bacteria  normal  0.459277  n/a   
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  35.53 
 
 
662 aa  92.8  9e-18  Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_009483  Gura_0960  methyl-accepting chemotaxis sensory transducer  49.12 
 
 
666 aa  92.4  1e-17  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000181378  n/a   
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
533 aa  92.8  1e-17  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0922  methyl-accepting chemotaxis sensory transducer  30.57 
 
 
656 aa  92.4  1e-17  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4441  methyl-accepting chemotaxis sensory transducer  42.95 
 
 
654 aa  92.4  1e-17  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03718  putative chemotaxis sensory protein  29.46 
 
 
540 aa  92  1e-17  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2372  methyl-accepting chemotaxis sensory transducer  28.21 
 
 
657 aa  92.4  1e-17  Pectobacterium wasabiae WPP163  Bacteria  normal  0.63052  n/a   
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  38.78 
 
 
411 aa  92.4  1e-17  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_0515  methyl-accepting chemotaxis sensory transducer  30.57 
 
 
656 aa  92.4  1e-17  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3237  methyl-accepting chemotaxis protein  44.92 
 
 
771 aa  91.7  2e-17  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0009  methyl-accepting chemotaxis sensory transducer  30.57 
 
 
661 aa  91.7  2e-17  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_1872  methyl-accepting chemotaxis sensory transducer  28.81 
 
 
721 aa  91.7  2e-17  Pseudomonas putida F1  Bacteria  normal  normal  0.163736 
 
 
-
 
NC_013411  GYMC61_1248  methyl-accepting chemotaxis sensory transducer  29.72 
 
 
417 aa  91.7  2e-17  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_2282  methyl-accepting chemotaxis sensory transducer  51 
 
 
664 aa  91.7  2e-17  Shewanella woodyi ATCC 51908  Bacteria  normal  0.330304  normal 
 
 
-
 
NC_009439  Pmen_1800  methyl-accepting chemotaxis sensory transducer  41.18 
 
 
521 aa  92  2e-17  Pseudomonas mendocina ymp  Bacteria  normal  0.258308  normal  0.504821 
 
 
-
 
NC_009253  Dred_2857  methyl-accepting chemotaxis sensory transducer  31.98 
 
 
520 aa  91.3  2e-17  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.000607785  n/a   
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  54.95 
 
 
636 aa  92  2e-17  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
NC_012793  GWCH70_0373  methyl-accepting chemotaxis sensory transducer  40.44 
 
 
417 aa  91.7  2e-17  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1568  methyl-accepting chemotaxis sensory transducer  50 
 
 
667 aa  91.3  3e-17  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  34.76 
 
 
624 aa  91.3  3e-17  Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_003909  BCE_0470  methyl-accepting chemotaxis protein, putative  29.83 
 
 
430 aa  90.9  3e-17  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1246  methyl-accepting chemotaxis sensory transducer  53.33 
 
 
522 aa  91.3  3e-17  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_0968  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.58 
 
 
594 aa  91.3  3e-17  Methanosphaerula palustris E1-9c  Archaea  normal  0.769454  normal 
 
 
-
 
NC_007519  Dde_0369  methyl-accepting chemotaxis sensory transducer  49.49 
 
 
611 aa  91.3  3e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1290  methyl-accepting chemotaxis sensory transducer  53.33 
 
 
522 aa  91.3  3e-17  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1669  methyl-accepting chemotaxis sensory transducer  43.07 
 
 
560 aa  90.9  3e-17  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1459  methyl-accepting chemotaxis protein  38.99 
 
 
626 aa  91.3  3e-17  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  35.39 
 
 
638 aa  91.3  3e-17  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_011832  Mpal_0966  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.58 
 
 
595 aa  91.3  3e-17  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_009997  Sbal195_1324  methyl-accepting chemotaxis sensory transducer  53.33 
 
 
522 aa  90.9  3e-17  Shewanella baltica OS195  Bacteria  normal  normal  0.0159359 
 
 
-
 
NC_002947  PP_2643  methyl-accepting chemotaxis sensory transducer  39.57 
 
 
550 aa  90.9  4e-17  Pseudomonas putida KT2440  Bacteria  normal  0.0855376  normal 
 
 
-
 
NC_009512  Pput_2149  methyl-accepting chemotaxis sensory transducer  39.57 
 
 
541 aa  90.9  4e-17  Pseudomonas putida F1  Bacteria  normal  0.608007  normal 
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.33 
 
 
624 aa  90.5  4e-17  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_009654  Mmwyl1_3709  methyl-accepting chemotaxis sensory transducer  35.98 
 
 
707 aa  90.9  4e-17  Marinomonas sp. MWYL1  Bacteria  normal  0.852924  normal  0.967698 
 
 
-
 
NC_013422  Hneap_1547  methyl-accepting chemotaxis sensory transducer  29.6 
 
 
407 aa  90.9  4e-17  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1693  methyl-accepting chemotaxis sensory transducer  31.09 
 
 
598 aa  90.9  4e-17  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0850375  n/a   
 
 
-
 
NC_008321  Shewmr4_1155  methyl-accepting chemotaxis sensory transducer  53.93 
 
 
523 aa  90.5  4e-17  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_011126  HY04AAS1_0311  methyl-accepting chemotaxis sensory transducer  35.78 
 
 
553 aa  90.5  4e-17  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.000172296  n/a   
 
 
-
 
NC_011663  Sbal223_3064  methyl-accepting chemotaxis sensory transducer  53.33 
 
 
522 aa  90.9  4e-17  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000000699577 
 
 
-
 
NC_011313  VSAL_II0756  methyl-accepting chemotaxis protein  29.64 
 
 
558 aa  90.9  4e-17  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.77 
 
 
630 aa  90.9  4e-17  Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_009654  Mmwyl1_2432  methyl-accepting chemotaxis sensory transducer  32.98 
 
 
555 aa  90.5  5e-17  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.0013651  normal  0.119091 
 
 
-
 
NC_008043  TM1040_3177  methyl-accepting chemotaxis sensory transducer  43.94 
 
 
749 aa  90.5  5e-17  Ruegeria sp. TM1040  Bacteria  normal  0.726311  normal 
 
 
-
 
NC_009438  Sputcn32_0776  methyl-accepting chemotaxis sensory transducer  36.99 
 
 
526 aa  90.5  5e-17  Shewanella putrefaciens CN-32  Bacteria  normal  0.534221  n/a   
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  36.81 
 
 
536 aa  90.5  5e-17  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_009654  Mmwyl1_1465  methyl-accepting chemotaxis sensory transducer  43.33 
 
 
538 aa  90.5  5e-17  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1220  methyl-accepting chemotaxis sensory transducer  40.28 
 
 
706 aa  90.1  6e-17  Shewanella baltica OS195  Bacteria  normal  normal  0.46231 
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  34.33 
 
 
624 aa  90.1  6e-17  Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_009486  Tpet_0900  methyl-accepting chemotaxis sensory transducer  29.69 
 
 
655 aa  90.1  6e-17  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1187  methyl-accepting chemotaxis sensory transducer  40.28 
 
 
706 aa  90.1  6e-17  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3316  methyl-accepting chemotaxis sensory transducer  36.88 
 
 
431 aa  90.1  6e-17  Geobacillus sp. WCH70  Bacteria  normal  0.613067  n/a   
 
 
-
 
NC_011146  Gbem_0771  methyl-accepting chemotaxis sensory transducer  28.35 
 
 
822 aa  90.1  7e-17  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2119  methyl-accepting chemotaxis sensory transducer  49.12 
 
 
548 aa  90.1  7e-17  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3170  methyl-accepting chemotaxis sensory transducer  40.28 
 
 
706 aa  90.1  7e-17  Shewanella baltica OS223  Bacteria  normal  normal  0.942476 
 
 
-
 
NC_008345  Sfri_1146  methyl-accepting chemotaxis sensory transducer  51.65 
 
 
668 aa  90.1  7e-17  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.970933  n/a   
 
 
-
 
NC_009831  Ssed_1012  hypothetical protein  38.46 
 
 
626 aa  90.1  7e-17  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  38.78 
 
 
533 aa  89.7  7e-17  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_008577  Shewana3_3924  methyl-accepting chemotaxis sensory transducer  34.31 
 
 
527 aa  89.7  7e-17  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
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