Gene TRQ2_0515 details

Gene Information

• Locus tag: TRQ2_0515
• ID: 6091930
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: +
• Start bp: 516573
• End bp: 518543
• Gene Length: 1971 bp
• Protein Length: 656 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 642487702
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001738554
• Protein GI: 170288316
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTTTGA GATTGAAAGT CTTAATTATA ATGTTAGTCC TCGCATCTGG ATTGATCATA 
AGCTTTGGTT TCCTCTACAA TAATGTCTCT ACATCGATAA TTAACACTGT TAAAGAAAGC 
ATATCAAACC AAACGAGTGC TCTCTCAAAA TTCATTTCCG AAAAAATCGT GAACATCACA 
AACATATCAA AAGCAGCTGC CACCTATCTT GGTTCGCAAT TTTTTGAGGC ATTCATGATA 
GCGAATCAGA TGAAGCCAAC TGTTGAGAAA GATCAGGGAA CTTTTGCTTT TGGTTTTGCT 
GTCCTTACCC TGAACAAAAG TGCCGCCACT GTTACCAAAG AAAGAACGGT GAGAGAAGAT 
TACAGTAAAT ATGAGAGGTA CGTTAAACTG GTCGAAAACA AAGATTACGT TTTGATACCA 
GAAACCTTTC AGGGAACGCC CGTCCTGACC GTAGTGGTTC CCATAGAAAC TATGAATACC 
CGTACCGGGA TTGTGGGTTT TGGAATAAAT CTTTCCGAAA ACTCTGATCT CTGGAAGGCA 
GTTGTAGAAG AAGGGAAAGC GAGCAAGAGC GGCTACGGGC TTCTTGTCAC AAGCGACGGG 
AAAGTACTGA TTCACAAAGA CATGGGAAAC TTCATGAAAG ACGTGAAGGA GCTTGGAGAC 
TTTGAGAGAG CATTCGAGGA AGCAAAGAAA GGTGGAGAGA AATACGTAGA GTACGAATAC 
AACGGAGAGA AGAAATACAC CGTGTGGGAG AAAGTGCCCG GATACGACTT CTACATCTTC 
TCGACGGGGT ACCTGGATGA ACTTCTTGCA GAAGGAAGGA AAGCGACCTT TGGGACGATA 
GTGACGTATG TAGTGTTTGG CGGCGTGATC TTTGCGGTGT TGTTTGTTTC GATGATGCCG 
ATAGTGAAGA GAATGAGGCA GCAGGTAGAG AAAGTGAAGA GATTCGGAGA AGGGGACCTG 
ACAGTAGAGT TCGAAGCGAA AGGGAAAGAT GAACTGACCC AGATAGAAGA GAGCCTGAAA 
GAAGCGGTAC TATCACTCAA AGAGATGATA GTGAGCATCA TAGAAGCTTC GAAAGAGCTT 
AGCGGAGCAT CAGAAGAGAT AAAAGTTCTC TCAGAAGAGA GCCACAAGAT GTCAGAGAAC 
CTGCACGAAG AAGCCAAGAA GATACTGGAC GAGGCGAACA ACATGAGCAG TGCGCTGACA 
GAAGTGACGA GTGGCGTAGA AGAAGTGGCA GCGAGTGCGC AGAACATTTC AAAGATCACC 
CAGGATCTGA CAGAAAGGTC AGAAGCGGTG ACGAAAGCGG CAAGAGAAGG AACAGAGAGA 
GTAGAAGCGG TGGGAGGAGT CATAAACAAA CTCAAAGGGT CAGCAGAAAG ACAGAGGGAC 
TACCTGAGAG AACTCGTTGA CTCAGCCAAG ACGATAGGGG AGATAGTGGA CACGATCAGC 
TCGATAGCAG AGCAGACGAA CCTACTTGCC TTGAACGCAG CGATAGAAGC AGCTCGAGCT 
GGGGAAGCGG GAAGGGGCTT TGCGGTTGTG GCAGACGAGA TAAGGAAACT TGCAGAAGAG 
AGCCAGAGGG CGACAGAAGA CATAGCGAAG ATGTTGAGCA GTTTGAGGGC AACGATAGAA 
CACGTGGAGA ACGGCTCGAA AGAGATGTTC GAAGGAGTGG ACGAGATAGC GGTGATGGGA 
GAAGAAGTCA CAAAGAGGTT CAGGGAGATC CTTGGAAGGA TAGAAGAGAT CAACAGCATG 
ATAGAGAACA CAGCTGCCAC TGCGCAGGAG CAGGGAGCGG CTGCAGAAGA AATGGCAAGC 
GCTATGGACA ACGTCACAAA GATAGTCGAA GGAGTTGTGG AAAGTCTAAA CAGAATGGAG 
TCTCTCATAG AAGATCAGAC CGAATCTGCT GCCAAGGTCT TTCAGGCCGC TGAAAGACTG 
TCTGAGCTTT CTGAACAGCT CTCAGCACTC GTTCAGAAGT TCAAAGTGTG A 

 

Protein sequence

MSLRLKVLII MLVLASGLII SFGFLYNNVS TSIINTVKES ISNQTSALSK FISEKIVNIT 
NISKAAATYL GSQFFEAFMI ANQMKPTVEK DQGTFAFGFA VLTLNKSAAT VTKERTVRED 
YSKYERYVKL VENKDYVLIP ETFQGTPVLT VVVPIETMNT RTGIVGFGIN LSENSDLWKA 
VVEEGKASKS GYGLLVTSDG KVLIHKDMGN FMKDVKELGD FERAFEEAKK GGEKYVEYEY 
NGEKKYTVWE KVPGYDFYIF STGYLDELLA EGRKATFGTI VTYVVFGGVI FAVLFVSMMP 
IVKRMRQQVE KVKRFGEGDL TVEFEAKGKD ELTQIEESLK EAVLSLKEMI VSIIEASKEL 
SGASEEIKVL SEESHKMSEN LHEEAKKILD EANNMSSALT EVTSGVEEVA ASAQNISKIT 
QDLTERSEAV TKAAREGTER VEAVGGVINK LKGSAERQRD YLRELVDSAK TIGEIVDTIS 
SIAEQTNLLA LNAAIEAARA GEAGRGFAVV ADEIRKLAEE SQRATEDIAK MLSSLRATIE 
HVENGSKEMF EGVDEIAVMG EEVTKRFREI LGRIEEINSM IENTAATAQE QGAAAEEMAS 
AMDNVTKIVE GVVESLNRME SLIEDQTESA AKVFQAAERL SELSEQLSAL VQKFKV