Gene Spea_1322 details

Gene Information

• Locus tag: Spea_1322
• ID: 5661721
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: -
• Start bp: 1614466
• End bp: 1616469
• Gene Length: 2004 bp
• Protein Length: 667 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641235885
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001501184
• Protein GI: 157961150
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTATA AAAATTGGCC AATAGCCAAA CAAATAGGCT TACTCGCTTT ACTACTAACC 
GTAGTCGTTT TTGGTTTTCT CGGTTGCGTC TCCTACTTAA CCGCCTCCGA TGTACTAAGA 
GATAAAGGGA TCAGCGCTAT GAAAGCGCAA ACGGAAGGCA CTGCAGACTT GATTGAGCTG 
CAATATGAAA GCCTACTTTC ACTCGCCAAA CGTAATGCCG ATGTATTTCG CTCTATGTAC 
CCAGGTGACT TCTATAAACC GAATAAAACC GTCAGAGTGA TGGGAGTAGA GACTCCAGCA 
CTGAGGCATA AAAAAGAGCA GATCAACGCA TCAAAAAGTA AGGTCGATCG TTACTCCAAC 
CTTACTGGCG GCAACGCGAC CGTATTTGTC CGAGACGGTG ATAACTTTAT CCGCATCTCC 
ACCTCGCTTA AGAAATCAGA CGGCAAACGT GCTCTTGGCA CTAACTTAGA TAAAGATCAC 
CCAGCCTACA GCGCCGCCTT GAAAGGTCAG AGCTACGAAG GTTACGCCCA GCTATTTGGC 
AAAGATTACA TGACCATTTA CCGCCCGATT AAAAACAGTG GCGGCGAAAC GATCGGCATC 
TTGTATATCG GGTTCGATAT CAGTAGCTCG TTAATTCAAT TACGCGAGGC TATTAATAAA 
CTACAACTGG AAGAATCTGG CAGTTACCTG CTGGTTCATA AGTCAGATTT AACGGTTATT 
TCTCACCCTC AGCATCAACC CGGTGAAAAG GTCTCAACTG AACTGCTCGG CGGCCTCAGT 
ATAGAACAAG CGCTAACTCA CCAAGGCTCA TGGGAATACA CCAACAACCA TGGCGCTAAG 
GCATACGCCT ACACCATTAA TATTCCGGGT TGGGATTGGT CGCTAATCGG TCAAGTCGAT 
GCCGCAGAGC TTAATGAAGA GAGCGTCAGC CTACTTAATA TCAACATGGC CGTCTCTGTG 
ATTGGCATGA TAGTGATAAC GTTACTGCTA TCGCAAGTAT TGATAAGAGC ACTTAAACCT 
CTAGGCTGCT TGCAAGGTCA ATTAGAGAAG TTAGGAGCTG GCGATCTTTC TCAAACCTTT 
ACCGCAATCA ATACCAATAG CAAAAACGAG GTCGATCTGA TCACCAATAG CACCTCTAAG 
ATGGCAACCA ACTTAAGAGA GCTGATCCTA GCACTACAGC AATCTGTTAC CGCGCTGCAG 
GCTCACTCTA ACCATACCCA AGAAACTGCC CGTCTTAATG GTGAAGAGGC GCAGTCGCTA 
ATGGCACAAA CAGATCAGAT AGCCACTGCC ATCGAGGAGA TGTCAGCTTC GGTACGTGAC 
GTAGCAAACC ATGCCAGTGA AGGCGCGACA ATGAGCCAAC GGGTGGACGA TGCGGCTAAA 
GGAGGCCAGA CAAACTTAAA CGATCTGGTT AATGGCCTAC AAAGCTTGAG TAACCAGTTA 
ACCGACAGCC ACAATAGTGT AGAGATCGTC AATAAAGAGA GCCAAGCAAT TAGTAAGATA 
ACCGAGGTGA TTAACAGCAT TGCCGAGCAA ACCAATCTTC TTGCGCTAAA TGCGGCAATT 
GAAGCCGCTA GAGCAGGCGA GCAAGGCCGT GGCTTTGCCG TAGTCGCCGA TGAGGTGCGC 
ACTCTCGCCC AACGCACGCA AACCTCTATC GCCGAGATCT CTCAAACCAT CACTCAGCTG 
CAATCCCAAG TAAAGTTCAC TACTGAGCAG ATGAATCAAA GTAATGAACT GGGGGATGTA 
TCTGCGGCGC AAGGCAACGA AGCGATTGCT CAGCTGCTAG AGATCAACAC CAGTATCGCA 
GAGCTCGCAG CAACCTCAAC CAGTATCGCC AGTGCCACTG AGCAGCAAAG CGCCGTCGCG 
GAAGAGATCA CCCGTAATCT GCATCAAATC ACCGAGCTTG CAAGAGACGG TGAGCAACGT 
GCTGGAGAGA GTGTCGATTC GGCAGAAAGC CTAGCGACAA TAGCTAACGA GATTAATGCT 
AAGATCAGCG TGTTTAAGGC GTAA 

 

Protein sequence

MNYKNWPIAK QIGLLALLLT VVVFGFLGCV SYLTASDVLR DKGISAMKAQ TEGTADLIEL 
QYESLLSLAK RNADVFRSMY PGDFYKPNKT VRVMGVETPA LRHKKEQINA SKSKVDRYSN 
LTGGNATVFV RDGDNFIRIS TSLKKSDGKR ALGTNLDKDH PAYSAALKGQ SYEGYAQLFG 
KDYMTIYRPI KNSGGETIGI LYIGFDISSS LIQLREAINK LQLEESGSYL LVHKSDLTVI 
SHPQHQPGEK VSTELLGGLS IEQALTHQGS WEYTNNHGAK AYAYTINIPG WDWSLIGQVD 
AAELNEESVS LLNINMAVSV IGMIVITLLL SQVLIRALKP LGCLQGQLEK LGAGDLSQTF 
TAINTNSKNE VDLITNSTSK MATNLRELIL ALQQSVTALQ AHSNHTQETA RLNGEEAQSL 
MAQTDQIATA IEEMSASVRD VANHASEGAT MSQRVDDAAK GGQTNLNDLV NGLQSLSNQL 
TDSHNSVEIV NKESQAISKI TEVINSIAEQ TNLLALNAAI EAARAGEQGR GFAVVADEVR 
TLAQRTQTSI AEISQTITQL QSQVKFTTEQ MNQSNELGDV SAAQGNEAIA QLLEINTSIA 
ELAATSTSIA SATEQQSAVA EEITRNLHQI TELARDGEQR AGESVDSAES LATIANEINA 
KISVFKA