Gene MADE_03238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03238 
Symbol 
ID6777059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3495783 
End bp3497072 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content42% 
IMG OID642756688 
Productchemotaxis sensory transducer 
Protein accessionYP_002127526 
Protein GI196158037 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAC TTGAAAAAGC AAAGCAGTAT TACGAAACAG TGCTCGCTGA GAAAATAAAA 
GTGCTTAAGG AAAAGACAGG TAGCATGCAG GATTCGCTTT TACTTTGGGG CGGGCTATTG
AGCGTGGCAT TAGTTGGAAT TGTTGGGTCT TTGAACATTC CTCTTGAGTT AATGGGCGTT
CAAGCTGGTG TCTTAATGAC TATCTTAGGA ATGGCCAGTT TTATGCCATG GTATGTACGC
AGACAAAACC AAGTGTTTAC GAATAAGCTA AAAAGCCAAG AGAGTTATCT GCAGGAAACC
TCCTCACAAT TAAGCGAAAC CCATACTCAG GTTAATGATT ACGTGGCCAT ATTGAAAGGC
CAGATGGACG GCATAAGTGC AATAACTGAA GACGCTTCAA TGGAGCTAAT GAAAGCGCTG
TATGAAATTG AAAGCAGTAT TCAAGATAGT ATAGACAACG TTGAACTAGG CCAGAAAGAT
GCCCTTAGCT GTAAAGAGAA AAGCGCCGAT GAGTTTGAGT TGGCCGCACA GCGCTTGTCT
AACATTAAAG AAATGATACG CACGCAACGG GAACAGCAAA TTGCCGATAC CGAGGCAATT
CAAGGCGTTA TGCGCGAGGT AGAGAACCTT AAAGAACTAA CAGAGCTGGT AAAAAATATT
GCTTCGCAAA CCAATTTATT AGCCCTTAAT GCTGCAATTG AAGCGGCGCG TGCTGGCGAA
TATGGGCGCG GGTTTGCCGT GGTAGCTGAA CAAGTGCGCA TTCTATCGTC TCAGTCCTCA
GATGCAGCAG AAAAAATTGA AACGGGTATT AAATCTGCCC TCGATGCAGC GCATATGCAG
GGCGAAAAAA TGCTGAACTC AACACGAGCA AATGACACGT GCGAATTACT AACAGGGTTT
TCTGAGTCGC TGGAAAATAT AACTGCACAC TATCGTGCAC TAGAAGATCT TAACCCCAAG
ATGCTGGCGT GCTTCTCACA AAGTGCAACA GAGGTTGCAT TTAAAGTAAG TGGGGCAATC
GCAAAAATTC AATTCCAAGA TATTATTCGC CAGCGTACCG AACATGTGAA GCTAGAGCAA
GATGCCATTG TTAGTCTGTT TGGACAGTTT TCTTCTTACA TTAACAACCG CGAGCATTTT
GATGAGTCGT TTAATTTAAG CACCAAAGAA ATGTTTGAAA AATATGTGAT GGAAGACCAG
CGTAAAATCC ACTTTGATAT TAATGAATCT TCGCCAGAAG AAAAGAATGA GTTTGAAGAG
GCAAGAGAGC CTAAGATAGA ACTGTTTTAA
 
Protein sequence
MKVLEKAKQY YETVLAEKIK VLKEKTGSMQ DSLLLWGGLL SVALVGIVGS LNIPLELMGV 
QAGVLMTILG MASFMPWYVR RQNQVFTNKL KSQESYLQET SSQLSETHTQ VNDYVAILKG
QMDGISAITE DASMELMKAL YEIESSIQDS IDNVELGQKD ALSCKEKSAD EFELAAQRLS
NIKEMIRTQR EQQIADTEAI QGVMREVENL KELTELVKNI ASQTNLLALN AAIEAARAGE
YGRGFAVVAE QVRILSSQSS DAAEKIETGI KSALDAAHMQ GEKMLNSTRA NDTCELLTGF
SESLENITAH YRALEDLNPK MLACFSQSAT EVAFKVSGAI AKIQFQDIIR QRTEHVKLEQ
DAIVSLFGQF SSYINNREHF DESFNLSTKE MFEKYVMEDQ RKIHFDINES SPEEKNEFEE
AREPKIELF