| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4441 |
|---|
| Symbol | |
|---|
| ID | 6118797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 5375554 |
|---|
| End bp | 5377518 |
|---|
| Gene Length | 1965 bp |
|---|
| Protein Length | 654 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641636004 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001762788 |
|---|
| Protein GI | 170728762 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTTT TATCCAGCAT CTCAGTCGCT AAAAAATTAT CGATTGCGCC CATAGTATTG
GGACTTATTC TCATTATTAT AACTGTAATA GGAATTAGTG CTCTCAACGG TTTAGCTAGT
CGTATGCACC AGATCACTTT CGATCTTGCA CCGGATACTG AACTCGCTGC GGATATCACA
AGCAGCCTTT ATAGGCTCAG GCTAACGGTG AAAAACTACG TAAAAACAGG TGACGATAAA
TGGGTATCCC AGTTCCAGAC TCAAAGTAAA AACTGGCAAG CGGCACTGGA TAAAGCTTTT
TTGGAGATCC AAAATCCGCA ACGAGTCGCC ATGTTGAATG AAATTAAAAG TAACAAAGAC
ACCTACGTCA GCACTTTTAA TAATATCGTC GTTAGTAATC AACAAAAGCG AAATAAAGCG
GTCACGGAAA CATTAAATGC CCGAGGCCCA GAGATTGAAC GCGGATTAAC TAAAATAATG
CAATCGGCTA ATGACGATGG TGATATCCAC GCTGCATTTC TTGCAGGAAC AGCCATTCGT
AGCCTGCTGC TAGGTAGACT TTATGTATCT AAGTTTCTTG TTGAAAACCA GCCAAGTCAG
GTCGACAGGT TTAATCAAGA GCTAACAGAC ACCACTAAGC AGATCGACAC CTTATTAGAG
AGTTTACAAA ACCCGACTCG CCGAACCTAC GCAACAGAGG CGAAAGCTGA CATTATTAGT
TATACAAACA TTGCTAATAA CGTCTCCACT TATATCAGTA CACGTAATGC AGGTATCAAG
ACTTTAGATA CTATTGGACC TCAAGTTGCC AATCAATTAG ATGAACTAAG AGCATCAATC
GCTGAATCCA TGAGCGCCGC CTCAGACGCT GCTAATGAAT CACAGCAAAC TTCATCGACA
CTACTCTTAA CAGTCGCCTT AATTGCCATC ATATTCGGAT TAACCATCGC CTATATTATC
TCTAGAGCAA TTATCTCTAG CTTAGATTCA ATGAATAAAG TCTTTGCCGA TATTGCACAA
GGCGAAGGCG ATCTCACAAA GCGTATTCCC GTAGCAGGAC AAGATGAGCT CTCACAACTT
GCATCTAGCT TTAACCTCTT TGCTGAGAAG ATACAGAAAA CAGTCATCGA AGTGAGTAAC
TCCACTGAGC AACTGCAATC AGCCTCAGAT GCATTAACCA CTAAAGCTAA AGAGACGCAA
AATGAGGTCA GCCAGCAACA ATCCCAAGCC CAGTTAGCCG CCGCAGCTAT GACAGAGATG
TCAGCCAGTG CCTCAGAAGT AAGTAGTAGC GCTAACCAAG CAAATGATCT CTCCAGTAGC
GCCTTGAGTA CCGCCAGTAC TGGCCGAGAA GTCGTCATAA ATGCAGTAAG TAGTATGAGT
GCTCTTTCAA CTCAGTTAAC GGATTCATCG GGGATCATCG AGAACCTTCG TAAAGACAGT
GAACAGATAG GTACTGTACT TGATGTTATA CGCAGTATTG CAGAACAGAC TAATCTACTG
GCATTGAATG CTGCGATTGA GGCGGCCCGT GCTGGTGAAC AGGGACGAGG TTTTGCGGTC
GTTGCAGATG AGGTTCGATC ATTAGCATCA AGAACCCAGG AATCAACAGA AGAGATTCAA
ACCATAATCC AGACTCTACA ACAGAGATCT GAAAGTGCCT TTAAAGCCAT GACAGAGAGT
TGTGCTAGTG CAGAATCCAC CGCTGAGCTT GTGCAATCTG CCGAGCAATC TCTTGGACAA
ATAGCTGAGT TTATGGATGA GATCAATAAC TCGATTGCCC ACATATCAGA TGCAGCAGGA
CAACAAGCGA CCGTGTCTGA TGAGGTCAGT CAGAATGTCA ACGCAGTCTC AGAGATCTCA
GCGGCAACCT ACGGTCAAAC CGAAGAGACC TGCCTCAGCG CAGAGGAGTT ATCTATTCTT
GGCGACGATC TGGCGAAAAG CGTAAGCCAA TTCAAGATCA GCTAG
|
|---|
| Protein sequence | MQLLSSISVA KKLSIAPIVL GLILIIITVI GISALNGLAS RMHQITFDLA PDTELAADIT
SSLYRLRLTV KNYVKTGDDK WVSQFQTQSK NWQAALDKAF LEIQNPQRVA MLNEIKSNKD
TYVSTFNNIV VSNQQKRNKA VTETLNARGP EIERGLTKIM QSANDDGDIH AAFLAGTAIR
SLLLGRLYVS KFLVENQPSQ VDRFNQELTD TTKQIDTLLE SLQNPTRRTY ATEAKADIIS
YTNIANNVST YISTRNAGIK TLDTIGPQVA NQLDELRASI AESMSAASDA ANESQQTSST
LLLTVALIAI IFGLTIAYII SRAIISSLDS MNKVFADIAQ GEGDLTKRIP VAGQDELSQL
ASSFNLFAEK IQKTVIEVSN STEQLQSASD ALTTKAKETQ NEVSQQQSQA QLAAAAMTEM
SASASEVSSS ANQANDLSSS ALSTASTGRE VVINAVSSMS ALSTQLTDSS GIIENLRKDS
EQIGTVLDVI RSIAEQTNLL ALNAAIEAAR AGEQGRGFAV VADEVRSLAS RTQESTEEIQ
TIIQTLQQRS ESAFKAMTES CASAESTAEL VQSAEQSLGQ IAEFMDEINN SIAHISDAAG
QQATVSDEVS QNVNAVSEIS AATYGQTEET CLSAEELSIL GDDLAKSVSQ FKIS
|
|---|
| |