| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0966 |
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| Symbol | |
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| ID | 7272746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 997110 |
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| End bp | 998897 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643569605 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_002466041 |
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| Protein GI | 219851609 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCATG TTCTTCTCGA TAAGGAACTG AAGATCGTGG ATGGCAATGA GAGTTATTTC
CAACTTGTCG GGTACACACG TGAGCGTGTT ACCGGGATGC CTTTCTCCGA TTACCGGACA
ACAGGAATGC TCAATTATAT CAAGGAGACC GGCGGTACGC TCAAAGAGTC GTTTGATAAA
AAGATTACCA TCAGCGGACA GACCAAGATG GGATCTCCTA CCGGGGTGTA CGATCTCATT
CGGACGTATG TTCCGATCCT CGATGAACAT GGCGATATAA AATATATCTA TATTGCAAAT
TTTGATATCA CCGAAACCGT CAGACTGGGT GAGGAAGCGG TCGACAGGGC TGTTTATTAC
GAGTCGATTC TGGATGCAAT TCAGAATCCT GTCACGGTGA CCGACCTTGA GGGGAAAATG
ACGTTTGTCA ATAAGGCCGT CGAAGATCAG CTCAAAACGC CTCGGAAGGA ACTCATTGGT
AAGCCCTGTA ACAAACGGGG AGGGAGTACC TGCACGACCG ATCAGTGTGG TATCACCCGG
CTGAAGCAGG GGTTCACCAC CACCAGCGTC GAGCAGGATG GTGGATTCTT CACCTTCGAT
TGTTCATATA TCCAGAACGC AAAGGGTGAG AACGTTGGGC ATGTCGAAGT GATCTCGGAT
GTTACAGCAC TCACCGAAAC ACAGAATTAT ATTGAGACCG AGATCGCAGA ACTCTCAACA
CGGTACGAAT TGATGGCTGC GGGCGATCTC ACGATCCGCT ATGACCTGAC AGAACCCGAT
GATCAGACCA GAATCATCCA TGATCACCTG GAGAAACTCC ATAGTGCGGT CCGTTCTACG
ATCACCAGCC TTCAAAAGAA TATCGGTGAT GTCAACAAAG AGATGATCGA CCTGACCACC
ACGGCAGACA ACGCGAACAA CAGTATTCTG GATGCGAGTA AAGGGCTCCA GCAGGTGGCT
AAAAATGCCG GCAATGTCTG TTCTGATGCA GAGAAGGCTT CTGATGGCGT TGAACAGATC
TCGAAGGCGA TGCAGGACAT GAGTGCTGCC GTTGAAGAGA TCACCTCGAG CATGGAATCG
GTCTCAGTTC TCTCCCAGGA GACGAATGTT CTCTCCCGGA AGGGTGCAGA ACTGGCCGGC
AAAACAGAGA AGAGCATGGT GGAGATCACG AGTTCATCTG CAAAGGTGTT CGATATCGTC
ACTGATGTTG AAAAGCAGAT GGGTGAGATC TCCAAGATCG TCGTTCTCAT TCGCGACCTC
GCCAACCAGA CCAACCTGCT CGCACTGAAT GCAGCGATCG AAGCGGCCCG AGCCGGGGAT
GCCGGTCGCG GATTCGCCGT GGTCGCCACC GAGGTGAAGT CCCTCGCCCA GGAATCCCGG
AACTCGGCAG AGCGCATTGA GGAGATGATC GGTAACCTGA AGAAGAATAC CCAGCATGCC
TCCACTGCGA TGGGGGAGGC GAAGGGTACT GTTGAACAGG GCTCACAGAT GGTCACCGAG
ACGCTGCAGT CCTTCAATCA GATCGCACTA GAGGTCGGAA AGATCGCTAA GAGTGTGTCA
GAAGTGGCAG CTGCGACCGA GGAACAGGCT GCGACGACGG AGGAGGTCAC CGCCAGTATC
ACGGAAGTCG CCCGTTTGGT GGACCAGACT GCACGGGAGG CCGGTGATGC AGCGGCGGCC
ACTGAAGAGT CCACTGCTTC CCTTGATGAA ATCACCCGGA TGGTTGGTGA AGTGAATAAA
GTCGCAGTCA ACGCAATGGA AGCAAACAAG AGATTTAAGG TGGACTAG
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| Protein sequence | MAHVLLDKEL KIVDGNESYF QLVGYTRERV TGMPFSDYRT TGMLNYIKET GGTLKESFDK
KITISGQTKM GSPTGVYDLI RTYVPILDEH GDIKYIYIAN FDITETVRLG EEAVDRAVYY
ESILDAIQNP VTVTDLEGKM TFVNKAVEDQ LKTPRKELIG KPCNKRGGST CTTDQCGITR
LKQGFTTTSV EQDGGFFTFD CSYIQNAKGE NVGHVEVISD VTALTETQNY IETEIAELST
RYELMAAGDL TIRYDLTEPD DQTRIIHDHL EKLHSAVRST ITSLQKNIGD VNKEMIDLTT
TADNANNSIL DASKGLQQVA KNAGNVCSDA EKASDGVEQI SKAMQDMSAA VEEITSSMES
VSVLSQETNV LSRKGAELAG KTEKSMVEIT SSSAKVFDIV TDVEKQMGEI SKIVVLIRDL
ANQTNLLALN AAIEAARAGD AGRGFAVVAT EVKSLAQESR NSAERIEEMI GNLKKNTQHA
STAMGEAKGT VEQGSQMVTE TLQSFNQIAL EVGKIAKSVS EVAAATEEQA ATTEEVTASI
TEVARLVDQT AREAGDAAAA TEESTASLDE ITRMVGEVNK VAVNAMEANK RFKVD
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