Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1872 |
Symbol | |
ID | 5190532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2144419 |
End bp | 2146584 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640586337 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001267205 |
Protein GI | 148547103 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.163736 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTTT CCAGTGGTTC GATGCAGTTA TCGTCGAGTG AAAAGGGTTG GCTGCCGTGG TTTGGCAAAA CCGGCAAATT CAGCATGGGC TGGGCGTGCC GCCTTAATCG GGCCAGTTAC CCGCAGGTCG AGCAAACGTT CGAAGCCATC GCCCAGACCC GCGTGCAGTT GCTGCATGAG TGGGTGCGCG AGCAGTGGGA ACACCTGGCC GACCTGGCCG AGCAGGTGGC GCCCGGGCTC GCTCAAGTCG ATAGCGCAAT GTTGCGCAAC ACGCTGGCCC AGGCTGAGGA CTTTTCCGAG CTGTTTGTCG TCGATGCCCA CGGCATCGTC ATCGCTTCGA CCTGGCCCCA GCGTGGCACG CCACGCATCG AGCACTTGGC AGCCCTGGCG CAAGGGCTGA AAGCACCGTT TCTGCACGGG CCCTACAGCG ACCCGCTGAC CTTGCAGGTC GGCCCGTCTT CCTCGCGCTT CCACGATGAA GTCACGTTGA TGTTCTACCA GCCCCTGATG CACGAGAGCA AAGTGCTAGG TTGTTTGTGT GGGCGGGTGC CCAACGATGT GCTGGGTGAC CTGATCCAGC GCGAGGCAGG GCACATTTAC CCCGAGTCGG GCGACAACTA CCTGTTCATG GCGCAATCGC GCTTCGACCC TGGCATACAG CCCGGTACCG CGTTGTCCCG TTCGCGCTTC GAGGACGCCA CCTTCACCCA TGGCGAAAAC CTCAAGAACG GTGTGCACAC CCCCTGGACC ACCGTGCAGG TCCAGCGTCA TACCGAGCTG GAGCTTCGTT TCACCGACCC TTCCACGCGG GAACTGCACC CTGGCGTGAG GGAGACGATC AGGCGGGGTG CCAACCTGTT CGTGACCTAC CCCGGCTATT CCGACTACCG TCATGTGCCA GTGGTGGGCA AGGGCGTGAC CTTCCAGTTG CCAGGCTCAC CCGACCGCTG GGGCATGATG TGCGAGGCAG ATCTGGAGGA GGTCTATCGC CGGCGTTCGC TGAGCTACGG GTTGATGAAA CCCTATGTGG CGATCATGGC GGGGCTGTTC GGCTGCAATT ACTGGGTGCA GCACTATGCA GGCCTGCCGC AAGGACTGAC TGACGCGATC GAGGCCTTGA GCATGCTGGG CGCCACCTTG TTGTTCGGCG TGCTCGGGCC CAAGCGCCTG GCCGCCAGGT TGAATGGCAT GAGCAGTGTG CTGTGCACCA TCGCCGAGGG TGAAGGCAAC CTGCGCCAGC GCCTGGATAC CAGTACCTTG GCCAATGATG AGAGCGGCGA CATGGCGCGC TGGATCAACA GCTTCATCGA CCGCCTGGAC ACGGTGGTCG GGCAGGTGGT CAAGGCCAGT CGCACGGTTG GCAGCACCAA CCAGATGATG CTCGGGCGCA GCCAGGAGGC CAGCGTAAGC TCCGCCGACG TGGCCGACGC CGTGCACCAG ATGATGATCA TCATGGAAGA GCAACTCGGC GAACTGCAGC AGGCCTCGGT CAGCGCCGAG CAGATGAAAC AGGCCATGGA CGAAGTGGTC AGCCGCGCAC GCGCGCAGTA CCAGGCGGTG CAGGCGGGCA CCCAGTCGAT CCGCGATGTG GTGGCGCGCT CATCATCCAG CGTGCAACGG CTCGACAGCC GCATGGTCGA GATCGACAAC ATCACCGGGT TGATCAGCGA AATCACCAAC CAGACCAACC TGCTGGCGCT CAATGCCGCT ATCGAGGCGG CGCGGGCCGG GGAGCATGGT CGTGGCTTCG CGGTGGTGGC CGACGAGGTG CGCAGCCTGG CCGCACGCAC CTCGCGTGCC GCCGACGACA TTCGCCATAT GGTCGAGAGC CTGCAGGGCG AAACCCGGCA GGCGGTAAGC TTCATGGAAC AGGGCGTGCA GGATGTCGAC AACAGCCTGC GCCTGGCGGA GGACGCGTCT TCCGAAAATG TGCAACTGCA CCAGGCGGTG GAGGGCATGT TCGCCATCAT CCAGCAGCTC AACCGTCGCA GCGTGGAATA CGGCAAGACG ATCGAGCAGG TCAACCAGTC CTCCAGCGAG ATGCGCCAGA CCGCCCTGGT GCTGCAAAGC AGTGCGCAGA AGGTGAAGGT GGATGCTGGC AAGTTGCAGA AGCTGGTGGG GCAGTTCGAA GTCAGCGATG ATGGCGAACG AGGCGTCGCT GCTTGA
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Protein sequence | MSLSSGSMQL SSSEKGWLPW FGKTGKFSMG WACRLNRASY PQVEQTFEAI AQTRVQLLHE WVREQWEHLA DLAEQVAPGL AQVDSAMLRN TLAQAEDFSE LFVVDAHGIV IASTWPQRGT PRIEHLAALA QGLKAPFLHG PYSDPLTLQV GPSSSRFHDE VTLMFYQPLM HESKVLGCLC GRVPNDVLGD LIQREAGHIY PESGDNYLFM AQSRFDPGIQ PGTALSRSRF EDATFTHGEN LKNGVHTPWT TVQVQRHTEL ELRFTDPSTR ELHPGVRETI RRGANLFVTY PGYSDYRHVP VVGKGVTFQL PGSPDRWGMM CEADLEEVYR RRSLSYGLMK PYVAIMAGLF GCNYWVQHYA GLPQGLTDAI EALSMLGATL LFGVLGPKRL AARLNGMSSV LCTIAEGEGN LRQRLDTSTL ANDESGDMAR WINSFIDRLD TVVGQVVKAS RTVGSTNQMM LGRSQEASVS SADVADAVHQ MMIIMEEQLG ELQQASVSAE QMKQAMDEVV SRARAQYQAV QAGTQSIRDV VARSSSSVQR LDSRMVEIDN ITGLISEITN QTNLLALNAA IEAARAGEHG RGFAVVADEV RSLAARTSRA ADDIRHMVES LQGETRQAVS FMEQGVQDVD NSLRLAEDAS SENVQLHQAV EGMFAIIQQL NRRSVEYGKT IEQVNQSSSE MRQTALVLQS SAQKVKVDAG KLQKLVGQFE VSDDGERGVA A
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