Gene TRQ2_0009 details

Gene Information

• Locus tag: TRQ2_0009
• ID: 6091408
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: -
• Start bp: 7759
• End bp: 9744
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 642487188
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001738054
• Protein GI: 170287816
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACTTC GTGCGAAGGT TTTCCTTGTT ATACTGGTTG TTCTGGCAGG ACTCCTTGTT 
AGTTTTTATC TCATTTATCA GAGCGTTTCC AGTGCGGTTG TTGAAACTGT CAAAAAGAAT 
GCGACAGTTC AGATTCAGGT TCTTTCGAAT TATTTTGCCG AAAAATTGAA CAAGTACGTA 
GAAAGGGCAG TTGCTCTGAC CCAGTCCATG GAAGCACAGC TCCTCGATAC CTATTCCATG 
GCTTCCAATA TGGTCAAACT GGTGAAAGAA GCTTCCGATA CACTCGTTGC TGGGGTTACA 
CTCGAGGAGA TGACGGGTTC TGGCTACATT GCTAAAGCTG ATGGATTGGA GCAGATTGAT 
TCTTCTTCGA CCATCTATCA AAAATATATG GATCTTGTTA AGAATTCGCA AAATCCATAT 
TTAGTTACCT CGGATGTCTT TGAAGGTAAA CCCGCCCTCG TTGTTTTAGC TCCGCTAGGT 
GCGTTCGGTG CGGGTACGCT CGGTGCGGTG GGCTATGTGA TAGATCTTTC TCAAAACAAG 
AATTTCTGGC GCACGGTGGC AGAAGGAGGA AAACTGGGAG AGAGCGGCTA CGGGCTTCTT 
GTCACAAGCG ACGGAAAGGT ACTGATTCAC AAAGACATGG GAAACTTCAT GAAAGACGTG 
AAGGAGCTGG GCGGCTTTGA GAAAGCATTC GAGGAAGCAA AGAAAGGTGG AGAGAAATAC 
GTAGAGTACG AATACAACGG AGAGAAGAAA TACACCGTGT GGGAAAAAGT GCCCGGATAC 
GACTTCTACA TCTTCTCGAC GGGGGACCTG GATGAACTTC TTGCAGAAGG AAGGAAAGCG 
ACCTTTGGGA CGATAGTGAC GTATGTAGTG TTTGGCGGCG TGATCTTTGC GGTGTTGTTT 
GTTTCGATGA TGCCGATAGT GAAGAGAATG AGGCAGCAGG TAGAGAAAGT GAAGAGATTC 
GGAGAAGGGG ACCTGACAGT AGAGTTCGAA GCGAAAGGGA AAGATGAACT GACCCAGATA 
GAAGAGAGCC TGAAAGAAGC GGTACTATCA CTCAAAGAGA TGATAGTGAG CATCATAGAA 
GCTTCGAAAG AGCTTAGCGG AGCATCAGAA GAGATAAAAG TTCTCTCAGA AGAGAGCCAC 
AAGATGTCAG AGAACCTGCA CGAAGAAGCC AAGAAGATAC TGGACGAGGC GAACAACATG 
AGCAGTGCGC TGACAGAAGT GACGAGTGGC GTAGAAGAAG TGGCAGCGAG TGCGCAGAAC 
ATTTCAAAGA TCACCCAGGA TCTGACAGAA AGGTCAGAAG CGGTGACGAA AGCGGCAAGA 
GAAGGAACAG AGAGAGTAGA AGCGGTGGGA GGAGTCATAA ACAAACTCAA AGGGTCAGCA 
GAAAGACAGA GGGACTACCT GAGAGAACTC GTTGACTCAG CCAAGACGAT AGGGGAGATA 
GTGGACACGA TCAGCTCGAT AGCAGAGCAG ACGAACCTAC TTGCCTTGAA CGCAGCGATA 
GAAGCAGCTC GAGCTGGGGA AGCGGGAAGG GGCTTTGCGG TTGTGGCAGA CGAGATAAGG 
AAACTTGCAG AAGAGAGCCA GAGGGCGACA GAAGACATAG CGAAGATGTT GAGCAGTTTG 
AGGGCAACGA TAGAACACGT GGAGAACGGT TCGAAAGAGA TGTTCGAAGG AGTGGACGAG 
ATAGCGGTGA TGGGAGAAGA AGTCACAAAG AGGTTCAGGG AGATCCTTGG AAGGATAGAA 
GAGATCAACA GCATGATAGA GAACACAGCT GCCACTGCGC AGGAGCAGGG AGCGGCTGCA 
GAAGAAATGG CAAGCGCTAT GGACAACGTC ACAAAGATAG TCGAAGGAGT TGTGGAAAGT 
CTAAACAGAA TGGAGTCTCT CATAGAAGAT CAGACCGAAT CTGCTGCCAA GGTCTCTCAG 
GCCGCTGAAA GACTGTCTGA GCTTTCTGAA CAGCTCTCAG CACTCGTTCA GAAGTTCAAA 
GTGTGA 

 

Protein sequence

MTLRAKVFLV ILVVLAGLLV SFYLIYQSVS SAVVETVKKN ATVQIQVLSN YFAEKLNKYV 
ERAVALTQSM EAQLLDTYSM ASNMVKLVKE ASDTLVAGVT LEEMTGSGYI AKADGLEQID 
SSSTIYQKYM DLVKNSQNPY LVTSDVFEGK PALVVLAPLG AFGAGTLGAV GYVIDLSQNK 
NFWRTVAEGG KLGESGYGLL VTSDGKVLIH KDMGNFMKDV KELGGFEKAF EEAKKGGEKY 
VEYEYNGEKK YTVWEKVPGY DFYIFSTGDL DELLAEGRKA TFGTIVTYVV FGGVIFAVLF 
VSMMPIVKRM RQQVEKVKRF GEGDLTVEFE AKGKDELTQI EESLKEAVLS LKEMIVSIIE 
ASKELSGASE EIKVLSEESH KMSENLHEEA KKILDEANNM SSALTEVTSG VEEVAASAQN 
ISKITQDLTE RSEAVTKAAR EGTERVEAVG GVINKLKGSA ERQRDYLREL VDSAKTIGEI 
VDTISSIAEQ TNLLALNAAI EAARAGEAGR GFAVVADEIR KLAEESQRAT EDIAKMLSSL 
RATIEHVENG SKEMFEGVDE IAVMGEEVTK RFREILGRIE EINSMIENTA ATAQEQGAAA 
EEMASAMDNV TKIVEGVVES LNRMESLIED QTESAAKVSQ AAERLSELSE QLSALVQKFK 
V