Gene Daro_3125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3125 
Symbol 
ID3568176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3368673 
End bp3369896 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content56% 
IMG OID637681596 
Productchemotaxis sensory transducer 
Protein accessionYP_286325 
Protein GI71908738 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value0.443773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA TCGACGACCT GCTGATCTGG CTTACCGCAG CAACATGCCT CCTGTTGTGG 
GTCTGGTCAG CGGTCAGCGG ACCGATCTCG GCACACTTCT TCCTGCTGCT TGCCGGGCTT
GTCATTGCCT CGATCCTGTT TTCATTTCGT GAGCGGAAAC GCTGGAAAGC GCACCAGCAG
AATCACGTTA ATGAACTAAA TGACGTGATG TCCGAATACC ATGTGCTTTC CAACGAGGCT
ATGGCCCATG CCGAATTGCA GTTCACCTCG TTGGAAAAGG ACATGCAGGA AGCGCAGGAA
GTTATTCGCG CGTCGGTCAA CAAGATCTCC GGCAGCCTGA CCGGTCTTGA ATCGCAGTCA
TCCGATCAGC GCCAGGTACT GCGTTCGCTG ATCGATCAGA TGCTGCAAAT GACCGACTCG
GATCACAGCC AGGCCAATTC GCAGGTCAGC CTGCAACGCT TCTTCGACGA AACCAATGCA
CTGATTGCGG AATTCGTCAG CAAGATGACC CAACTGCAAA CAACCAGCCA GGGTATCGCG
CAGAGCTTCG ATCAGATGCA GAATCAGGTG AAGAACATCA CCGGCTCACT CAACGATATC
GCCGGCATCA CCAAGCAGAC CGACCTGCTG GCCCTCAATG CGGCCATCGA AGCCGCTCGT
GCCGGCGAAG CTGGCCGTGG CTTCGCCGTG GTCGCCGATG AAGTGCGCAA TCTCGCCGCC
CGTACCGGCG AATTCAACGT CGATATTCGC GTTGGCCTGA ACGACATCCT GAAATCACTT
CAGGCGGTGG GCGTCCGCAT CGCCGATGCG ACCAACATCG ACATGAGTAT CGCCGAGAAG
TCCCGCACAA CCCTGCACGA ATTGGGCAGC GAGTTACTGG AACTGACCGG CAAGGCGCGC
GAACACTCCG ACCACATCAC GGCAGTCACC GAGCAGATGC ACAATCTGAC GCAGGAAGGC
GTGATGGCCA TGCAGTTCGA AGACATCGTG ACGCAGATGA TGGGACGCAT CAGTCAGCGT
ACCGTCAATG TGGGTGAATA CATGCATGCC TTCCTCGCCC TGCAGCACGA CAACGAATCC
GATGGCCTCC AGCGTTTCCG CAAGCGCAGC CAGAAACTGG TCGAGTTGCT GGTCAATTCC
CACGTCAAGA GTGATGCGAT CCACTCGACC AACGCTGCCA GCCATGCCAA ATCGAGCAGC
GATGGAGAAA TCGAGCTATT CTAA
 
Protein sequence
MKRIDDLLIW LTAATCLLLW VWSAVSGPIS AHFFLLLAGL VIASILFSFR ERKRWKAHQQ 
NHVNELNDVM SEYHVLSNEA MAHAELQFTS LEKDMQEAQE VIRASVNKIS GSLTGLESQS
SDQRQVLRSL IDQMLQMTDS DHSQANSQVS LQRFFDETNA LIAEFVSKMT QLQTTSQGIA
QSFDQMQNQV KNITGSLNDI AGITKQTDLL ALNAAIEAAR AGEAGRGFAV VADEVRNLAA
RTGEFNVDIR VGLNDILKSL QAVGVRIADA TNIDMSIAEK SRTTLHELGS ELLELTGKAR
EHSDHITAVT EQMHNLTQEG VMAMQFEDIV TQMMGRISQR TVNVGEYMHA FLALQHDNES
DGLQRFRKRS QKLVELLVNS HVKSDAIHST NAASHAKSSS DGEIELF