More than 300 homologs were found in PanDaTox collection
for query gene Smal_1917 on replicon NC_011071
Organism: Stenotrophomonas maltophilia R551-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011071  Smal_1917  methyl-accepting chemotaxis sensory transducer  100 
 
 
396 aa  795    Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.386674 
 
 
-
 
NC_010717  PXO_06142  chemotaxis protein  84.43 
 
 
366 aa  629  1e-179  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0352354  n/a   
 
 
-
 
NC_010717  PXO_01024  chemotaxis protein  84.43 
 
 
366 aa  629  1e-179  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0730182  n/a   
 
 
-
 
NC_007520  Tcr_0759  methyl-accepting chemotaxis sensory transducer  35.89 
 
 
406 aa  200  3.9999999999999996e-50  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_2159  methyl-accepting chemotaxis sensory transducer  33.75 
 
 
414 aa  181  2e-44  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0724  chemotaxis sensory transducer  33.23 
 
 
405 aa  160  4e-38  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.435605 
 
 
-
 
NC_009456  VC0395_0155  methyl-accepting chemotaxis protein  35.64 
 
 
384 aa  159  1e-37  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_0260  putative chemotaxis transducer  33.54 
 
 
391 aa  147  4.0000000000000006e-34  Pseudomonas aeruginosa PA7  Bacteria  normal  0.237341  n/a   
 
 
-
 
NC_008463  PA14_02270  putative chemotaxis transducer  34.38 
 
 
390 aa  146  5e-34  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.319109  normal 
 
 
-
 
NC_008321  Shewmr4_2097  methyl-accepting chemotaxis sensory transducer  29.77 
 
 
378 aa  145  2e-33  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1877  methyl-accepting chemotaxis sensory transducer  29.5 
 
 
378 aa  144  2e-33  Shewanella sp. MR-7  Bacteria  normal  0.410986  normal  0.95878 
 
 
-
 
NC_008576  Mmc1_3578  methyl-accepting chemotaxis sensory transducer  33.82 
 
 
331 aa  144  3e-33  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2222  methyl-accepting chemotaxis sensory transducer  29.69 
 
 
378 aa  144  3e-33  Shewanella sp. ANA-3  Bacteria  normal  0.894674  normal 
 
 
-
 
NC_009654  Mmwyl1_3295  methyl-accepting chemotaxis sensory transducer  30.92 
 
 
384 aa  140  3.9999999999999997e-32  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2117  methyl-accepting chemotaxis protein  31.77 
 
 
377 aa  139  7.999999999999999e-32  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_2251  methyl-accepting chemotaxis sensory transducer  32.11 
 
 
380 aa  134  3e-30  Shewanella baltica OS185  Bacteria  normal  0.0952292  n/a   
 
 
-
 
NC_009052  Sbal_2106  methyl-accepting chemotaxis sensory transducer  32.11 
 
 
380 aa  134  3e-30  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2368  methyl-accepting chemotaxis sensory transducer  32.11 
 
 
380 aa  134  3e-30  Shewanella baltica OS195  Bacteria  normal  0.0668336  normal  0.991447 
 
 
-
 
NC_011663  Sbal223_2094  methyl-accepting chemotaxis sensory transducer  32.11 
 
 
380 aa  134  3e-30  Shewanella baltica OS223  Bacteria  normal  0.465964  normal 
 
 
-
 
NC_011138  MADE_00410  methyl-accepting chemotaxis protein  28.78 
 
 
394 aa  129  6e-29  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3111  putative methyl-accepting chemotaxis sensory transducer  31.29 
 
 
397 aa  129  1.0000000000000001e-28  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3125  chemotaxis sensory transducer  32.38 
 
 
407 aa  119  9.999999999999999e-26  Dechloromonas aromatica RCB  Bacteria  normal  0.443773  normal 
 
 
-
 
NC_010483  TRQ2_1321  methyl-accepting chemotaxis sensory transducer  30.77 
 
 
566 aa  110  5e-23  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00082247  n/a   
 
 
-
 
NC_009092  Shew_2952  methyl-accepting chemotaxis sensory transducer  35.23 
 
 
541 aa  105  2e-21  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000751538  normal 
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  32.48 
 
 
647 aa  104  3e-21  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2920  methyl-accepting chemotaxis sensory transducer  32.2 
 
 
544 aa  103  5e-21  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_1365  methyl-accepting chemotaxis sensory transducer  32.84 
 
 
566 aa  103  5e-21  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  32.68 
 
 
544 aa  103  6e-21  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2054  methyl-accepting chemotaxis sensory transducer  31.5 
 
 
539 aa  103  7e-21  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  34.43 
 
 
544 aa  103  7e-21  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0250  methyl-accepting chemotaxis protein  30.71 
 
 
518 aa  102  8e-21  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  32.68 
 
 
544 aa  102  9e-21  Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_008577  Shewana3_1150  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.58 
 
 
522 aa  102  1e-20  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  28.3 
 
 
541 aa  102  1e-20  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_008609  Ppro_3147  methyl-accepting chemotaxis sensory transducer  31.03 
 
 
540 aa  102  1e-20  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0302394  n/a   
 
 
-
 
NC_008321  Shewmr4_1149  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.21 
 
 
522 aa  102  1e-20  Shewanella sp. MR-4  Bacteria  normal  0.737349  normal 
 
 
-
 
NC_008322  Shewmr7_1220  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.21 
 
 
522 aa  102  1e-20  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0916  methyl-accepting chemotaxis protein  31.85 
 
 
394 aa  100  3e-20  Geobacter sulfurreducens PCA  Bacteria  decreased coverage  0.00484593  n/a   
 
 
-
 
NC_007298  Daro_3097  methyl-accepting chemotaxis sensory transducer  33.46 
 
 
602 aa  100  3e-20  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013201  Hmuk_3378  methyl-accepting chemotaxis sensory transducer  30.36 
 
 
517 aa  100  5e-20  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_007519  Dde_1650  methyl-accepting chemotaxis sensory transducer  32.71 
 
 
812 aa  100  6e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  40.88 
 
 
739 aa  100  6e-20  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_008463  PA14_28050  putative chemotaxis transducer  39.18 
 
 
531 aa  100  6e-20  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.652078  normal 
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  33.61 
 
 
541 aa  99.8  7e-20  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  40.88 
 
 
647 aa  99.8  9e-20  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  33.33 
 
 
626 aa  99.4  9e-20  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_011663  Sbal223_3274  methyl-accepting chemotaxis sensory transducer  36.99 
 
 
541 aa  99.4  9e-20  Shewanella baltica OS223  Bacteria  normal  0.0175031  normal  0.083895 
 
 
-
 
NC_009997  Sbal195_1117  methyl-accepting chemotaxis sensory transducer  36.99 
 
 
541 aa  99.4  1e-19  Shewanella baltica OS195  Bacteria  normal  0.0100073  normal  0.0339889 
 
 
-
 
NC_003910  CPS_2050  methyl-accepting chemotaxis protein  40.85 
 
 
704 aa  99.4  1e-19  Colwellia psychrerythraea 34H  Bacteria  normal  0.459277  n/a   
 
 
-
 
NC_004347  SO_3282  methyl-accepting chemotaxis protein  35.55 
 
 
667 aa  99.4  1e-19  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_1084  methyl-accepting chemotaxis sensory transducer  36.99 
 
 
541 aa  99.4  1e-19  Shewanella baltica OS185  Bacteria  hitchhiker  0.000100295  n/a   
 
 
-
 
NC_008577  Shewana3_3173  methyl-accepting chemotaxis sensory transducer  36.99 
 
 
541 aa  99  1e-19  Shewanella sp. ANA-3  Bacteria  normal  0.0131988  normal 
 
 
-
 
NC_009439  Pmen_2444  methyl-accepting chemotaxis sensory transducer  35.53 
 
 
489 aa  99.4  1e-19  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00221824  normal 
 
 
-
 
NC_008321  Shewmr4_2995  methyl-accepting chemotaxis sensory transducer  36.78 
 
 
541 aa  99  1e-19  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00226615  normal  0.196783 
 
 
-
 
NC_008322  Shewmr7_3076  methyl-accepting chemotaxis sensory transducer  36.78 
 
 
541 aa  99  1e-19  Shewanella sp. MR-7  Bacteria  unclonable  0.0000214454  normal  0.805143 
 
 
-
 
NC_010814  Glov_2776  methyl-accepting chemotaxis sensory transducer  42.07 
 
 
544 aa  98.2  2e-19  Geobacter lovleyi SZ  Bacteria  normal  0.839191  n/a   
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  38.41 
 
 
714 aa  98.2  2e-19  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_009052  Sbal_1015  methyl-accepting chemotaxis sensory transducer  36.99 
 
 
541 aa  98.6  2e-19  Shewanella baltica OS155  Bacteria  unclonable  0.0000000434326  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  28.44 
 
 
712 aa  98.6  2e-19  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009616  Tmel_0749  methyl-accepting chemotaxis sensory transducer  27.39 
 
 
657 aa  98.2  2e-19  Thermosipho melanesiensis BI429  Bacteria  normal  0.388814  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  28.61 
 
 
712 aa  98.2  2e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_011899  Hore_20840  methyl-accepting chemotaxis sensory transducer  34.83 
 
 
673 aa  97.8  3e-19  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1438  methyl-accepting chemotaxis sensory transducer  32.11 
 
 
540 aa  97.8  3e-19  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  38.51 
 
 
541 aa  97.4  4e-19  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  33.77 
 
 
626 aa  97.4  4e-19  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1020  methyl-accepting chemotaxis sensory transducer  36.42 
 
 
541 aa  97.4  4e-19  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00762848  n/a   
 
 
-
 
NC_011769  DvMF_3073  methyl-accepting chemotaxis sensory transducer  42.13 
 
 
677 aa  97.4  4e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011883  Ddes_0945  methyl-accepting chemotaxis sensory transducer  35.24 
 
 
675 aa  97.1  4e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.870162  n/a   
 
 
-
 
NC_010506  Swoo_4186  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  29.17 
 
 
526 aa  97.1  5e-19  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3611  methyl-accepting chemotaxis sensory transducer  32.29 
 
 
540 aa  97.1  5e-19  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3323  methyl-accepting chemotaxis sensory transducer  30.45 
 
 
539 aa  97.1  5e-19  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3322  methyl-accepting chemotaxis sensory transducer  30.45 
 
 
539 aa  96.7  6e-19  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.910778 
 
 
-
 
NC_008609  Ppro_1221  methyl-accepting chemotaxis sensory transducer  33.47 
 
 
544 aa  96.7  6e-19  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000143655  n/a   
 
 
-
 
NC_004347  SO_3404  methyl-accepting chemotaxis protein  31.7 
 
 
522 aa  96.7  6e-19  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_0263  methyl-accepting chemotaxis protein  30.55 
 
 
498 aa  96.7  7e-19  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  34.22 
 
 
548 aa  96.7  7e-19  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_008599  CFF8240_1223  methyl-accepting chemotaxis protein  36.84 
 
 
381 aa  96.7  7e-19  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  47.15 
 
 
636 aa  96.3  8e-19  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  34.91 
 
 
545 aa  96.3  8e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  36.14 
 
 
541 aa  96.3  9e-19  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009439  Pmen_2174  methyl-accepting chemotaxis sensory transducer  36.09 
 
 
544 aa  96.3  9e-19  Pseudomonas mendocina ymp  Bacteria  normal  decreased coverage  0.00506259 
 
 
-
 
NC_009831  Ssed_2690  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  34.85 
 
 
524 aa  95.9  1e-18  Shewanella sediminis HAW-EB3  Bacteria  normal  0.487789  normal 
 
 
-
 
NC_002939  GSU2652  methyl-accepting chemotaxis protein  28.04 
 
 
392 aa  95.9  1e-18  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3813  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.29 
 
 
521 aa  95.5  1e-18  Pseudomonas putida W619  Bacteria  normal  0.629648  normal  0.0156802 
 
 
-
 
NC_013385  Adeg_1963  methyl-accepting chemotaxis sensory transducer  38.89 
 
 
539 aa  95.5  1e-18  Ammonifex degensii KC4  Bacteria  normal  0.805375  n/a   
 
 
-
 
NC_010320  Teth514_0410  methyl-accepting chemotaxis sensory transducer  32.79 
 
 
548 aa  95.9  1e-18  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0550  methyl-accepting chemotaxis sensory transducer  33.14 
 
 
660 aa  95.5  1e-18  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.00000171017  n/a   
 
 
-
 
NC_007492  Pfl01_2100  chemotaxis sensory transducer  38.75 
 
 
537 aa  95.5  1e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.517374  normal  0.435335 
 
 
-
 
NC_007492  Pfl01_5515  chemotaxis sensory transducer  40.38 
 
 
658 aa  95.9  1e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.501051  normal  0.584272 
 
 
-
 
NC_010483  TRQ2_0564  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.14 
 
 
660 aa  95.5  1e-18  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.0020921  n/a   
 
 
-
 
NC_008322  Shewmr7_1313  methyl-accepting chemotaxis sensory transducer  34.6 
 
 
667 aa  95.5  1e-18  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00146838  normal 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  31.6 
 
 
638 aa  94.7  2e-18  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009665  Shew185_1282  methyl-accepting chemotaxis sensory transducer  32.09 
 
 
522 aa  94.7  2e-18  Shewanella baltica OS185  Bacteria  normal  0.13527  n/a   
 
 
-
 
NC_011146  Gbem_2857  methyl-accepting chemotaxis sensory transducer  28.4 
 
 
392 aa  95.1  2e-18  Geobacter bemidjiensis Bem  Bacteria  normal  0.0205381  n/a   
 
 
-
 
NC_013522  Taci_0556  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.86 
 
 
690 aa  95.5  2e-18  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  44.63 
 
 
629 aa  95.1  2e-18  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_011658  BCAH187_A0687  methyl-accepting chemotaxis protein  33.88 
 
 
658 aa  94.7  2e-18  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  34.91 
 
 
626 aa  94.7  2e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_007492  Pfl01_4317  chemotaxis sensory transducer  38.32 
 
 
540 aa  95.1  2e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.153995 
 
 
-
 
NC_008321  Shewmr4_1243  methyl-accepting chemotaxis sensory transducer  34.6 
 
 
667 aa  95.5  2e-18  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
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