Gene Ddes_0945 details

Gene Information

• Locus tag: Ddes_0945
• ID: 7284625
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
• Kingdom: Bacteria
• Replicon accession: NC_011883
• Strand: +
• Start bp: 1100742
• End bp: 1102769
• Gene Length: 2028 bp
• Protein Length: 675 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643581745
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_002479530
• Protein GI: 220904218
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.870162
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCATAA CGCTCACGCA CAAGTATGTG GGTTCGCTAT TCGGCGCTCT GATTACCTGC 
TGTGGGGTAG TGTTGTTTGT TTCCATCTAT TTTATGAAGG TCCCCATTGA AGATGAGCTG 
GATAAGGGCA TCCGCCGCAT GCAGAATATC ATTCTGGAGG CCAACGAGGT CACCAGCAAG 
CGCTTTGCGC AAAGCGCCGC CCTTATTGCC AGCGACAGCA GCATGATACA GGCCATTGCG 
CACAAGGATC ATGCGCTGGC CCGAGAGTTG GGCGAAAAAA GCATGAAAAT GGCCGGGTCG 
GACTTCATGA CCATTACTGA TGAGTCCGGC AAGGTCATCG CCCGTGGTCA CTCCGATAAA 
TACGGCGACA GTGTGACCAA TCAGGAAACC GTGGTTATTG CCCTCAAGGG GCAGCCCGCA 
GCGGCTGTTG TGGCAGGCAC CATTGTGCCG TTCACAATCC GGGCCAGTCA GCCTGTGGTT 
TATGAGGGGC GGGTAGTGGG GTCCATTTCC ATCGGCACCT CTCTGGTCAC CCCTGCCTAT 
CTTGACTGGC TCAAGCAGCT TTCGGGAGTT AACGTCACCA TTTTCAAGGG CGATACCCGG 
GTGATGACCA CGATCGTGAA TGACGGGCAG CGGGCTGTGG GCACAAAGCT GCAATCGCCG 
GAAATTATCG ACGCCGTGCT GAAAAAGGGA GAGGTTTACT ACACCCACAA CACCATTCTT 
GGGGTAGACT ACAACTCTGC TTACTGGCCG GTCAAAGACG CTAATAACCA GATCATCGGC 
ATGTGGTTTG TGGGCATGCC CATGAGCGAC CTGCAAAAGC TTGAGCACGA AGCAGTGGAC 
AAGGCCATTC TGGTGGCCTG TGGCCTGCTT GTGGTGCAGC TTACCCTGTC GGTGATTCTG 
GGGTTGCGTG TCAGCGCGCC GGTGGGCAAG ATCACCCGCT ACGCCCTTGG CGTGGCCGAA 
GGCAAGAAAG ACCTCACCCT TGATGTTTAC AGCAAGGACG ATATGGGCCA ACTGGCCAAT 
GCCTTGCGCC ATATGGAAGA AAACCTGCGC CGCCTGGTTC AGGATGCAAG CGAAAAGGCC 
GAACAGGCAC GCCTGATGGG CGAAGAAGCG CAGCAGGCTA TGGAAGAGGC CAAGCAGGCC 
CAGGCCCAGG CTGAAATTGC CAGGCGTGAA GGCATGATAA GCGCTGCGGG CCAGATAGAG 
GGCGTGGTTG AACGCCTTAA TGCTTCCATA AACGACATTG CTGAACAGGT GGACAATACC 
GGCGGCGCGT TGAGCCACGC CGTGGCCAGG CTGGCGGAAA CCGCGACAGC TATGGAAGAA 
ATGAATTCCA CCGTGCTTGA GGTTGCCAAA AATGCCGGCG GCGCTGCGGA TGTTTCGGCC 
TCGGCCAAGC TCAAGGCCCA GGCAGGCTCC GAAGTGGTAT ACAAGGCCGT GGACGGCATA 
CAGGAAGTGC AGCGCCAGTC CCTGGCTCTC AAGGATGGCA TGACCCAGCT TGACGAGCAT 
GCCAGGGCCA TTAACCAGAT CATGAGCGTC ATTTCCGACA TTGCCGACCA GACCAACCTG 
CTGGCGCTTA ACGCGGCCAT TGAAGCGGCC CGTGCGGGTG ACGCCGGCAG GGGATTTGCC 
GTTGTGGCCG ACGAGGTACG CAAGCTGGCA GAAAAAACCA TGGCTTCAAC CACAGATGTG 
GGCAATGCCA TTCGCGCCAT CCAGCAAAGC GCCTCGCAGA GCATTCAGGA AGTGGAGCTG 
GCCGTGCACA ACATCGCCTC CGCCACAGAC TTTTCCAACA AGTCCGGCGA AGCGTTGCAG 
GAAATCGTGG GCATGGTGGA TCAGACCGCG GACGAAGTGC GCGCCATTGC CACCGCCAGC 
GAGCAGCAGT CCGCTACCAG CGAAGAGATC AACAGGTCCA TCGCTGATGT GAACCACATT 
GCCGCCACAA CCTCTGAATC CATGCAGCTG GCCATGACCG AGCTTGAAGC CCTGCGCAAG 
CAGGCCCACA GCCTGGTAGA ACTGATTGAA CACATGAAAA AAGCCTAA 

 

Protein sequence

MRITLTHKYV GSLFGALITC CGVVLFVSIY FMKVPIEDEL DKGIRRMQNI ILEANEVTSK 
RFAQSAALIA SDSSMIQAIA HKDHALAREL GEKSMKMAGS DFMTITDESG KVIARGHSDK 
YGDSVTNQET VVIALKGQPA AAVVAGTIVP FTIRASQPVV YEGRVVGSIS IGTSLVTPAY 
LDWLKQLSGV NVTIFKGDTR VMTTIVNDGQ RAVGTKLQSP EIIDAVLKKG EVYYTHNTIL 
GVDYNSAYWP VKDANNQIIG MWFVGMPMSD LQKLEHEAVD KAILVACGLL VVQLTLSVIL 
GLRVSAPVGK ITRYALGVAE GKKDLTLDVY SKDDMGQLAN ALRHMEENLR RLVQDASEKA 
EQARLMGEEA QQAMEEAKQA QAQAEIARRE GMISAAGQIE GVVERLNASI NDIAEQVDNT 
GGALSHAVAR LAETATAMEE MNSTVLEVAK NAGGAADVSA SAKLKAQAGS EVVYKAVDGI 
QEVQRQSLAL KDGMTQLDEH ARAINQIMSV ISDIADQTNL LALNAAIEAA RAGDAGRGFA 
VVADEVRKLA EKTMASTTDV GNAIRAIQQS ASQSIQEVEL AVHNIASATD FSNKSGEALQ 
EIVGMVDQTA DEVRAIATAS EQQSATSEEI NRSIADVNHI AATTSESMQL AMTELEALRK 
QAHSLVELIE HMKKA