Gene Tpet_0550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0550 
Symbol 
ID5170729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp547798 
End bp549780 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content44% 
IMG OID640563057 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001244147 
Protein GI148269687 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000171017 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TACCTGTTTT CTGGAAAATC ATGATCATAG TACTGATACT TGGCGCAGGT 
ATAACGTTTG TTGGCACTTT AAGTACGATA ACGATTAGAA GCAAGCTATT GGAACAAACT
GATATAAACC TCCTGACACA GTCAGAAGGG AGTGCCGATG CACTGTGGAA CTTCTTACAG
GCACACACAC AACTTGTGGA TTTGCTTTCC CGCGATGAGG GTGTGATCAA TCTGTACAGG
GATGAAACCA ACGAAGAAGA TGTGAAAAGC TTGTTCGAGA AAGTTCTGAA GAGCTACCCA
AACGTTATGA ATGTCTATGT AGGTTTGAAA GATGGAAGGA TGTATTTGGT TCCAGAGCAA
GAACTTCCAG AAGGATACGA TCCAAGGGTG AGACCATGGT ACAAAGACGC AGTTGCTAAG
TTAGGTAAAA TCGTCATCAC CGATCCTTAC GCGGATGCTT CAACTGGAAA AACCATCATA
ACAATCGCAA AAGCGGTCCA GATCGGTCAG GAAATCGTAG GTGTTCTTGG CCTTGATTTT
GACTGTTCAA AACTGGTTGA TGAGCTCTTC AAAAAAGGTG TAGAAAAGGG ATATATGAGC
GCTCTTGTCG ATGAAAATGG TACTATCACT CTTCACAGCA AAAAGGATTA CATAGGCGAA
AACATAAAAG ACACGGATTT CTTTAAAAAG TGGCATGCAG GATCGGAAAG CGGCGTGTTT
GGATACGTGT TCGATGGTAT TCCAAGAAGA ACTGGGTACA AAAAACTACC GAACGGCTGG
ATATACGCTA TCGTGGTACC AGAAGAAATC GTTTACAGCG AAGTGAAAGA ATCCACGGTG
GTTCTTATAA CCATCACTCT TGTTTCTTTG GTTGCTGCAA TAGTCTTTGC GCTCTTCATG
TCGAGAAGAT ATATTTCGGA ACCGCTCAAA CACCTTGCAT CTATCTCAGA TAAGATTGCT
GGAGGTGATT TGACTGTCGA AATCCAGCTC AATTCAAAGG ATGAAATCGG AAAACTTGGA
AATGCTCTAA CACATATGGT TAAATCCCTC AGAGAAATAG CTTTAAACAT AAAGAACAAT
TCATCTGAAA TAAAACGAAA CGCAGAAAGT GTGGCTTCCG TAGCTCAGGA AGTCAGTTCA
ACTATCGAGG AAGTAACATC GCAGGTGGAA AATGTAGAAT CGAACGTGAG TAACACATCG
GCATCGATTC AGGAATTGAC GAGTGGGGTT GAGGAAGTAG CAGCGAGCGC TCAAAACGTT
TCCAGAGCAG CTCAGGATCT CTCAGAAAAA TCTACACAGG TCAGCGAATC AGCAAAAGAA
GGTGAGAAGG CCATCAAAGA AATAGTCGAG ATGATAAAAC AGGCAAGAAG CAGGGCAGAA
CAAACAGCAA GTGTTGTAGA GGAGTTGAAC GAACACGCAA GGAACATAGG ACAGATACTC
GATACGATCA ACTCGATAGC AGAGCAGACG AACCTTCTTG CCTTGAACGC GGCAATAGAG
GCGGCGAGAG CGGGAGAAGC GGGAAGAGGA TTCGCAGTTG TGGCGGATGA AATAAGAAAA
CTTGCAGAAG AGAGCAAGAG TGCGACGGAA AAAATAGGAC AGATATTGAA TCAGATCAGC
CAGGAAGTGG TGAAAGCGAA CGAAGAGACG AGAGGAACGG TGCAGGCAGT GGAGAACATA
AGCAGTAGAG CAGAAGTTGT AGCGAGCCAG TTTGACAGGA TAGCTCAGGG AATATCCAGC
ATAGTGTCGC AAATCCAGAA TCTCGCAGCA ATAGCTGAAG AGCAGAGCGC GGCGGCTGAA
GAAATGAGCA GCGCCATGGA CAACGCAAGC AGATCAATGG TAGAAGTAGC GGAGCAAATG
AACGAAATCG CAGAAGCGAT GAAACAACAG GCCAAGGCTG TCAATACACT GTCCGAAGCC
ATGAATAAAC TGGATCAGAT TGCAGAAAAA TTAGAAAAAG GGATGGAAGT ATTTAAATTG
TAA
 
Protein sequence
MKKLPVFWKI MIIVLILGAG ITFVGTLSTI TIRSKLLEQT DINLLTQSEG SADALWNFLQ 
AHTQLVDLLS RDEGVINLYR DETNEEDVKS LFEKVLKSYP NVMNVYVGLK DGRMYLVPEQ
ELPEGYDPRV RPWYKDAVAK LGKIVITDPY ADASTGKTII TIAKAVQIGQ EIVGVLGLDF
DCSKLVDELF KKGVEKGYMS ALVDENGTIT LHSKKDYIGE NIKDTDFFKK WHAGSESGVF
GYVFDGIPRR TGYKKLPNGW IYAIVVPEEI VYSEVKESTV VLITITLVSL VAAIVFALFM
SRRYISEPLK HLASISDKIA GGDLTVEIQL NSKDEIGKLG NALTHMVKSL REIALNIKNN
SSEIKRNAES VASVAQEVSS TIEEVTSQVE NVESNVSNTS ASIQELTSGV EEVAASAQNV
SRAAQDLSEK STQVSESAKE GEKAIKEIVE MIKQARSRAE QTASVVEELN EHARNIGQIL
DTINSIAEQT NLLALNAAIE AARAGEAGRG FAVVADEIRK LAEESKSATE KIGQILNQIS
QEVVKANEET RGTVQAVENI SSRAEVVASQ FDRIAQGISS IVSQIQNLAA IAEEQSAAAE
EMSSAMDNAS RSMVEVAEQM NEIAEAMKQQ AKAVNTLSEA MNKLDQIAEK LEKGMEVFKL