More than 300 homologs were found in PanDaTox collection
for query gene PXO_06142 on replicon NC_010717
Organism: Xanthomonas oryzae pv. oryzae PXO99A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010717  PXO_06142  chemotaxis protein  100 
 
 
366 aa  736    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0352354  n/a   
 
 
-
 
NC_010717  PXO_01024  chemotaxis protein  100 
 
 
366 aa  736    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0730182  n/a   
 
 
-
 
NC_011071  Smal_1917  methyl-accepting chemotaxis sensory transducer  84.43 
 
 
396 aa  630  1e-179  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.386674 
 
 
-
 
NC_007520  Tcr_0759  methyl-accepting chemotaxis sensory transducer  35.09 
 
 
406 aa  197  3e-49  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_2159  methyl-accepting chemotaxis sensory transducer  35.76 
 
 
414 aa  169  7e-41  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0155  methyl-accepting chemotaxis protein  35.36 
 
 
384 aa  157  3e-37  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0724  chemotaxis sensory transducer  30.46 
 
 
405 aa  152  8.999999999999999e-36  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.435605 
 
 
-
 
NC_009654  Mmwyl1_3295  methyl-accepting chemotaxis sensory transducer  31.6 
 
 
384 aa  142  8e-33  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3578  methyl-accepting chemotaxis sensory transducer  30.45 
 
 
331 aa  142  9.999999999999999e-33  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2222  methyl-accepting chemotaxis sensory transducer  30.59 
 
 
378 aa  139  6e-32  Shewanella sp. ANA-3  Bacteria  normal  0.894674  normal 
 
 
-
 
NC_009656  PSPA7_0260  putative chemotaxis transducer  33.44 
 
 
391 aa  139  7.999999999999999e-32  Pseudomonas aeruginosa PA7  Bacteria  normal  0.237341  n/a   
 
 
-
 
NC_008321  Shewmr4_2097  methyl-accepting chemotaxis sensory transducer  30.12 
 
 
378 aa  135  8e-31  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2117  methyl-accepting chemotaxis protein  31.67 
 
 
377 aa  135  9.999999999999999e-31  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_02270  putative chemotaxis transducer  32.49 
 
 
390 aa  135  9.999999999999999e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.319109  normal 
 
 
-
 
NC_008322  Shewmr7_1877  methyl-accepting chemotaxis sensory transducer  29.82 
 
 
378 aa  135  9.999999999999999e-31  Shewanella sp. MR-7  Bacteria  normal  0.410986  normal  0.95878 
 
 
-
 
NC_007912  Sde_3111  putative methyl-accepting chemotaxis sensory transducer  31.96 
 
 
397 aa  134  1.9999999999999998e-30  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2106  methyl-accepting chemotaxis sensory transducer  31.44 
 
 
380 aa  128  2.0000000000000002e-28  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2368  methyl-accepting chemotaxis sensory transducer  31.1 
 
 
380 aa  126  6e-28  Shewanella baltica OS195  Bacteria  normal  0.0668336  normal  0.991447 
 
 
-
 
NC_009665  Shew185_2251  methyl-accepting chemotaxis sensory transducer  31.1 
 
 
380 aa  126  6e-28  Shewanella baltica OS185  Bacteria  normal  0.0952292  n/a   
 
 
-
 
NC_011663  Sbal223_2094  methyl-accepting chemotaxis sensory transducer  31.1 
 
 
380 aa  126  6e-28  Shewanella baltica OS223  Bacteria  normal  0.465964  normal 
 
 
-
 
NC_011138  MADE_00410  methyl-accepting chemotaxis protein  30.12 
 
 
394 aa  122  8e-27  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3125  chemotaxis sensory transducer  30.9 
 
 
407 aa  117  5e-25  Dechloromonas aromatica RCB  Bacteria  normal  0.443773  normal 
 
 
-
 
NC_009486  Tpet_1365  methyl-accepting chemotaxis sensory transducer  34.65 
 
 
566 aa  106  6e-22  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1321  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
566 aa  105  1e-21  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00082247  n/a   
 
 
-
 
NC_008577  Shewana3_1150  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.36 
 
 
522 aa  101  2e-20  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  38.86 
 
 
647 aa  100  3e-20  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  34.98 
 
 
626 aa  100  3e-20  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  38.86 
 
 
739 aa  100  3e-20  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_009486  Tpet_0550  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
660 aa  100  5e-20  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.00000171017  n/a   
 
 
-
 
NC_007492  Pfl01_5515  chemotaxis sensory transducer  36.82 
 
 
658 aa  100  5e-20  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.501051  normal  0.584272 
 
 
-
 
NC_010483  TRQ2_0564  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.5 
 
 
660 aa  100  5e-20  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.0020921  n/a   
 
 
-
 
NC_008321  Shewmr4_1149  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.36 
 
 
522 aa  100  6e-20  Shewanella sp. MR-4  Bacteria  normal  0.737349  normal 
 
 
-
 
NC_008322  Shewmr7_1220  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.36 
 
 
522 aa  99.8  6e-20  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_3282  methyl-accepting chemotaxis protein  35.71 
 
 
667 aa  99.4  9e-20  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  33.64 
 
 
633 aa  98.6  1e-19  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  33.58 
 
 
544 aa  98.6  1e-19  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  38.29 
 
 
647 aa  98.2  2e-19  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2776  methyl-accepting chemotaxis sensory transducer  40.37 
 
 
544 aa  97.8  2e-19  Geobacter lovleyi SZ  Bacteria  normal  0.839191  n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  33.64 
 
 
619 aa  97.8  2e-19  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_008609  Ppro_3147  methyl-accepting chemotaxis sensory transducer  34.11 
 
 
540 aa  98.2  2e-19  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0302394  n/a   
 
 
-
 
NC_009438  Sputcn32_2054  methyl-accepting chemotaxis sensory transducer  32.48 
 
 
539 aa  98.2  2e-19  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4317  chemotaxis sensory transducer  35.75 
 
 
540 aa  98.2  2e-19  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.153995 
 
 
-
 
NC_007519  Dde_1650  methyl-accepting chemotaxis sensory transducer  36.41 
 
 
812 aa  98.6  2e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2411  methyl-accepting chemotaxis sensory transducer  31.28 
 
 
807 aa  98.2  2e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00900461  n/a   
 
 
-
 
NC_009092  Shew_2952  methyl-accepting chemotaxis sensory transducer  33.16 
 
 
541 aa  97.8  2e-19  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000751538  normal 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  35.18 
 
 
638 aa  97.4  3e-19  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_013385  Adeg_1963  methyl-accepting chemotaxis sensory transducer  36.73 
 
 
539 aa  97.8  3e-19  Ammonifex degensii KC4  Bacteria  normal  0.805375  n/a   
 
 
-
 
NC_008463  PA14_28050  putative chemotaxis transducer  40.48 
 
 
531 aa  97.8  3e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.652078  normal 
 
 
-
 
NC_009439  Pmen_2174  methyl-accepting chemotaxis sensory transducer  37.75 
 
 
544 aa  97.1  4e-19  Pseudomonas mendocina ymp  Bacteria  normal  decreased coverage  0.00506259 
 
 
-
 
NC_009654  Mmwyl1_3323  methyl-accepting chemotaxis sensory transducer  30.45 
 
 
539 aa  96.7  5e-19  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3322  methyl-accepting chemotaxis sensory transducer  30.45 
 
 
539 aa  96.7  5e-19  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.910778 
 
 
-
 
NC_011883  Ddes_0945  methyl-accepting chemotaxis sensory transducer  35.68 
 
 
675 aa  96.7  5e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.870162  n/a   
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  34.08 
 
 
626 aa  96.7  6e-19  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0250  methyl-accepting chemotaxis protein  30 
 
 
518 aa  96.7  6e-19  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  32.51 
 
 
546 aa  96.3  8e-19  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3219  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.42 
 
 
516 aa  96.3  8e-19  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.1353  n/a   
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  27.53 
 
 
541 aa  95.5  1e-18  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_003910  CPS_2050  methyl-accepting chemotaxis protein  39.44 
 
 
704 aa  95.9  1e-18  Colwellia psychrerythraea 34H  Bacteria  normal  0.459277  n/a   
 
 
-
 
NC_008751  Dvul_1280  methyl-accepting chemotaxis sensory transducer  35.4 
 
 
800 aa  95.1  1e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_3404  methyl-accepting chemotaxis protein  34.93 
 
 
522 aa  95.5  1e-18  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  37.71 
 
 
712 aa  95.9  1e-18  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_007492  Pfl01_2100  chemotaxis sensory transducer  42.15 
 
 
537 aa  95.5  1e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.517374  normal  0.435335 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  37.36 
 
 
638 aa  95.9  1e-18  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003886  methyl-accepting chemotaxis protein  27.59 
 
 
542 aa  95.1  2e-18  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1020  methyl-accepting chemotaxis sensory transducer  36.47 
 
 
541 aa  95.1  2e-18  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00762848  n/a   
 
 
-
 
NC_011663  Sbal223_3073  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.68 
 
 
522 aa  95.1  2e-18  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000000000166485 
 
 
-
 
NC_009439  Pmen_2444  methyl-accepting chemotaxis sensory transducer  42.58 
 
 
489 aa  94.7  2e-18  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00221824  normal 
 
 
-
 
NC_011883  Ddes_0349  methyl-accepting chemotaxis sensory transducer  40.14 
 
 
585 aa  94.7  2e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3173  methyl-accepting chemotaxis sensory transducer  36.47 
 
 
541 aa  95.1  2e-18  Shewanella sp. ANA-3  Bacteria  normal  0.0131988  normal 
 
 
-
 
NC_008751  Dvul_2315  methyl-accepting chemotaxis sensory transducer  33.83 
 
 
679 aa  95.1  2e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.0977353 
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  33.33 
 
 
626 aa  94.7  2e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_010320  Teth514_0410  methyl-accepting chemotaxis sensory transducer  30.12 
 
 
548 aa  94.7  2e-18  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  37.36 
 
 
541 aa  95.1  2e-18  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_009665  Shew185_1282  methyl-accepting chemotaxis sensory transducer  32.96 
 
 
522 aa  95.1  2e-18  Shewanella baltica OS185  Bacteria  normal  0.13527  n/a   
 
 
-
 
NC_008321  Shewmr4_2995  methyl-accepting chemotaxis sensory transducer  36.47 
 
 
541 aa  94.7  2e-18  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00226615  normal  0.196783 
 
 
-
 
NC_008322  Shewmr7_3076  methyl-accepting chemotaxis sensory transducer  36.47 
 
 
541 aa  94.7  2e-18  Shewanella sp. MR-7  Bacteria  unclonable  0.0000214454  normal  0.805143 
 
 
-
 
NC_003909  BCE_5181  methyl-accepting chemotaxis protein  31.94 
 
 
563 aa  94.4  3e-18  Bacillus cereus ATCC 10987  Bacteria  unclonable  0.0000000942928  n/a   
 
 
-
 
NC_008463  PA14_48030  putative methyl-accepting chemotaxis transducer  35.08 
 
 
541 aa  94.4  3e-18  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.478475 
 
 
-
 
NC_009831  Ssed_1006  methyl-accepting chemotaxis sensory transducer  34.95 
 
 
573 aa  94.4  3e-18  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  31.93 
 
 
541 aa  94.4  3e-18  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_007492  Pfl01_1630  chemotaxis sensory transducer  48 
 
 
541 aa  94.4  3e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0250136 
 
 
-
 
NC_012039  Cla_0105  MCP-domain signal transduction protein  39.13 
 
 
381 aa  94.4  3e-18  Campylobacter lari RM2100  Bacteria  hitchhiker  0.0000000000762426  n/a   
 
 
-
 
NC_007519  Dde_2585  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
552 aa  94  3e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3611  methyl-accepting chemotaxis sensory transducer  34.92 
 
 
540 aa  94.4  3e-18  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  33.47 
 
 
548 aa  94.4  3e-18  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.86 
 
 
626 aa  93.6  4e-18  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_3073  methyl-accepting chemotaxis sensory transducer  38.59 
 
 
677 aa  94  4e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_1279  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
728 aa  94  4e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  unclonable  0.000000558964  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  37.42 
 
 
638 aa  94  4e-18  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_002939  GSU0916  methyl-accepting chemotaxis protein  41.5 
 
 
394 aa  93.6  5e-18  Geobacter sulfurreducens PCA  Bacteria  decreased coverage  0.00484593  n/a   
 
 
-
 
NC_008609  Ppro_1221  methyl-accepting chemotaxis sensory transducer  27.8 
 
 
544 aa  93.6  5e-18  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000143655  n/a   
 
 
-
 
NC_011769  DvMF_0127  methyl-accepting chemotaxis sensory transducer  45.13 
 
 
771 aa  93.6  5e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.269314 
 
 
-
 
NC_007005  Psyr_1789  chemotaxis sensory transducer  37.06 
 
 
546 aa  93.6  5e-18  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.478165  decreased coverage  0.000703042 
 
 
-
 
NC_011769  DvMF_1372  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.8 
 
 
811 aa  93.6  5e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_2220  methyl-accepting chemotaxis sensory transducer  37.75 
 
 
669 aa  93.6  5e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  0.47632  normal  0.532523 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  32.32 
 
 
541 aa  93.6  5e-18  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_0686  methyl-accepting chemotaxis sensory transducer  40.79 
 
 
425 aa  93.6  5e-18  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4186  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.5 
 
 
526 aa  93.6  5e-18  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_0556  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.21 
 
 
690 aa  93.2  6e-18  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_1223  methyl-accepting chemotaxis protein  29.9 
 
 
381 aa  93.2  6e-18  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
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