| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0127 |
|---|
| Symbol | |
|---|
| ID | 7172002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 139865 |
|---|
| End bp | 142180 |
|---|
| Gene Length | 2316 bp |
|---|
| Protein Length | 771 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643538621 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002434556 |
|---|
| Protein GI | 218885235 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 0.269314 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCA AAAGCGTCGC ACCGGTATTC ATAATTTCCG TCATGCTGGC CGTCATCGCG
GTATTCGGCG GCATCATATA CTACGTGACG GGTTCCTCGT ACCGCATGGC GCTGGAACTG
GAACAGCACG CCATGGAACA GGCAGGCACC AGCGCGCGCG ATGCGCTTGC GTTGTACGTG
CAGAACTTTA CCGGCACCAT CAACCAGCTT GCCAAGCAGC GCCTGGTGCT GGAAGCCCTG
ACCGGCGACG CCGCCACCGC CCAGAACCGC CTGAAGGACG TGGTGCGCGG CGACGGCAAC
ATCTGGTCGG TCATCGTGTT CGACGACAAG GGCATCATCC GCGCGGGCAT CAACGCCGAC
ATGGAAGACC TGACCGGGGG CAAGCGCGGC GACCGCGACT ACTTCAAGGC GGTCATGGCC
GGGCAGGACA CCTTCATCGG CAAGTCCATC ATCACCGCCA AGACCGGCGG CGGCAACATG
TTCATCTTCG TGGCGGTGAA GGCCATCCGC GATGCCGGTG GCCGCGTCAT CGGCGGGGTG
GGCATCTTTC CGCGCTGGGA AAACTTCACC TCCACCTTCG TCAGCGGGCT GCACTTCGGC
CAGCGGGGCT ACGGCTTCAT GCTGGACGGC AGAGGCAACA TCATCGCCCA CCCCGACAGG
GACATGATGC TCAAGGACGT GACCGAGCAC GAATTCGTGC GTACCGCCCT GTCCATGAAG
AACGGCAACG CCTTCTACGA CTGGAAGGGC GAGCGCAAGT ACCTGACCGT CACCACGGAC
CCCGCCACCG GCTGGCTGGT GTGCATGAGC GCCTACACCG ACGAACTGGC CGGTACCGCC
GTTGCCCAAC GCAACACCCT GCTGGGCATC GGAGCGACGG CGCTGCTGGT GCTGGCGGGC
GTGGTGTCGC TGCTGGTGCG CCGTCTGGTG GCCCGCCCGG TGGCGGACAT AGAGGCATTC
ACCCGCGCCG TGGCCGGTGG CGACCTGAAG GCCGTCCTGC GCCAGGACTT CAAGTACGAA
TTCCGCAGCC TGGGCGACAA CGTGCGCACC ATGGTGGGCG AACTCAAGCA CAAGCTGGGC
TTTGCCCAGG GACTGCTGGA CGGCATCACC CTGCCCTGCG TGGTGGCCGG GCCCGACCAG
CGGGTGCTGT TCGTCAACCG GGCCACCCTC GACTACATGC AGATCGACGG CGACCCGCAA
GCCTTCATGG GGGTGCCGGT GGGGCGCATC TTCCACGGCG ACGACAACCA CACCACGGTC
ATCGGCACCT GCATGCGCGA ACGCAGCCCC CAGCGCGGCG TGCAGACGGA ACTGGCGGGC
CGCAAGGGCG CGCGGCTACA CGCCAGCGTG GACGCCGCCC CCATGTACGA CCTGGACGGC
ACGCTCATCG CCGGGTTTGC CCTGATTTCG GACCAGACGG ACATCAAGAC CCAGCACGCC
CGCATAGAGC GGCAGAACGA ACGCATCGCC CATGCCGCGG TAAGGGCCGA CGAAGTGGCC
AACATGCTGG CCTCGGCGTC CGAACAGCTG GCCGCGCAGA TCGAACAGTC GTCACGCGGC
AGCGACGAGC AGCGCAGCCG CACGGCAGAG GCTGCTGCCG CCGTGGAGGA AATGAACTCC
GCCTCCATGA GCGTTGCGCG CAACGCCGCT GAAACGGCGG ACCTGGCCGA TTCCGCCCGC
TCGCAGGCCC AGGAGGGCGC GCGGCTGGTG GAATCGGTGG TGAATACCAT CAACTCCATC
AACGGGCAGG CCGAAACCCT GAAGGCCGAC ATGACCGAAC TGGGCCGCCA GGCCGACGGC
ATCGGCCAGA TCATGACGGT CATCGCCGAC ATTGCCGACC AGACCAACCT GCTGGCGCTG
AACGCCGCCA TCGAGGCCGC CCGGGCCGGT GACGCCGGGC GCGGCTTTGC CGTGGTGGCC
GACGAGGTGC GCAAGCTGGC CGAAAAGACC ATGACCGCCA CCAGCGAGGT GGGCGGCTAC
ATCCGTTCGG TGCAGCAGAG CGCGCGGGCC AACATCCGGA GCACGGAAAA CACCACCGCC
GCCATCGTGG ACTGCACGCG CACCGCCAAC CTTTCCGGCG ATTCGCTGCG CAGCATCGTG
GGGCTGGTGG AGCGCACCTC GGACAACGTG CGCGCCATTG CCGCTGCCAG CGAACAGCAG
TCCGCCGCCA GCGAACAGGT GGGGCGCGGC ACGGAAGACA TCAACCGCAT CGCCTCGGAA
ACGGCGGAAG CCATGGGCCA GTCGTCGCAG GCCGTGACCG AACTGGCCCG GCTGGCCGTG
GAACTGAAGT CGATCATCGC GGAAATGCGG GAGTAA
|
|---|
| Protein sequence | MSVKSVAPVF IISVMLAVIA VFGGIIYYVT GSSYRMALEL EQHAMEQAGT SARDALALYV
QNFTGTINQL AKQRLVLEAL TGDAATAQNR LKDVVRGDGN IWSVIVFDDK GIIRAGINAD
MEDLTGGKRG DRDYFKAVMA GQDTFIGKSI ITAKTGGGNM FIFVAVKAIR DAGGRVIGGV
GIFPRWENFT STFVSGLHFG QRGYGFMLDG RGNIIAHPDR DMMLKDVTEH EFVRTALSMK
NGNAFYDWKG ERKYLTVTTD PATGWLVCMS AYTDELAGTA VAQRNTLLGI GATALLVLAG
VVSLLVRRLV ARPVADIEAF TRAVAGGDLK AVLRQDFKYE FRSLGDNVRT MVGELKHKLG
FAQGLLDGIT LPCVVAGPDQ RVLFVNRATL DYMQIDGDPQ AFMGVPVGRI FHGDDNHTTV
IGTCMRERSP QRGVQTELAG RKGARLHASV DAAPMYDLDG TLIAGFALIS DQTDIKTQHA
RIERQNERIA HAAVRADEVA NMLASASEQL AAQIEQSSRG SDEQRSRTAE AAAAVEEMNS
ASMSVARNAA ETADLADSAR SQAQEGARLV ESVVNTINSI NGQAETLKAD MTELGRQADG
IGQIMTVIAD IADQTNLLAL NAAIEAARAG DAGRGFAVVA DEVRKLAEKT MTATSEVGGY
IRSVQQSARA NIRSTENTTA AIVDCTRTAN LSGDSLRSIV GLVERTSDNV RAIAAASEQQ
SAASEQVGRG TEDINRIASE TAEAMGQSSQ AVTELARLAV ELKSIIAEMR E
|
|---|
| |