More than 300 homologs were found in PanDaTox collection
for query gene VC0395_0155 on replicon NC_009456
Organism: Vibrio cholerae O395



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009456  VC0395_0155  methyl-accepting chemotaxis protein  100 
 
 
384 aa  767    Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_2159  methyl-accepting chemotaxis sensory transducer  34.69 
 
 
414 aa  176  4e-43  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1917  methyl-accepting chemotaxis sensory transducer  35.64 
 
 
396 aa  160  5e-38  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.386674 
 
 
-
 
NC_010717  PXO_01024  chemotaxis protein  35.05 
 
 
366 aa  157  3e-37  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0730182  n/a   
 
 
-
 
NC_010717  PXO_06142  chemotaxis protein  35.05 
 
 
366 aa  157  3e-37  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0352354  n/a   
 
 
-
 
NC_007520  Tcr_0759  methyl-accepting chemotaxis sensory transducer  30.31 
 
 
406 aa  151  2e-35  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3111  putative methyl-accepting chemotaxis sensory transducer  39.39 
 
 
397 aa  149  1.0000000000000001e-34  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3295  methyl-accepting chemotaxis sensory transducer  30.58 
 
 
384 aa  135  9.999999999999999e-31  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_2368  methyl-accepting chemotaxis sensory transducer  27.84 
 
 
380 aa  130  3e-29  Shewanella baltica OS195  Bacteria  normal  0.0668336  normal  0.991447 
 
 
-
 
NC_009052  Sbal_2106  methyl-accepting chemotaxis sensory transducer  27.58 
 
 
380 aa  130  3e-29  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2251  methyl-accepting chemotaxis sensory transducer  27.84 
 
 
380 aa  130  5.0000000000000004e-29  Shewanella baltica OS185  Bacteria  normal  0.0952292  n/a   
 
 
-
 
NC_011663  Sbal223_2094  methyl-accepting chemotaxis sensory transducer  27.84 
 
 
380 aa  130  5.0000000000000004e-29  Shewanella baltica OS223  Bacteria  normal  0.465964  normal 
 
 
-
 
NC_007298  Daro_0724  chemotaxis sensory transducer  31.25 
 
 
405 aa  128  2.0000000000000002e-28  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.435605 
 
 
-
 
NC_008463  PA14_02270  putative chemotaxis transducer  28.91 
 
 
390 aa  122  9.999999999999999e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.319109  normal 
 
 
-
 
NC_008321  Shewmr4_2097  methyl-accepting chemotaxis sensory transducer  29.47 
 
 
378 aa  121  3e-26  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1877  methyl-accepting chemotaxis sensory transducer  29.22 
 
 
378 aa  120  3e-26  Shewanella sp. MR-7  Bacteria  normal  0.410986  normal  0.95878 
 
 
-
 
NC_009656  PSPA7_0260  putative chemotaxis transducer  29.56 
 
 
391 aa  119  7.999999999999999e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  0.237341  n/a   
 
 
-
 
NC_008577  Shewana3_2222  methyl-accepting chemotaxis sensory transducer  28.89 
 
 
378 aa  119  9.999999999999999e-26  Shewanella sp. ANA-3  Bacteria  normal  0.894674  normal 
 
 
-
 
NC_011138  MADE_00410  methyl-accepting chemotaxis protein  29.36 
 
 
394 aa  117  3e-25  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3578  methyl-accepting chemotaxis sensory transducer  28.83 
 
 
331 aa  114  4.0000000000000004e-24  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2117  methyl-accepting chemotaxis protein  30.56 
 
 
377 aa  113  6e-24  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_3125  chemotaxis sensory transducer  25.69 
 
 
407 aa  110  3e-23  Dechloromonas aromatica RCB  Bacteria  normal  0.443773  normal 
 
 
-
 
NC_010814  Glov_0149  methyl-accepting chemotaxis sensory transducer  31.31 
 
 
533 aa  88.6  2e-16  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  33.78 
 
 
549 aa  87.8  3e-16  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_009783  VIBHAR_01518  hypothetical protein  35.93 
 
 
674 aa  87.8  3e-16  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008751  Dvul_0662  methyl-accepting chemotaxis sensory transducer  37.24 
 
 
626 aa  86.7  6e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  0.436733  normal 
 
 
-
 
NC_009831  Ssed_3827  methyl-accepting chemotaxis transducer  33.51 
 
 
695 aa  86.7  7e-16  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000221184 
 
 
-
 
NC_010003  Pmob_0696  methyl-accepting chemotaxis sensory transducer with Cache sensor  39.86 
 
 
659 aa  86.7  7e-16  Petrotoga mobilis SJ95  Bacteria  normal  0.738999  n/a   
 
 
-
 
NC_013202  Hmuk_1755  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.56 
 
 
634 aa  86.3  7e-16  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.0373336  normal  0.88588 
 
 
-
 
NC_013456  VEA_004004  methyl-accepting chemotaxis protein  35.33 
 
 
663 aa  86.3  8e-16  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4343  chemotaxis sensory transducer, Pas/Pac sensor  41.67 
 
 
439 aa  85.9  0.000000000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1363  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.18 
 
 
438 aa  85.9  0.000000000000001  Thauera sp. MZ1T  Bacteria  normal  0.4426  n/a   
 
 
-
 
NC_012039  Cla_0087  MCP-domain signal transduction protein  31.05 
 
 
600 aa  85.1  0.000000000000002  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1501  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.42 
 
 
681 aa  85.1  0.000000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_0821  methyl-accepting chemotaxis sensory transducer  39.47 
 
 
545 aa  85.1  0.000000000000002  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000877148  hitchhiker  0.00000558474 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  34.83 
 
 
632 aa  85.1  0.000000000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  34.83 
 
 
629 aa  85.5  0.000000000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_009674  Bcer98_0508  methyl-accepting chemotaxis sensory transducer  38.01 
 
 
573 aa  85.1  0.000000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.520997  n/a   
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  34.83 
 
 
632 aa  85.1  0.000000000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_008700  Sama_0552  putative methyl-accepting chemotaxis sensory transducer  40.46 
 
 
648 aa  85.1  0.000000000000002  Shewanella amazonensis SB2B  Bacteria  normal  0.283806  decreased coverage  0.00439756 
 
 
-
 
NC_002947  PP_2823  methyl-accepting chemotaxis transducer  34.38 
 
 
550 aa  84.3  0.000000000000003  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3044  methyl-accepting chemotaxis sensory transducer  51.72 
 
 
688 aa  84.3  0.000000000000003  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_0219  methyl-accepting chemotaxis sensory transducer  30.77 
 
 
484 aa  84.7  0.000000000000003  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0457  methyl-accepting chemotaxis sensory transducer  35.93 
 
 
356 aa  84.3  0.000000000000003  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0654  putative methyl-accepting chemotaxis sensory transducer  36.49 
 
 
438 aa  84.3  0.000000000000003  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2783  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.31 
 
 
439 aa  84  0.000000000000004  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3709  methyl-accepting chemotaxis sensory transducer  38.41 
 
 
707 aa  84  0.000000000000004  Marinomonas sp. MWYL1  Bacteria  normal  0.852924  normal  0.967698 
 
 
-
 
NC_011769  DvMF_1057  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.39 
 
 
634 aa  84  0.000000000000004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007298  Daro_1140  chemotaxis sensory transducer  29.28 
 
 
418 aa  83.6  0.000000000000005  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  34.27 
 
 
629 aa  84  0.000000000000005  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_008609  Ppro_0142  methyl-accepting chemotaxis sensory transducer  32.82 
 
 
540 aa  83.6  0.000000000000005  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0808523  n/a   
 
 
-
 
NC_008609  Ppro_3058  methyl-accepting chemotaxis sensory transducer  27.59 
 
 
518 aa  83.6  0.000000000000005  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  35.39 
 
 
629 aa  83.2  0.000000000000006  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_008751  Dvul_1197  methyl-accepting chemotaxis sensory transducer  31.35 
 
 
582 aa  82.8  0.000000000000008  Desulfovibrio vulgaris DP4  Bacteria  normal  0.118848  hitchhiker  0.00410847 
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  33.16 
 
 
629 aa  82.8  0.000000000000008  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_008609  Ppro_1391  methyl-accepting chemotaxis sensory transducer  25.15 
 
 
557 aa  83.2  0.000000000000008  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  35.71 
 
 
549 aa  82.8  0.000000000000009  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2348  methyl-accepting chemotaxis sensory transducer  46.24 
 
 
440 aa  82.8  0.000000000000009  Pseudomonas putida F1  Bacteria  normal  0.0401397  normal 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  34.27 
 
 
629 aa  82.8  0.000000000000009  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1940  methyl-accepting chemotaxis transducer  54.55 
 
 
716 aa  82.4  0.00000000000001  Pseudomonas putida KT2440  Bacteria  normal  unclonable  0.00000108039 
 
 
-
 
NC_002947  PP_3414  methyl-accepting chemotaxis transducer/sensory box protein  46.24 
 
 
439 aa  82.8  0.00000000000001  Pseudomonas putida KT2440  Bacteria  normal  normal  0.241866 
 
 
-
 
NC_011138  MADE_03238  chemotaxis sensory transducer  35.23 
 
 
429 aa  82.8  0.00000000000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4997  methyl-accepting chemotaxis sensory transducer  38.19 
 
 
620 aa  82  0.00000000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.245568 
 
 
-
 
NC_012918  GM21_0365  methyl-accepting chemotaxis sensory transducer  31.28 
 
 
700 aa  82.4  0.00000000000001  Geobacter sp. M21  Bacteria  n/a    normal  0.0784998 
 
 
-
 
NC_010322  PputGB1_2526  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  46.24 
 
 
439 aa  82.4  0.00000000000001  Pseudomonas putida GB-1  Bacteria  normal  0.255481  normal  0.0913013 
 
 
-
 
NC_009485  BBta_2149  hypothetical protein  25.63 
 
 
374 aa  82.4  0.00000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.393338  normal 
 
 
-
 
NC_010718  Nther_2447  methyl-accepting chemotaxis sensory transducer  30.33 
 
 
437 aa  82.4  0.00000000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0524  methyl-accepting chemotaxis sensory transducer  44.14 
 
 
539 aa  82.4  0.00000000000001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0322  methyl-accepting chemotaxis sensory transducer  27.71 
 
 
662 aa  82.8  0.00000000000001  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20840  methyl-accepting chemotaxis sensory transducer  29.95 
 
 
673 aa  82  0.00000000000001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1494  methyl-accepting chemotaxis sensory transducer  54.22 
 
 
548 aa  81.6  0.00000000000002  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3256  methyl-accepting chemotaxis protein  63.08 
 
 
558 aa  81.6  0.00000000000002  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0185  methyl-accepting chemotaxis protein  28 
 
 
770 aa  82  0.00000000000002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1396  methyl-accepting chemotaxis sensory transducer  54.22 
 
 
548 aa  81.6  0.00000000000002  Shewanella putrefaciens CN-32  Bacteria  normal  0.664947  n/a   
 
 
-
 
NC_009457  VC0395_A2016  methyl-accepting chemotaxis protein  47.83 
 
 
433 aa  81.6  0.00000000000002  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000104003  n/a   
 
 
-
 
NC_011898  Ccel_2888  methyl-accepting chemotaxis sensory transducer  31.55 
 
 
494 aa  81.6  0.00000000000002  Clostridium cellulolyticum H10  Bacteria  normal  0.0112427  n/a   
 
 
-
 
NC_011832  Mpal_1769  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.28 
 
 
1343 aa  81.6  0.00000000000002  Methanosphaerula palustris E1-9c  Archaea  normal  0.221131  normal 
 
 
-
 
NC_013223  Dret_1269  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40 
 
 
700 aa  81.6  0.00000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.484624  normal  0.151355 
 
 
-
 
NC_008321  Shewmr4_0968  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
362 aa  82  0.00000000000002  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1006  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
362 aa  82  0.00000000000002  Shewanella sp. MR-7  Bacteria  normal  normal  0.963071 
 
 
-
 
NC_011725  BCB4264_A3533  methyl-accepting chemotaxis protein  29.82 
 
 
660 aa  81.3  0.00000000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0365  putative methyl-accepting chemotaxis sensory transducer  36.81 
 
 
548 aa  81.6  0.00000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2365  methyl-accepting chemotaxis sensory transducer  40.44 
 
 
714 aa  81.6  0.00000000000002  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0383  methyl-accepting chemotaxis sensory transducer  31.84 
 
 
700 aa  81.3  0.00000000000003  Geobacter bemidjiensis Bem  Bacteria  normal  0.424843  n/a   
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  38.6 
 
 
533 aa  81.3  0.00000000000003  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3929  methyl-accepting chemotaxis protein  39.84 
 
 
505 aa  80.9  0.00000000000003  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  50.63 
 
 
626 aa  81.3  0.00000000000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_010501  PputW619_3813  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.91 
 
 
521 aa  81.3  0.00000000000003  Pseudomonas putida W619  Bacteria  normal  0.629648  normal  0.0156802 
 
 
-
 
NC_007498  Pcar_2967  methyl-accepting chemotaxis protein (MCP)  38.85 
 
 
695 aa  81.3  0.00000000000003  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000011738  n/a   
 
 
-
 
NC_011984  Avi_9076  methyl-accepting chemotaxis protein  30.45 
 
 
612 aa  80.9  0.00000000000003  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4403  methyl-accepting chemotaxis sensory transducer  39.57 
 
 
670 aa  80.9  0.00000000000003  Pseudomonas putida W619  Bacteria  normal  0.604884  normal 
 
 
-
 
NC_011772  BCG9842_B1699  methyl-accepting chemotaxis protein  34.52 
 
 
660 aa  81.3  0.00000000000003  Bacillus cereus G9842  Bacteria  normal  0.606414  hitchhiker  0.000000000000351139 
 
 
-
 
NC_012560  Avin_24370  methyl accepting chemotaxis sensory transducer  44.95 
 
 
575 aa  80.9  0.00000000000003  Azotobacter vinelandii DJ  Bacteria  normal  0.0252866  n/a   
 
 
-
 
NC_009253  Dred_1557  methyl-accepting chemotaxis sensory transducer  40.8 
 
 
530 aa  80.9  0.00000000000003  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  42.98 
 
 
544 aa  80.5  0.00000000000004  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  38.31 
 
 
714 aa  80.5  0.00000000000004  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  38.31 
 
 
714 aa  80.5  0.00000000000004  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2860  methyl-accepting chemotaxis sensory transducer  25.81 
 
 
555 aa  80.9  0.00000000000004  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.000127985 
 
 
-
 
NC_008700  Sama_0622  putative methyl-accepting chemotaxis sensory transducer  33.33 
 
 
539 aa  80.9  0.00000000000004  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.321986 
 
 
-
 
NC_008700  Sama_2502  putative methyl-accepting chemotaxis sensory transducer  32.59 
 
 
649 aa  80.9  0.00000000000004  Shewanella amazonensis SB2B  Bacteria  normal  0.988754  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>