| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0654 |
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| Symbol | |
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| ID | 4602907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 809748 |
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| End bp | 811064 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639779989 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_926532 |
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| Protein GI | 119773792 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAATC AAAAATTGAA GCAATCATTG GCCTCTTATC GGTCGGAAAT TCAACGATAT
CAGGCGCGGG CAGCCGCCGT CAGCGCGTCA ACGGCGATGA TAGAATTTTT GCCGGACGGC
ACTATTGTCA CCGCCAATGA CAATTTTTTG TCCCTTGTGG GATACCGACT CGAAGATATC
CAGGGAAAAC ATCACCGTAT TTTTTGTACT CCTGAGTATG CCAACAGCCA TGAATACAAA
GCATTTTGGC GAAGTTTGGC AGCGGGGGAA CACGCCAGTG GTCGCTTTTT ACGGCTTGGT
CGGGATGGCA AAAATCTGTG GCTTGGCGCC TCTTACAATC CCATTCGCAA TGAAGAAGGC
AAGGTGGTGA GCGTCTTGAA GCTGGCAGCG GATGTCACGG AAATTGTGGA AATCGAAAAC
GAACAGCAAA GCATGATAAA TGCAATCGAT CGTTCCATGG CGGTAATTGA ATTTACCACA
GACGGCGAGG TAATCCGGGC CAATGAAAAC TTTTTGGCCG TAACCGGATA TCGTCTGGAT
GAAATCAAGG GGAAACACCA CCGGCTTTTT TGTGCGCCAG AATATGCGGC CTCACAGGAA
TATAAGCACT TCTGGTCTCG CTTGAATCAG GGGGAGTTTT TTACCGGCCG TTTTCAGCGT
CAGGATAAAT TGGGACGGAC AATTTGGCTC AGCGCCACCT ATAACCCTGT GTATGACGCG
CGCGGTGAGC TGTATAAAAT TGTCAAGTTT GCCAACGACA TTACCGAGCG GGTGAATCAA
CAGCAGGCAG AGTCGGCCGC TGCCGTGCTG GCGTATGATA TTGCGCTGAC TACCGACGCC
AATGCGCGCA GCGGTGCCCA GGTGGTACAG TCCACCGTTG AGGTGGTGAG AGGCATTGCC
GAGGAAATTA ATCTTGCTGC CAGGGGCATT GAGGATGTGA GCAACCAGTC GGAGAAGATA
GGCAATATCG TGCAAACCAT TCGCAGTATT GCCGATCAGA CCAACCTGCT TGCCCTGAAC
GCGGCCATTG AGGCTGCACG GGCCGGGGAG CAGGGCCGCG GCTTTGCTGT CGTGGCCGAT
GAGGTTCGCA GCCTGGCGGC ACGAACCGCC AATGCCACAG TCGAAATCGT TGATGTGGTA
CGCCAAAATC AGGTCTTGTC CCAGGCAGCA GTGGCTAACA TGGAGCAGAG CAAACACAAG
GTTGAGCAGG GCGTTGCCCT TGCCGTGGAG GCCGGCGAAG CCATAGAACA AATCCGGGAG
GGGGCACAGC AGGTCGTGGC CGCAGTGCAG GAGTTTAAAT TACAGCTGGA TAAATAA
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| Protein sequence | MFNQKLKQSL ASYRSEIQRY QARAAAVSAS TAMIEFLPDG TIVTANDNFL SLVGYRLEDI
QGKHHRIFCT PEYANSHEYK AFWRSLAAGE HASGRFLRLG RDGKNLWLGA SYNPIRNEEG
KVVSVLKLAA DVTEIVEIEN EQQSMINAID RSMAVIEFTT DGEVIRANEN FLAVTGYRLD
EIKGKHHRLF CAPEYAASQE YKHFWSRLNQ GEFFTGRFQR QDKLGRTIWL SATYNPVYDA
RGELYKIVKF ANDITERVNQ QQAESAAAVL AYDIALTTDA NARSGAQVVQ STVEVVRGIA
EEINLAARGI EDVSNQSEKI GNIVQTIRSI ADQTNLLALN AAIEAARAGE QGRGFAVVAD
EVRSLAARTA NATVEIVDVV RQNQVLSQAA VANMEQSKHK VEQGVALAVE AGEAIEQIRE
GAQQVVAAVQ EFKLQLDK
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