Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3414 |
Symbol | |
ID | 1046248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3864322 |
End bp | 3865641 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637146830 |
Product | methyl-accepting chemotaxis transducer/sensory box protein |
Protein accession | NP_745552 |
Protein GI | 26990127 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.241866 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGATT TCCATCGCAA GTCTGATTTG GCAGAAATCC AGCGCACCCG CCAGGCGTTG GCCGATGCGC AAGCCAAACT GGCCGCTATC GGCCGTTCCA TGGCGATGAT CGAGTTCGCC CCTGACGGTA CTATTCTCGA CGCCAACGAG CGCTTCTGCC AGGCCATGGG CTACAGCGCC GACGAGCTGC GTGGCAAGCA CCACCGGCTG TTCTGTGAGC CGGACTATGC AAAAAGCGCC GAGTACCAGC AACTGTGGCG CGAGTTGGGG CAGGGCAAGG CTATCAGCGG TACGTTCGAG CGTATCGACA AGGCGGGGCG CGAGGTCTGG CTGGAAGCCA GCTACATGCC CGTGCTGGAC GAGCACCGGC AAGTCACCAG CGTAATCAAG GTGGCGTCGG ACATCACCCA GCGGGTGGTG CAGGAGCACG AGAGCGAAAG CCTGCTCAAG GCCATCAGCC GCTCCATGGC GGTGATCGAG TTCACCCCCC AAGGCCGGGT GATCAAGGCC AACCAGAATT TTCTCGACAC CATGGGCTAC CGCCTCGATG AAGTGGTTGG CCGCCACCAC GGGCTGTTTT GCCTGGCGCA TGAACGCGAA TCGGCCCAGT ACCGAGAGTT CTGGGCTTCG CTGAATCGTG GCGAATACCA CTCGCACCGC TTCGAACGCG TCAACAAGCA GGGCCAGACC GTTTTTCTGG AGGCCTCCTA CAACCCGATC TTCGACAGCA AGGGCCGCCT GTGCAAAGTG GTCAAGTTTG CCAGCGACAT CACCCATCAG GTCTGCACCC AGCAAAGCGC CGCCCATGCC GCCCATGCCA GCTCGGTGCA GACCGATGCC TGCGCGCGCA AGGGGACCGA AGTGGTGCAG CAGGCGGTGC AGGTAATCGA GCAGATTTCC CAGGAGCTTA ACGACGCTGC GCGCAGTATC GACGCGGTAA ACAGGCAGTC GGATGTGATC GGGCAGATTG TGCTGACCAT TCGGGGCATC GCCGACCAGA CCAACCTGTT GGCCCTTAAT GCAGCCATCG AGGCAGCGCG TGCCGGCGAG CACGGGCGCG GCTTTGCCGT GGTGGCCGAT GAGGTGCGCA ACCTGGCCGC GCGAACCAGC AAGGCCACCC TGGAAATCGT CGATGTGGTG CGGCAGAACC ACGACCTGTC GCTATTGGCA GTGGCCAGCA TGCAATCGAG CCTCAACCGC ACCGGTCACG GCGTGGCGCT GGCCAATGAG GCGGGGACGG TGATCATGGA AATCCAGCAA GGCTCACGGC ACGTCGTGGA TGCCATCAGC CAGATAACCT CGACGCTGCA ATTGCATTGA
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Protein sequence | MFDFHRKSDL AEIQRTRQAL ADAQAKLAAI GRSMAMIEFA PDGTILDANE RFCQAMGYSA DELRGKHHRL FCEPDYAKSA EYQQLWRELG QGKAISGTFE RIDKAGREVW LEASYMPVLD EHRQVTSVIK VASDITQRVV QEHESESLLK AISRSMAVIE FTPQGRVIKA NQNFLDTMGY RLDEVVGRHH GLFCLAHERE SAQYREFWAS LNRGEYHSHR FERVNKQGQT VFLEASYNPI FDSKGRLCKV VKFASDITHQ VCTQQSAAHA AHASSVQTDA CARKGTEVVQ QAVQVIEQIS QELNDAARSI DAVNRQSDVI GQIVLTIRGI ADQTNLLALN AAIEAARAGE HGRGFAVVAD EVRNLAARTS KATLEIVDVV RQNHDLSLLA VASMQSSLNR TGHGVALANE AGTVIMEIQQ GSRHVVDAIS QITSTLQLH
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