| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1269 |
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| Symbol | |
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| ID | 8419097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1488199 |
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| End bp | 1490301 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037844 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_003198135 |
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| Protein GI | 258405393 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.484624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.151355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGA AGGTCGGCGT TCAGGCCAAG CTCACACTGG GCTGCATAGC CGTGGTTCTG
GTCACTCTCC TGTGCACCAG TGCCATGAAT GGCTGGTATT CCAAAAAAGG ATATACAAAA
CAAGGCCATG AACTCCTGCA AGGGGTTTCG CGGACTTTGG TGGAGACCGT TCAGCTCAAA
CACGATCTGA CGGTCAAGGC CCTGGACTCG GAACTCAACG TCTTTGACCT CCAGTTCAAC
CTGAAAGGCT TCCCGGTTAT CAACCCCCTG TTTGAAAGCA AAATTGCCCT CCAAGGGAGG
GGCCAAGAAG GGGAGACGGT TGTTTTGCCA GGACTCAAAC TCGGCAACGC CTTTCTCAAC
GAGGACCACA CCCTGGTGGA CACGGTCCAG AAGACCGTCT CCGACGATGT CAGTGTCCTT
TTGCAAAAGG ACAAGCGGTT TGTCCGCATC TCAACCACAC TGCAGGACAA CGCCGAGAAG
CGGCGAATCG GCGGCTTCCT GGCCCCGGAC CATCCGGCGT CCCAGGCCCT GTCCTCAGGT
GAACCATATA CCGGCAAAAT CCGCATCAAC GGCAGGGCCT TCCTTGCGGC CTATCAGCCA
CTGATGGATT TGCGCGGCGA ACAGGTGATC GGCGCCCTGG AGGTCGTGCG GCCCTTGCTC
ACCCCCCAAT TAGGGCAGAC TTTGCAACGC CTGAACGTCA ATGGAAAAGG GTATTCCCTG
GCCGTGGGCC CCTCCGGAAA AATCCTCCTG CATCCCGAGA GCGATCGCCA GGGGCAGCAA
TGGGACCAGA CCGCTTTGGA GCGGAGCTCC CAAAAGAGCC AAAACGTCCA CACGTATACC
AGACGAGGCG ACCAGCGACT GGCGGTCGTC AATTATTTTG CGCCCTGGGA GACGTATCTG
GTGACCACCG TGGCACGATC CGCACTGAGT CAGGGCATCA ATGAACGTGT ACTCGCCGCC
GCAGGCTGGA GCGCCGCTCC CTCTTTGGCC TTGGCCCTGA TTGTCATCGG TCTGGTCAGC
CGCCAGATCA TGCGTCCCAT CAAGCGCTTG GCCGAGGAAT CCGAACGAGT GGCCAGCGGG
GAGTCCGATT TCGCTTTTGA GCACGGCGTC AATGACGTCA TCGGTCAAAC CTCCCGGGCT
CTGGACAGCG TTCTGCAGCA ACTCAACAAC CGCATGGCCT TTGCCCAATC TCTGCTGGAC
GGTATCTGCA TGCCCTATGT GGTGGTTGAC CGTGAGAACC GGATTACGGC CGTGAACGGC
GCGGCCCTGG AAATTCTGGG CCGCGATGGG GCTCCCGAAG AGTATCACGG ATGGCAGGTC
GAGGAATTTG TCGACTGGCG GCAGGCGGAG TGGTTCATGA CCCGGGAAGT GCTGGAAACG
GAAGCATTCA CCGAAAGCGA GGTCCAGTTG CGCCATGCCC GGCACGGAAG TTCTGTGGAC
CTCCGGATTT CGGCCAATCC CATCTACGAC GCTGAAAATT CGCTCATCGG GGCCTTTGCC
CTGTGGGTGG ACATGAGTTC CGAGCGGGCC CAGCAGCGAC GGATTACCGA ATTGGCTCAA
AGCACCCGCG ACCAAGCCGA GAGCGGCGAT GCAGTCGTCC AACAATCCAT TGGCGTCATG
CACGAGGTCC ACGACCACGC CACCCGGTTA CAAAACGACA TGGGCGAACT CGAAGAAACG
ATCAATTCCA TCAGCGGGGT GATCCATCTG ATCTCCGGGG TAGCCAATCA GACGAACCTC
CTGGCTCTGA ACGCGGCCGT GGAGGCGGCC AGGGCAGGTG AGGCCGGCCG CGGTTTTGCC
GTCGTGGCCC AGGAGGTTCG CAATCTCGCG GTACAAACCC AGCAGGCCAC CAAGGATGTC
GAGGCCCAGA TCTCGGCCAT CGAAGCCCAA TCCAAGGCCA CTGTCCAAGC CACAGCAAAG
GCGGCCACAG CCGCGTCCCA GGCCAACGAG CTGGCCTCGC AGGCTGGGGA GGTGATGCAG
AAGCTGGTCG CCGCGGTTCA GGAATCGGCC CAGGAAGTCC AATTTTCAAT CCCGCAAGGG
GAACACAAGG CAGGATATTG GGGCCAAAGT CTCGCTGCCC GGACCAATAC ATTGGTGCAG
TGA
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| Protein sequence | MLKKVGVQAK LTLGCIAVVL VTLLCTSAMN GWYSKKGYTK QGHELLQGVS RTLVETVQLK
HDLTVKALDS ELNVFDLQFN LKGFPVINPL FESKIALQGR GQEGETVVLP GLKLGNAFLN
EDHTLVDTVQ KTVSDDVSVL LQKDKRFVRI STTLQDNAEK RRIGGFLAPD HPASQALSSG
EPYTGKIRIN GRAFLAAYQP LMDLRGEQVI GALEVVRPLL TPQLGQTLQR LNVNGKGYSL
AVGPSGKILL HPESDRQGQQ WDQTALERSS QKSQNVHTYT RRGDQRLAVV NYFAPWETYL
VTTVARSALS QGINERVLAA AGWSAAPSLA LALIVIGLVS RQIMRPIKRL AEESERVASG
ESDFAFEHGV NDVIGQTSRA LDSVLQQLNN RMAFAQSLLD GICMPYVVVD RENRITAVNG
AALEILGRDG APEEYHGWQV EEFVDWRQAE WFMTREVLET EAFTESEVQL RHARHGSSVD
LRISANPIYD AENSLIGAFA LWVDMSSERA QQRRITELAQ STRDQAESGD AVVQQSIGVM
HEVHDHATRL QNDMGELEET INSISGVIHL ISGVANQTNL LALNAAVEAA RAGEAGRGFA
VVAQEVRNLA VQTQQATKDV EAQISAIEAQ SKATVQATAK AATAASQANE LASQAGEVMQ
KLVAAVQESA QEVQFSIPQG EHKAGYWGQS LAARTNTLVQ
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