Gene Shewmr7_1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1006 
Symbol 
ID4255692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1163486 
End bp1164574 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content49% 
IMG OID638121617 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_737062 
Protein GI114046512 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.963071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTTTC ATTCCAAACT CAAAGCAGAA AACGAAGCGC TGAAACAACG GCTGGTTGAT 
CAACAACACA GACACGAAGT TGAAATTGAA GAGTTAAAAA ACATGGCCCG AGAAAACGAG
GCCATGCAAC AGCAGTCCCG CCAGCATATT GATCTGTATA GCGAAGTCAT CGCCTGCCAA
AACCAAGGCG GCGAGATGTT AAATGCTGTC AGAGATGGCC TAGCTAGCAG CGCCGAATTA
CTCACCGAAG AACAGGCTGC GCTGTCTGAA TTAGATAAGA TTTTTGATCA AACACGGGTA
GCAATTGCCA ATTTAGGCAG CCGCGCGACT GACATCAACG AGCAAGCCAC CAACAGTATG
GATGCCGTAA CCGAACTGAA TAATACGACC TCATCGATTA ATCAGTTTGT CTCCGCCATT
CAAGGCATCT CAGAGCAAAC CAACCTACTC GCCCTCAATG CCGCCATCGA GGCCGCCCGC
GCTGGTGAAG CGGGCCGAGG CTTTGCCGTG GTCGCCGACG AAGTCAGGCA ATTAGCGAGC
AAGGCCCACG AGGCCAGTAG CCAAATTGAA AAACTGGTAA AGCAGATTGT GGCACAGGCG
TCGAATATCA AAGAAATTGT GCATAACAAT CAAAACAGTG CCCTCGATGT CGCCTCTTCT
TCGACTCAAA TCGGCCAAGT GGTTGAAGAT GTACTTCAAC GCTCTCACAA AATGCAGCAG
GTGATCCACA ATGCGGCGAC CGCATCTTTT TTAAATACCA CTAAACTCGA CCACGCGGTA
TGGAAGAGCC ATGTGTATCA ATTAATTGAG AAGAATCAAC ATAACCACAG TGTGAACTCC
CATACAGAGT GCCGCTTGGG TCAATGGTAT TTCAAAGGAT TTGGCGCGGA AAATTATCAG
CATTTAAGCA ACTTTAAAGC CCTCGATGCT CCCCATAAGG CTGTGCACGA TGCGGGTAAA
GCGGCGCTGG CTGCAAAACA GAAAGGCAAC TTAGCAGACA TGGTAAAGCA GTTACATGCT
ATGGAAGACT CGAGTATGCG GGTTGTGGCT TGCCTCGATA ATCTACTGCG AGATGTGTAT
CGCCAGTAA
 
Protein sequence
MWFHSKLKAE NEALKQRLVD QQHRHEVEIE ELKNMARENE AMQQQSRQHI DLYSEVIACQ 
NQGGEMLNAV RDGLASSAEL LTEEQAALSE LDKIFDQTRV AIANLGSRAT DINEQATNSM
DAVTELNNTT SSINQFVSAI QGISEQTNLL ALNAAIEAAR AGEAGRGFAV VADEVRQLAS
KAHEASSQIE KLVKQIVAQA SNIKEIVHNN QNSALDVASS STQIGQVVED VLQRSHKMQQ
VIHNAATASF LNTTKLDHAV WKSHVYQLIE KNQHNHSVNS HTECRLGQWY FKGFGAENYQ
HLSNFKALDA PHKAVHDAGK AALAAKQKGN LADMVKQLHA MEDSSMRVVA CLDNLLRDVY
RQ