Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1006 |
Symbol | |
ID | 4255692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1163486 |
End bp | 1164574 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638121617 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_737062 |
Protein GI | 114046512 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.963071 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGGTTTC ATTCCAAACT CAAAGCAGAA AACGAAGCGC TGAAACAACG GCTGGTTGAT CAACAACACA GACACGAAGT TGAAATTGAA GAGTTAAAAA ACATGGCCCG AGAAAACGAG GCCATGCAAC AGCAGTCCCG CCAGCATATT GATCTGTATA GCGAAGTCAT CGCCTGCCAA AACCAAGGCG GCGAGATGTT AAATGCTGTC AGAGATGGCC TAGCTAGCAG CGCCGAATTA CTCACCGAAG AACAGGCTGC GCTGTCTGAA TTAGATAAGA TTTTTGATCA AACACGGGTA GCAATTGCCA ATTTAGGCAG CCGCGCGACT GACATCAACG AGCAAGCCAC CAACAGTATG GATGCCGTAA CCGAACTGAA TAATACGACC TCATCGATTA ATCAGTTTGT CTCCGCCATT CAAGGCATCT CAGAGCAAAC CAACCTACTC GCCCTCAATG CCGCCATCGA GGCCGCCCGC GCTGGTGAAG CGGGCCGAGG CTTTGCCGTG GTCGCCGACG AAGTCAGGCA ATTAGCGAGC AAGGCCCACG AGGCCAGTAG CCAAATTGAA AAACTGGTAA AGCAGATTGT GGCACAGGCG TCGAATATCA AAGAAATTGT GCATAACAAT CAAAACAGTG CCCTCGATGT CGCCTCTTCT TCGACTCAAA TCGGCCAAGT GGTTGAAGAT GTACTTCAAC GCTCTCACAA AATGCAGCAG GTGATCCACA ATGCGGCGAC CGCATCTTTT TTAAATACCA CTAAACTCGA CCACGCGGTA TGGAAGAGCC ATGTGTATCA ATTAATTGAG AAGAATCAAC ATAACCACAG TGTGAACTCC CATACAGAGT GCCGCTTGGG TCAATGGTAT TTCAAAGGAT TTGGCGCGGA AAATTATCAG CATTTAAGCA ACTTTAAAGC CCTCGATGCT CCCCATAAGG CTGTGCACGA TGCGGGTAAA GCGGCGCTGG CTGCAAAACA GAAAGGCAAC TTAGCAGACA TGGTAAAGCA GTTACATGCT ATGGAAGACT CGAGTATGCG GGTTGTGGCT TGCCTCGATA ATCTACTGCG AGATGTGTAT CGCCAGTAA
|
Protein sequence | MWFHSKLKAE NEALKQRLVD QQHRHEVEIE ELKNMARENE AMQQQSRQHI DLYSEVIACQ NQGGEMLNAV RDGLASSAEL LTEEQAALSE LDKIFDQTRV AIANLGSRAT DINEQATNSM DAVTELNNTT SSINQFVSAI QGISEQTNLL ALNAAIEAAR AGEAGRGFAV VADEVRQLAS KAHEASSQIE KLVKQIVAQA SNIKEIVHNN QNSALDVASS STQIGQVVED VLQRSHKMQQ VIHNAATASF LNTTKLDHAV WKSHVYQLIE KNQHNHSVNS HTECRLGQWY FKGFGAENYQ HLSNFKALDA PHKAVHDAGK AALAAKQKGN LADMVKQLHA MEDSSMRVVA CLDNLLRDVY RQ
|
| |