| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2251 |
|---|
| Symbol | |
|---|
| ID | 5371462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 2679186 |
|---|
| End bp | 2680328 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640830465 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001366452 |
|---|
| Protein GI | 153000771 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0952292 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATACA AGGATGGGGT CGTTGCGTTG CTCGCGGCAG GCGTTGGATA TTTGCTGAGT
TTAATCACCT TGTGGGCGAT GGGGCCGATT ATTTCTGTGT TGATTATGTT GCTGTGGCAA
TTTTATCAGC ACAAGCAAAT GCAGTCAGTT CAACAGCATG ATGATAAGTC TTCAAACACC
CAACTTGCCG CCGATTGGCA AGCTCACGTC AGTCTGTATC AAGAAACGAT CACCACACTC
AACAGTTGTG GATCTAACAT TGACAGCGTA CTTGCGGTGC AGGGCGATGC GGTCAATCTG
CTGGGAGAGT CGTTTGATGG CTTAGGACGA TTAATGACCG AGCAAACAGG GTTCATTTCA
GCTCTTGTTC AAAGCACTGA CGATGCTGAG TTATTCCATT CAGACCAAAT GAAACAATTT
GCCAATAATA CCTCAATGAC GTTAGAACGC TTCATTCAAT CCACTATAGA AATGTCGGCA
TCGACCATGG AGTTATTGGA GAAAGTGAAC CTCATCTATG AGTCTATGCC CCAAGCTATG
AAAGCCTTAC AGGATATAGA TCAGATCTCT TCCCAGACCA ATTTACTCGC CTTAAATGCG
GCAATTGAAG CGGCGCGGGC GGGTGATGCG GGCAGGGGAT TTGCGGTTGT GGCCGATGAG
GTGCGGGCTT TATCCACTCG CAGTGCAGGC TTTAGTGAAG GCATTCAAAA ACAGCTTAGA
TCGATTCAAA CTCAGATTGA GCAATTAACC GTACACGTGA GTAAAGTTGC TGCGCAAGAT
ATGACTTATA TCATTGATGC AAAGAAGGAT ATTGATACTG CACTAAGGCA GATTATCGTT
AAAGCAGAGA AGGATTCTCA AGTGATCGAA CGCATAGATT CATCGGCACA TGAACTCGAA
CAGGCCATTT CAGATACGAT CCGTGGCTTG CAGTTCAGTG ATATCACCTC CCAAAGTCTG
ATTTATACCA ATCAATCCTT AAGCCATTTA AAAGAATCCC TCAATCGTGT TGCCACTATG
TCACAACAGG AGTTTGGCAT TCAAGGTGAT GACATTTCGA CACAAATGAG TCGCCGACGC
CAGGAGACGC ATAATCCCGT ATCGAGGGAT CAAATAACCT GTGGTGAAAT TGAACTCTTT
TAA
|
|---|
| Protein sequence | MTYKDGVVAL LAAGVGYLLS LITLWAMGPI ISVLIMLLWQ FYQHKQMQSV QQHDDKSSNT
QLAADWQAHV SLYQETITTL NSCGSNIDSV LAVQGDAVNL LGESFDGLGR LMTEQTGFIS
ALVQSTDDAE LFHSDQMKQF ANNTSMTLER FIQSTIEMSA STMELLEKVN LIYESMPQAM
KALQDIDQIS SQTNLLALNA AIEAARAGDA GRGFAVVADE VRALSTRSAG FSEGIQKQLR
SIQTQIEQLT VHVSKVAAQD MTYIIDAKKD IDTALRQIIV KAEKDSQVIE RIDSSAHELE
QAISDTIRGL QFSDITSQSL IYTNQSLSHL KESLNRVATM SQQEFGIQGD DISTQMSRRR
QETHNPVSRD QITCGEIELF
|
|---|
| |