Gene Shewmr4_2097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2097 
Symbol 
ID4252670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2498692 
End bp2499828 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content45% 
IMG OID638118721 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_734227 
Protein GI113970434 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATACA AGGATGGCAT TGTTGCAGTG TTTGCTGCAG TAATAGGATA TTTCATCGGC 
AGCTTAGTCA GCTTTGTACT GAGTCCCTTA ATTGCCGTGA TAATCATGCT TGCTTGGCAG
TTTTATCGAC AATCTTCAGC ATCTCAAACC GCCACTCACG CCTATGCTAC TCCAAGTGCC
CGCGCCGATT GGCAAGATCA GCTTAATCTC TATCAAGAAG TATCAGTCTC ATTAAAAACC
TGCGAGCAGA GTATCGACGA TGTGCTGTCG GTGCAGTCGG ATGCGGTCAA CCTATTGGGC
GGCGCCTTCG ATGGTCTTGG AAAGCTGATG AATGAGCAAA GCGAGTTTAT CTCAGCACTG
GTGCATAGCA ACGATGATGA AGAGATTTTC CATTCAGAGC AGATGAAGTT ATTTGCCAAT
AACACCTCGA CCACGTTGGA GCGTTTTATT CAATCGACCA TTGAAATGTC AGCCTCTAAT
ATCGATTTGC TCGAGAAAGT GAATGTGATT TATGAATCTA TGCCCCAAGC GATGAAGGCA
TTAAAGGATA TCGACCAAAT CTCTTCGCAA ACCAATTTAC TGGCCTTGAA CGCGGCAATT
GAGGCCGCCC GTGCAGGGGA TGCGGGTAGA GGCTTTGCTG TGGTGGCCGA TGAGGTGCGC
GCCTTGTCTA ACCGCAGCGC TGGTTTTAGC GAAAGTATTC AAAAACAATT ACATACAATT
CAAGTGCAAA TTGAACAGTT AACCCATCAA GTGAGTAAAG TGGCTGCTCA GGATATGTCT
TACATTATCG AGGCGAAAAA AGATCTCGAT ACGGCATTGA AACAAATTAT TGTTAAAGCA
GAAAAAGACG CTGTGGTTAT CGAACGGATC GACACTTCTG CACACGAATT AGAAAGCGCC
ATCGCCGATA CGATCCGTGG TTTACAATTT AGCGATATTA CCTCGCAAAG TTTGATTTAC
ACCAATCAGA GTCTGAAACA TTTGCGTGAA TCTATTAATC GAGTCACGGC AATGTCGCCT
GAAGAATTCG ATGAACATTG CGATGGCCTG GTTTCTCAGA TCAGTAGTCG GCGTACCAAC
ACTCATAATC CAGTATCCGC AAGTCAAATT AGTTGTGGTG AGATTGAGCT TTTCTAA
 
Protein sequence
MTYKDGIVAV FAAVIGYFIG SLVSFVLSPL IAVIIMLAWQ FYRQSSASQT ATHAYATPSA 
RADWQDQLNL YQEVSVSLKT CEQSIDDVLS VQSDAVNLLG GAFDGLGKLM NEQSEFISAL
VHSNDDEEIF HSEQMKLFAN NTSTTLERFI QSTIEMSASN IDLLEKVNVI YESMPQAMKA
LKDIDQISSQ TNLLALNAAI EAARAGDAGR GFAVVADEVR ALSNRSAGFS ESIQKQLHTI
QVQIEQLTHQ VSKVAAQDMS YIIEAKKDLD TALKQIIVKA EKDAVVIERI DTSAHELESA
IADTIRGLQF SDITSQSLIY TNQSLKHLRE SINRVTAMSP EEFDEHCDGL VSQISSRRTN
THNPVSASQI SCGEIELF