Gene Pfl01_2100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2100 
Symbol 
ID3715993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2385973 
End bp2387586 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content62% 
IMG OID 
Productchemotaxis sensory transducer 
Protein accessionYP_347832 
Protein GI77458327 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.517374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.435335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGATCA AACTGCGTTT GGTGTTGCTG ATTGCGACCA GCCTGCTGAC GGCGTTGATC 
GTGAGTCTGG TCAGTTACGT CGGCAATCAG CGGATGGCTT CGGCGGTCAG TGACAACGCG
GTCAGCATGA GCGCGCTGCG CAATCACATG GAAGCCGACA TGATGCATGA CGCCCTGCGT
GCCGATGTGT ATTCGGCAAT GCTGGTGGGG CTGAGCAAAA GCACCAGTTC GGCGGACGAG
GTGCGCAGCT CCGTCGAAGA GCATGCGGCG CATTTTCGCG AGGTATTGGG TGAAAATCTC
AAGTTGCCGG TGAATCCGAC GATCAAGTCC GCGCTGGAGC AGATCAAGCC CAGCCTCGAC
ACCTACATCA GCGCCGGGGA GCAGATCGTC GGTCTTGCAC TGGAAAACCC GGAAAGCGCC
CAGCAGCATC TCGGCACCTT CAGTACGGCG TTCAGCCAGC TCGAAGAACA GATGGCTGCC
CTCAGCGAGC TGATCGAAAC CAATACCCGG CAGACCAGCG AAGGCACCGA AGCGGCGATC
CACAATGCCA ATGTCGCGCT CGGTATCGTC CTCTTTGCCA GCCTGTTGCT GCTGTTGTTT
CAGGGCCGCT GGGTGATCCT GAGCATCATG GGGCCGCTGA AATCCGCCAG CCGCATCGCC
GAAAGCATCG CCCACGGCAA CCTCAGCGAA CCGATCGCCG AACCGTCCGG CAAGGACGAA
GCCAGTGCGC TGATCCGCAC GCTGGCAACC ATGCAGCGCG ACCTGCGAGA CATGATCGGT
GTGGTGCGAA GCAACGCCCA CGGCGTCAGC GGCATGAGCG AGCAACTGAG CCACGGCTGC
CATCAGGTGG CCGACAGCAG TCAGCAACAA AGCACCGCCG CCGGCACCAT GGCGGCTGCC
GCAAGCCAGA TGACCGCCAG CATCGAGGAA ATCACCCGTC ACGCCGAGCG CGCGTTGAAC
ATGGCCAGCC AGGCCGAGTC ACTGGCGAAA AACGGCGGGC AGGTGATCCA TCAAGTGGTC
AGCGATATGG ACGACATCGC CCGTTCCGCC CAGCAATCGG CACAGGTGAT CCGCACCCTG
GATCAGGAAT CCGAAGGCAT CTTCAATATC ATTCAGGTGA TCAAAAGCAT CGCCGATCAG
ACCAATCTGC TGGCGCTCAA CGCAGCCATC GAGGCCGCTC GGGCGGGCGA GCAGGGCAGG
GGCTTTGCGG TGGTGGCCGA TGAGGTGCGC AACCTGGCTG CGCGCACCAG CGCCTCGACC
CAGGAAATCG CCGCGATGGT CGCGCGCATC CAGAACAGCA CCCGCGAGGC CGTCAGCAGC
ATGGAGGCCG GTGTCGCCCA GGTCGACAAG GGCATGGCGG TCACCGCCGA CGTCGAACGC
GCGATCCGCG AAATCCTCGA GGCCACCCTG AGCACTACGC AACTGGTCAA CGACATTACC
CGCACCATCG GCGAACAGAG CCAGGCGAGC AACGAGATTG CCCATCAGGT GGAGATGATC
GCGGGCATGT CGGAGGGCAA TAGCAAGGTG ATCGGCGAGA CGGCGAATAC CACGGATGAA
CTGTCGAGTC TGGCGGGGCG GCTGGCGCAG TCGGTGGATC GGTTCAGGTT ATAG
 
Protein sequence
MSIKLRLVLL IATSLLTALI VSLVSYVGNQ RMASAVSDNA VSMSALRNHM EADMMHDALR 
ADVYSAMLVG LSKSTSSADE VRSSVEEHAA HFREVLGENL KLPVNPTIKS ALEQIKPSLD
TYISAGEQIV GLALENPESA QQHLGTFSTA FSQLEEQMAA LSELIETNTR QTSEGTEAAI
HNANVALGIV LFASLLLLLF QGRWVILSIM GPLKSASRIA ESIAHGNLSE PIAEPSGKDE
ASALIRTLAT MQRDLRDMIG VVRSNAHGVS GMSEQLSHGC HQVADSSQQQ STAAGTMAAA
ASQMTASIEE ITRHAERALN MASQAESLAK NGGQVIHQVV SDMDDIARSA QQSAQVIRTL
DQESEGIFNI IQVIKSIADQ TNLLALNAAI EAARAGEQGR GFAVVADEVR NLAARTSAST
QEIAAMVARI QNSTREAVSS MEAGVAQVDK GMAVTADVER AIREILEATL STTQLVNDIT
RTIGEQSQAS NEIAHQVEMI AGMSEGNSKV IGETANTTDE LSSLAGRLAQ SVDRFRL