More than 300 homologs were found in PanDaTox collection
for query gene SO_3282 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009997  Sbal195_3134  methyl-accepting chemotaxis sensory transducer  80.81 
 
 
667 aa  1115    Shewanella baltica OS195  Bacteria  normal  0.0135223  normal  0.80442 
 
 
-
 
NC_009092  Shew_1310  methyl-accepting chemotaxis sensory transducer  62.22 
 
 
667 aa  823    Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_3282  methyl-accepting chemotaxis protein  100 
 
 
667 aa  1361    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_1387  methyl-accepting chemotaxis sensory transducer  81.11 
 
 
667 aa  1118    Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3114  methyl-accepting chemotaxis sensory transducer  65.52 
 
 
667 aa  884    Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2345  putative methyl-accepting chemotaxis sensory transducer  56.61 
 
 
666 aa  753    Shewanella amazonensis SB2B  Bacteria  normal  normal  0.60686 
 
 
-
 
NC_009901  Spea_1322  methyl-accepting chemotaxis sensory transducer  61.17 
 
 
667 aa  805    Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2976  methyl-accepting chemotaxis sensory transducer  80.66 
 
 
667 aa  1113    Shewanella baltica OS155  Bacteria  hitchhiker  0.000241408  n/a   
 
 
-
 
NC_010506  Swoo_1568  methyl-accepting chemotaxis sensory transducer  63.87 
 
 
667 aa  853    Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2637  methyl-accepting chemotaxis sensory transducer  79.01 
 
 
667 aa  1077    Shewanella putrefaciens CN-32  Bacteria  normal  0.0295827  n/a   
 
 
-
 
NC_009665  Shew185_2990  methyl-accepting chemotaxis sensory transducer  81.11 
 
 
667 aa  1118    Shewanella baltica OS185  Bacteria  normal  0.413203  n/a   
 
 
-
 
NC_008321  Shewmr4_1243  methyl-accepting chemotaxis sensory transducer  90.7 
 
 
667 aa  1202    Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1313  methyl-accepting chemotaxis sensory transducer  90.7 
 
 
667 aa  1205    Shewanella sp. MR-7  Bacteria  decreased coverage  0.00146838  normal 
 
 
-
 
NC_008345  Sfri_1146  methyl-accepting chemotaxis sensory transducer  53.68 
 
 
668 aa  717    Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.970933  n/a   
 
 
-
 
NC_008577  Shewana3_1293  methyl-accepting chemotaxis sensory transducer  90.4 
 
 
667 aa  1202    Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_002906  methyl-accepting chemotaxis protein  33.62 
 
 
678 aa  380  1e-104  Vibrio sp. Ex25  Bacteria  normal  0.816112  n/a   
 
 
-
 
NC_009654  Mmwyl1_1385  methyl-accepting chemotaxis sensory transducer  34.28 
 
 
683 aa  355  2e-96  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_0117  methyl-accepting chemotaxis protein  30.95 
 
 
658 aa  289  1e-76  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0071  histidine kinase, HAMP region: chemotaxis sensory transducer  30.56 
 
 
658 aa  285  2.0000000000000002e-75  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0210  methyl-accepting chemotaxis sensory transducer  31.88 
 
 
632 aa  274  3e-72  Pseudomonas putida W619  Bacteria  normal  0.248487  normal  0.150257 
 
 
-
 
NC_007492  Pfl01_5515  chemotaxis sensory transducer  29.46 
 
 
658 aa  271  2.9999999999999997e-71  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.501051  normal  0.584272 
 
 
-
 
NC_010676  Bphyt_6894  methyl-accepting chemotaxis sensory transducer  27.92 
 
 
657 aa  253  8.000000000000001e-66  Burkholderia phytofirmans PsJN  Bacteria  normal  0.068141  normal  0.373533 
 
 
-
 
NC_012917  PC1_3437  methyl-accepting chemotaxis sensory transducer  27.96 
 
 
646 aa  252  1e-65  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.143807  n/a   
 
 
-
 
NC_007952  Bxe_B2939  methyl-accepting chemotaxis sensory transducer  28.53 
 
 
672 aa  251  3e-65  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_3594  methyl-accepting chemotaxis sensory transducer  27.46 
 
 
646 aa  250  8e-65  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0772  methyl-accepting chemotaxis sensory transducer  27.91 
 
 
646 aa  249  1e-64  Dickeya zeae Ech1591  Bacteria  hitchhiker  0.00540264  n/a   
 
 
-
 
NC_007760  Adeh_0030  methyl-accepting chemotaxis sensory transducer  32.28 
 
 
651 aa  246  9.999999999999999e-64  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4315  methyl-accepting chemotaxis sensory transducer  27.91 
 
 
656 aa  243  6e-63  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_0045  methyl-accepting chemotaxis sensory transducer  32.76 
 
 
651 aa  242  2e-62  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4309  methyl-accepting chemotaxis sensory transducer  27.66 
 
 
659 aa  242  2e-62  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.226298 
 
 
-
 
NC_009436  Ent638_0366  methyl-accepting chemotaxis sensory transducer  29.04 
 
 
643 aa  239  9e-62  Enterobacter sp. 638  Bacteria  normal  normal  0.0151066 
 
 
-
 
NC_012880  Dd703_0792  methyl-accepting chemotaxis sensory transducer  27.47 
 
 
651 aa  238  3e-61  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0033  methyl-accepting chemotaxis sensory transducer  33.61 
 
 
651 aa  237  6e-61  Anaeromyxobacter sp. K  Bacteria  normal  0.250878  n/a   
 
 
-
 
NC_010552  BamMC406_4192  methyl-accepting chemotaxis sensory transducer  29.49 
 
 
660 aa  236  7e-61  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0520721  normal  0.510764 
 
 
-
 
NC_012856  Rpic12D_3066  methyl-accepting chemotaxis sensory transducer  29.48 
 
 
662 aa  236  1.0000000000000001e-60  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_0631  chemotaxis sensory transducer  30.33 
 
 
656 aa  235  2.0000000000000002e-60  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00821954  n/a   
 
 
-
 
NC_008391  Bamb_3714  methyl-accepting chemotaxis sensory transducer  29.47 
 
 
660 aa  235  2.0000000000000002e-60  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_009802  CCC13826_1039  protease htpx  29.9 
 
 
656 aa  233  1e-59  Campylobacter concisus 13826  Bacteria  normal  0.0758551  n/a   
 
 
-
 
NC_010682  Rpic_3412  methyl-accepting chemotaxis sensory transducer  29.5 
 
 
662 aa  232  2e-59  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3221  methyl-accepting chemotaxis sensory transducer  28.87 
 
 
660 aa  231  5e-59  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.229974 
 
 
-
 
NC_008061  Bcen_4070  methyl-accepting chemotaxis sensory transducer  28.64 
 
 
660 aa  228  3e-58  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4296  methyl-accepting chemotaxis sensory transducer  28.64 
 
 
660 aa  228  3e-58  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0837  histidine kinase, HAMP region: chemotaxis sensory transducer  27.54 
 
 
680 aa  227  7e-58  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.0272085 
 
 
-
 
NC_010002  Daci_3084  methyl-accepting chemotaxis sensory transducer  31.24 
 
 
719 aa  222  9.999999999999999e-57  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  28.68 
 
 
680 aa  221  1.9999999999999999e-56  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_003295  RSc3136  putative methyl-accepting chemotaxis transmembrane protein  29.29 
 
 
661 aa  220  5e-56  Ralstonia solanacearum GMI1000  Bacteria  normal  0.598743  normal 
 
 
-
 
NC_009075  BURPS668_A1080  methyl-accepting chemotaxis protein  26.79 
 
 
687 aa  218  2.9999999999999998e-55  Burkholderia pseudomallei 668  Bacteria  normal  0.469209  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0994  methyl-accepting chemotaxis protein  28.62 
 
 
678 aa  217  5.9999999999999996e-55  Burkholderia pseudomallei 1106a  Bacteria  normal  0.799426  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2308  methyl-accepting chemotaxis protein II  27.95 
 
 
684 aa  214  2.9999999999999995e-54  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0922  methyl-accepting chemotaxis sensory transducer  27.98 
 
 
674 aa  215  2.9999999999999995e-54  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II1684  methyl-accepting chemotaxis protein I  26.36 
 
 
676 aa  211  5e-53  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01222  methyl-accepting chemotaxis protein  29.59 
 
 
580 aa  208  2e-52  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.566871  n/a   
 
 
-
 
NC_011992  Dtpsy_3481  methyl-accepting chemotaxis sensory transducer  29.47 
 
 
674 aa  204  3e-51  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4123  methyl-accepting chemotaxis sensory transducer  29.12 
 
 
674 aa  204  5e-51  Acidovorax sp. JS42  Bacteria  normal  0.162807  normal  0.87643 
 
 
-
 
NC_013173  Dbac_0026  methyl-accepting chemotaxis sensory transducer  25.8 
 
 
686 aa  202  1.9999999999999998e-50  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  36.34 
 
 
639 aa  194  4e-48  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.98 
 
 
626 aa  191  4e-47  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0316  methyl-accepting chemotaxis protein  33.75 
 
 
652 aa  189  1e-46  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0140  putative methyl-accepting chemotaxis protein  27.3 
 
 
684 aa  189  1e-46  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0610174  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  37.46 
 
 
636 aa  187  4e-46  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  33.43 
 
 
637 aa  186  9e-46  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  31.78 
 
 
623 aa  186  1.0000000000000001e-45  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  29.54 
 
 
626 aa  186  1.0000000000000001e-45  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3666  chemotaxis transducer  37.6 
 
 
541 aa  186  1.0000000000000001e-45  Pseudomonas aeruginosa PA7  Bacteria  normal  0.260935  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  35.06 
 
 
773 aa  186  1.0000000000000001e-45  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  33.43 
 
 
640 aa  185  3e-45  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_008345  Sfri_3002  methyl-accepting chemotaxis sensory transducer  38.37 
 
 
705 aa  184  5.0000000000000004e-45  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.568622  n/a   
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  30.4 
 
 
628 aa  184  6e-45  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  31.26 
 
 
627 aa  184  6e-45  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  30.18 
 
 
645 aa  182  1e-44  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3266  methyl-accepting chemotaxis sensory transducer  38.03 
 
 
543 aa  182  2e-44  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  33.72 
 
 
629 aa  182  2e-44  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3580  methyl-accepting chemotaxis protein  34.84 
 
 
546 aa  182  2e-44  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  33.8 
 
 
638 aa  182  2e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  33.52 
 
 
541 aa  182  2e-44  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  37.57 
 
 
620 aa  182  2.9999999999999997e-44  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  37.57 
 
 
620 aa  181  2.9999999999999997e-44  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  37.57 
 
 
620 aa  181  2.9999999999999997e-44  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  34.3 
 
 
633 aa  181  2.9999999999999997e-44  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  31.11 
 
 
627 aa  181  4.999999999999999e-44  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  33.25 
 
 
548 aa  180  5.999999999999999e-44  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  34.71 
 
 
628 aa  180  7e-44  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  32.52 
 
 
557 aa  180  8e-44  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_008463  PA14_43710  putative methyl-accepting chemotaxis transducer  36.77 
 
 
541 aa  180  9e-44  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  29.61 
 
 
630 aa  179  1e-43  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  29.61 
 
 
630 aa  179  1e-43  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_2301  methyl-accepting chemotaxis sensory transducer  33.05 
 
 
632 aa  179  1e-43  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.05 
 
 
626 aa  179  1e-43  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  29.61 
 
 
630 aa  179  1e-43  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  29.61 
 
 
630 aa  179  1e-43  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_009654  Mmwyl1_0921  methyl-accepting chemotaxis sensory transducer  26.25 
 
 
677 aa  179  1e-43  Marinomonas sp. MWYL1  Bacteria  normal  0.787316  normal 
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  35.15 
 
 
621 aa  179  2e-43  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_009654  Mmwyl1_0877  methyl-accepting chemotaxis sensory transducer  31.57 
 
 
540 aa  179  2e-43  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.11332 
 
 
-
 
NC_004578  PSPTO_4541  methyl-accepting chemotaxis protein  37.22 
 
 
541 aa  179  2e-43  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.726322  n/a   
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.61 
 
 
630 aa  179  2e-43  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  35.26 
 
 
620 aa  179  2e-43  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  36.49 
 
 
620 aa  178  3e-43  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  34.56 
 
 
619 aa  178  3e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  37.75 
 
 
541 aa  178  3e-43  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_007005  Psyr_2634  histidine kinase, HAMP region: chemotaxis sensory transducer  34.5 
 
 
542 aa  178  4e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.917034  normal 
 
 
-
 
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