| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2345 |
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| Symbol | |
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| ID | 4604595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2813492 |
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| End bp | 2815492 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781743 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_928220 |
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| Protein GI | 119775480 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.60686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACTATA AAGAATGGCC ACTGGCCAAA CAGATAGGCA TTTTAGCAAC TCTGCTTACC
CTGGTGGTGT TTGCCCTGAT GGGATTGATA GCCTACAAGT CGGCATCCAA TGCTTTGCAG
CAAAAAGGCA CCCACGCCAT GTCATCCAAG GCTGAAGCCG TTACCGACAT GCTGGCACTG
CAGTACCGAA GCCTTGCCAC CCTCGCCCAC CGCAATGCCG ATGTTCTCAG AGAAATGTAT
CCCGGCAGCT TTTATAAATC CGGCAACACA GTCAAAGTAC TGGGGCAAGA CACACCGGCG
CTGATGCACG ACAAAGAACA AATCAACTCG ACCAAGAGCA AGGTTGACCG CTATGCCAAC
CTCACCGGCG GCACCGCCAC CGTGTTTGTG AAAGACGGCG ACGACTTTTT ACGGATTTCT
ACCTCACTCA AAAAGGCCGA TGGCAGCCGG GCACTGGGGA CTTATCTCGG TAAAACCCAC
CCGGCATACA ATGTTTTGAT GCAGGGTGGA CAATATGAGG GCTACGCCAA ACTCTTCGGT
CACGACTATA TGACTGTGTA TCGGGCGGTT AAAAACCCGT CCGGAGAAGT GGTAGCCGTA
CTCTATATCG GCTTTGACAT CGGCGACTCA CTGACCCAGC TGAAAGCCGC AGTAAGCCGC
CTGAAGGTTG AAAAAACCGG CCACTTTATG TTGTTAAACC AAAAGGATGA GGTGGTATAC
GCCCAGGAGA GTCAGGCAGG CGAGCCCTTG AATGCCAGTA TGCTCGAGGG TCTGTCGCCT
TCAGACCTGC CAGTAGGTAG CGGTGAAATG CAGTTTACCG ACAATCAGGA ACTGGAGAGA
TATCTAATCA CCCGCGACAT TCCCGGTTGG CACTGGCGCC TGATAGCATC GGTCCCCATG
GCTGAGCTCC ATGAGGAGAG TGTGGCCCTG CTCAAGGTCA ACACCCTGCT GTCGATAGGC
GCCATTCTGT TTATCACCCT GAGCCTGTCA TGGGTGTTGC TGCGGGCACT TAAGCCCTTA
ACTGACTTGA AAACCCAGCT TGAAGGTCTG GGTCGGGGTG AATTGGATCA ACATTGGCAA
ACCAGCCCTG CCGATACCCA CAACGAAGTG GACCATATTC GCAACAGTGT TGCGACCATG
GCGGGCAATC TGAAAACCCT GATTGAATCG CTGAAATCAT CTGTCACCAC ACTGGGCACC
ATGGCCGAAG ATGCCCGGCA AATCGCCGCG CAAAATGGCG ATGAAGCCAC AGCGCTGATG
GCCCAAACCG ACCAAATCGC CACCGCCATC GAAGAAATGT CTACCTCTAT ACGCGATGTG
GCTGAGCATT CCAGTGACGG GGCGCAGCAG AGCCAGAGCG TGGACAGTGC CGCCAAAGAA
GGTCAGAAAC GGCTCGATGG TATGGTAGCG GACCTTGGCC GCCTCAGTGA GGTTTTGGCG
GCAAGCCACG ATGCGGTTGA ACAGGTTTCC AAAGAGAGTG AAGCTATCAG CCAGGTCACC
GAAGTCATTA ACAGCATTGC CGAACAGACC AATTTGCTGG CGCTGAATGC CGCTATCGAA
GCGGCCCGAG CCGGTGAGCA GGGCCGCGGC TTTGCGGTGG TTGCCGATGA AGTCCGAACC
CTCGCCAGCC GTACCCAAAG CTCTATTCAG GAAATCAGTA AAACCATTGG CAATCTTCAG
GATAAGGTGC GCAGCACCGC AGCCCAGATG AAAAAAGCCC ATGAGCTTGG ACAAAGCTGC
GCCGAGCAGG GCAGTATCAC GGGCGAGGAA CTGGATACCA TTACCGGCCG TATCGGAGAT
TTGGCCACAG TTTCTGCCAG CATTGCCAGC GCCACCCAGC AGCAGAGCAC TGTCGCCGAA
GACATTACCC GCAATCTGCA CCTGATAAGT GACCTTGCCC GGGAAGGAGA GTTCCGGGCT
GGCGCCACGG TGGACAGCGC CAATCAGCTC AGGGATTTGG CGCGGGATCT GACCGCGCGG
ATTGGGGTGT TCAGAACCTG A
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| Protein sequence | MNYKEWPLAK QIGILATLLT LVVFALMGLI AYKSASNALQ QKGTHAMSSK AEAVTDMLAL
QYRSLATLAH RNADVLREMY PGSFYKSGNT VKVLGQDTPA LMHDKEQINS TKSKVDRYAN
LTGGTATVFV KDGDDFLRIS TSLKKADGSR ALGTYLGKTH PAYNVLMQGG QYEGYAKLFG
HDYMTVYRAV KNPSGEVVAV LYIGFDIGDS LTQLKAAVSR LKVEKTGHFM LLNQKDEVVY
AQESQAGEPL NASMLEGLSP SDLPVGSGEM QFTDNQELER YLITRDIPGW HWRLIASVPM
AELHEESVAL LKVNTLLSIG AILFITLSLS WVLLRALKPL TDLKTQLEGL GRGELDQHWQ
TSPADTHNEV DHIRNSVATM AGNLKTLIES LKSSVTTLGT MAEDARQIAA QNGDEATALM
AQTDQIATAI EEMSTSIRDV AEHSSDGAQQ SQSVDSAAKE GQKRLDGMVA DLGRLSEVLA
ASHDAVEQVS KESEAISQVT EVINSIAEQT NLLALNAAIE AARAGEQGRG FAVVADEVRT
LASRTQSSIQ EISKTIGNLQ DKVRSTAAQM KKAHELGQSC AEQGSITGEE LDTITGRIGD
LATVSASIAS ATQQQSTVAE DITRNLHLIS DLAREGEFRA GATVDSANQL RDLARDLTAR
IGVFRT
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