| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1310 |
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| Symbol | |
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| ID | 4922707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1518535 |
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| End bp | 1520538 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640162850 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001093438 |
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| Protein GI | 127512241 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTATA AAAACTGGCC TATCGCCAAA CAGATAGGCG CACTTGCCCT GATCCTCACC
GTCGTCGTAT TTGCCATTCT CAGCAGCGTC TCCTACATCA CAGCCGCCAA CGTGCTGGAA
GATAAAGGTA AGACGGCCGT AAAAGCGCAG ATGCACAGCA CCGCCGACCT GATTGAACTC
GAATACAACA GCCTGCTGTC TCTCGCCAGA CGCAACGCCG ATGTGCTCAG AGCCATGTAC
CCAGGTCAAT TCTTCAAGCC AGATAAGACC GTCTTGGTCA TGGGGAAACC CACCCCGGCG
CTGGTACACG AGCGCGAACA GATCAATGCC TCCAAGAGTA AGGTAGATCG CTACTCTAAC
CTCACCGGCG GTAACGCCAC CGTCTTCGTA CGCGACGGCG ACGACTTTAT CCGCATCTCC
ACCTCGCTGA AAAAAGCCGA CGGCAAACGC GCCCTGGGCA CCTACCTGGG TAAGAAGCAC
CCGGGCTACG GCGCGCTGAT GGCGGGCAAA GAGTATGAAG GCTACGCCAG ACTGTTTGGC
AAAGACTATA TGACAGTCTA TCGCCCCATC ACGGGCCCAC AGGGCGACAT CATAGGCATA
CTCTATATCG GCTTCGATAT CTCAGAGGCG CTGACCGAGC TACAACGCTC CATGAACCAG
CTCAAGCTGG AGGAGTCGGG TTACTTCACC CTGATCCGCA ACGTGGACAA CGCCATCATC
GCCCAGCCCA ATCAGGAGTC GGGCACCATA TTGACAGAGG CGATACTCGA CGGCCTCTCT
CTTGACGCGG CCAAACGCGG CGGCCAGGAG AGCGAATACC TCAATAGCAA CAAGGAGCCC
ATGTACGCCT ACGCCGTCAC CATTCCCGGC TGGCAATGGA CCCTGCTGGG TCAGGCCAAG
AAACGTGAGC TGAACGAAGA GAGCCTGAAA CTGCTGAGCA TCAATGCCGG TGTCGCCGCC
GTAGGCGTGC TGCTGATCAC CCTGCTGCTC TCCATGGTGC TGATTAAGAC ACTGCGCCCG
CTGCGCCACC TGCAGCACCA GCTCACCGAG CTCGGCAAGG GCGACCTGAC TCAAGAGTTC
GACCAGGTCA GCCCAGACAC AGACAACGAG GTCGACAGAA TCACCCACGC CGCCCGCCAG
ATGGCACTGA GCCTGCGCGA ACTGGTCGGT GCCCTGCGCG CCTCGGTTAA TACGCTTGAG
GAGCAGGCCA GCAGCGCCCA GGAAGTGGCC AGACTCAACG GCGAAGAGGC CCAGCAGCTG
ATGGCGCAGA CCGACCAGAT CGCCACGGCC ATCGAAGAGA TGTCCACCTC GGTGCGCGAC
GTGGCCAACC ACGCCAGCGA AGGCGCCAGC CAGAGCCAGC AGGTCGACAA CGCCTCCCGC
GATGGCCACC AGCAGCTCGA CCAACTGGTG CAGGGCCTAG GCAAACTCAG CGAGCAGCTC
GATGCCAGCC ATATGAGCGT CGAGAACGTC AGCAAGGAAA GCGAGGCGAT AAGCCAGGTC
ACCGAGGTGA TCAACAGCAT CGCCGAGCAG ACCAACCTGC TGGCACTCAA CGCCGCCATC
GAGGCCGCCC GCGCCGGCGA ACAGGGCCGC GGCTTCGCCG TAGTGGCCGA CGAGGTGAGA
ACCCTGGCCC AGCGTACTCA GACCTCGATC TCGGAGATCA GCCAGACCAT CACTCAGCTA
CAGCAGCAGA TCAAGCTCAC CGCCGAGCAG ATGGGCCAGA GCCACCAGCT GGGCACCGCC
TCGGCCGCCC AGGGACAGGA GGCCGCGACT AACCTCAACC AGATCACCAT CAGTATCGGG
GAACTGGCTA TAGCCTCCAG CAGCATCGCC AGCGCCACAG AGCAGCAGAG CGCGGTCGCC
GACGAGATCA CCCGCAACCT ACATGAGATC ACCGAGCTCG CCCGCGACGG CGAACAGCGC
GCCGGCGACA CAGTCGACGC CGCCCAAAAC CTCTCCCACA TCGCCGCCGA GATCAAACAG
AAGATCAGCG TGTTTAAGTC GTAA
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| Protein sequence | MNYKNWPIAK QIGALALILT VVVFAILSSV SYITAANVLE DKGKTAVKAQ MHSTADLIEL
EYNSLLSLAR RNADVLRAMY PGQFFKPDKT VLVMGKPTPA LVHEREQINA SKSKVDRYSN
LTGGNATVFV RDGDDFIRIS TSLKKADGKR ALGTYLGKKH PGYGALMAGK EYEGYARLFG
KDYMTVYRPI TGPQGDIIGI LYIGFDISEA LTELQRSMNQ LKLEESGYFT LIRNVDNAII
AQPNQESGTI LTEAILDGLS LDAAKRGGQE SEYLNSNKEP MYAYAVTIPG WQWTLLGQAK
KRELNEESLK LLSINAGVAA VGVLLITLLL SMVLIKTLRP LRHLQHQLTE LGKGDLTQEF
DQVSPDTDNE VDRITHAARQ MALSLRELVG ALRASVNTLE EQASSAQEVA RLNGEEAQQL
MAQTDQIATA IEEMSTSVRD VANHASEGAS QSQQVDNASR DGHQQLDQLV QGLGKLSEQL
DASHMSVENV SKESEAISQV TEVINSIAEQ TNLLALNAAI EAARAGEQGR GFAVVADEVR
TLAQRTQTSI SEISQTITQL QQQIKLTAEQ MGQSHQLGTA SAAQGQEAAT NLNQITISIG
ELAIASSSIA SATEQQSAVA DEITRNLHEI TELARDGEQR AGDTVDAAQN LSHIAAEIKQ
KISVFKS
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