Gene Shewmr7_0837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0837 
Symbol 
ID4256630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp950421 
End bp952121 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content51% 
IMG OID638121448 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_736893 
Protein GI114046343 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGGTT TTTTAAAAGA TTTACGGATC AAATATAAGA TGGGCAGCCT TATCGGCATC 
ATGCTGCTAC TGATGTTGTT ATTAGCGGCT TTTAGCCTAC TAAAGATGAA GCGGGTAACG
GATGAAATCC ACACTATTAC CGCTGAAAAC CTCCCCCTAG TGAAGTTATC GAGTGAGGTC
ACTATTTTAC AGCTCGAGAG TTCGATTAGC CTTGAAAAGG CTTTTCGCGC TTCAGAGATC
CCAGTCTCAG CCCAGGAGCG ATTAATTGAA GGTTTTATTG GTGAAGTGAT TCAACATAAA
GAGCGAATTA ACGGCGAGTT ACTCTCCACA CAGACCATGC TAAATGAGGC GTTAACCCTC
CCTCAACCGC CTGAACTACG TGATAAAACC CAACAATTGA TCCAAGAAGT CACCGACATT
ATTCGCGTTT ATCGCGACTA TGATGCCCAG CTAGCGACTG TGGTGAATGC GATACAGCAA
CATACTCAGG CCACGGCGTT GGTGCAGCAG GTGAGCGACC TTGAGCGCAC TCAATCCCAA
TTCAACACCC AGCTCAGCCA GTTTGCGCAG CGTTTAGAGC AAATGACCCA AACCGCGGTA
TCCATCACCG AGGATGAGGA GAAAAGCGCG ATTTACGGCC TGATGGTGAT TTCGTCGGTC
GCCCTCATCT TGGGATTGGG CATCGGCATG TTATTTAGTC AATACATAGT GCGGTCTATT
ACGCGCTTGC GTAATGCCGC CGCCATGATG GAGTCGGGCA ACTTTAGCCG AGTGCTGCAA
GTAGAATCTA AGGACGAGCT TGGCGAGTTA ACCCTAAGCA TGAATCAAAT GGCCTTGACC
CTGAGTCAAA CCGTGGGGCA TGTGATTGGT CGCAGTGAAG AAATTGCCTC TATGGTGACA
GAGCTCAATG CGGTGGCAGA AAATAATCGC AGGGCAATAC TCAGCCAGCA GGAAGATACT
GACCAAGTCG CCGCCTCGAT GACACAAATG GCGGCGACCA TTACCGAGGT TGCTAGCAGC
GCCGAAACGG CATCCTTTTC GGCGGGCCAA GCGGAAGGCC GAGCCAAGGA CAGCTGCGCC
GTTGTGGAGG CGAGTGAGCG GATCACTCAG CAACTAGTAG AGAGTGCCCA GCAATCGAGC
CAACTTATCC AGCAACTCCA AGCCAGCACA GGCAAAATTT TAAACTTTGT TTCCGTGGTC
GATGCCATTG CGGGGCAGAC GAATTTACTG GCGTTAAACG CCTCCATTGA GGCGGCTAGG
GCGGGCGATC AGGGACGGGG TTTTGCCGTT GTCGCCGACG AGGTGCGCGC CCTCGCGACG
CGCAGCCAAA CCGCCACCCA GGAAATCAGT CAGCTTATTC AAACCTTAGT GCTTGATGCC
CAGTCGGCCG TCGACTCATT TGGTAAAAAT GAGCAACAAA TCAATGAGTC ATCCCTCCAA
GTTAAGCAAA TTAAACAAAA CTTATCTGAG ATCTTAGATG CCTTAACTCA GCTGTCACAG
GCTAATGCCC AAGTCGCCAC CGCCAGTGAG GAGCAGGCGG TCACCGCCGA AGATATCAGC
GAGCGTTTAA ATACCATTCG TGACTCGGGA GAATCTGTGC TTAATAGCGC ATTTGAAACG
GCGAAGGCCA GCGAATCCCT CTCGCAACAG GCCAACACCC TACGCGAAGC CATGCAGCAA
TTTAAGGTGC GTGAAGCCTA A
 
Protein sequence
MLGFLKDLRI KYKMGSLIGI MLLLMLLLAA FSLLKMKRVT DEIHTITAEN LPLVKLSSEV 
TILQLESSIS LEKAFRASEI PVSAQERLIE GFIGEVIQHK ERINGELLST QTMLNEALTL
PQPPELRDKT QQLIQEVTDI IRVYRDYDAQ LATVVNAIQQ HTQATALVQQ VSDLERTQSQ
FNTQLSQFAQ RLEQMTQTAV SITEDEEKSA IYGLMVISSV ALILGLGIGM LFSQYIVRSI
TRLRNAAAMM ESGNFSRVLQ VESKDELGEL TLSMNQMALT LSQTVGHVIG RSEEIASMVT
ELNAVAENNR RAILSQQEDT DQVAASMTQM AATITEVASS AETASFSAGQ AEGRAKDSCA
VVEASERITQ QLVESAQQSS QLIQQLQAST GKILNFVSVV DAIAGQTNLL ALNASIEAAR
AGDQGRGFAV VADEVRALAT RSQTATQEIS QLIQTLVLDA QSAVDSFGKN EQQINESSLQ
VKQIKQNLSE ILDALTQLSQ ANAQVATASE EQAVTAEDIS ERLNTIRDSG ESVLNSAFET
AKASESLSQQ ANTLREAMQQ FKVREA