Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0837 |
Symbol | |
ID | 4256630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 950421 |
End bp | 952121 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638121448 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_736893 |
Protein GI | 114046343 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGGTT TTTTAAAAGA TTTACGGATC AAATATAAGA TGGGCAGCCT TATCGGCATC ATGCTGCTAC TGATGTTGTT ATTAGCGGCT TTTAGCCTAC TAAAGATGAA GCGGGTAACG GATGAAATCC ACACTATTAC CGCTGAAAAC CTCCCCCTAG TGAAGTTATC GAGTGAGGTC ACTATTTTAC AGCTCGAGAG TTCGATTAGC CTTGAAAAGG CTTTTCGCGC TTCAGAGATC CCAGTCTCAG CCCAGGAGCG ATTAATTGAA GGTTTTATTG GTGAAGTGAT TCAACATAAA GAGCGAATTA ACGGCGAGTT ACTCTCCACA CAGACCATGC TAAATGAGGC GTTAACCCTC CCTCAACCGC CTGAACTACG TGATAAAACC CAACAATTGA TCCAAGAAGT CACCGACATT ATTCGCGTTT ATCGCGACTA TGATGCCCAG CTAGCGACTG TGGTGAATGC GATACAGCAA CATACTCAGG CCACGGCGTT GGTGCAGCAG GTGAGCGACC TTGAGCGCAC TCAATCCCAA TTCAACACCC AGCTCAGCCA GTTTGCGCAG CGTTTAGAGC AAATGACCCA AACCGCGGTA TCCATCACCG AGGATGAGGA GAAAAGCGCG ATTTACGGCC TGATGGTGAT TTCGTCGGTC GCCCTCATCT TGGGATTGGG CATCGGCATG TTATTTAGTC AATACATAGT GCGGTCTATT ACGCGCTTGC GTAATGCCGC CGCCATGATG GAGTCGGGCA ACTTTAGCCG AGTGCTGCAA GTAGAATCTA AGGACGAGCT TGGCGAGTTA ACCCTAAGCA TGAATCAAAT GGCCTTGACC CTGAGTCAAA CCGTGGGGCA TGTGATTGGT CGCAGTGAAG AAATTGCCTC TATGGTGACA GAGCTCAATG CGGTGGCAGA AAATAATCGC AGGGCAATAC TCAGCCAGCA GGAAGATACT GACCAAGTCG CCGCCTCGAT GACACAAATG GCGGCGACCA TTACCGAGGT TGCTAGCAGC GCCGAAACGG CATCCTTTTC GGCGGGCCAA GCGGAAGGCC GAGCCAAGGA CAGCTGCGCC GTTGTGGAGG CGAGTGAGCG GATCACTCAG CAACTAGTAG AGAGTGCCCA GCAATCGAGC CAACTTATCC AGCAACTCCA AGCCAGCACA GGCAAAATTT TAAACTTTGT TTCCGTGGTC GATGCCATTG CGGGGCAGAC GAATTTACTG GCGTTAAACG CCTCCATTGA GGCGGCTAGG GCGGGCGATC AGGGACGGGG TTTTGCCGTT GTCGCCGACG AGGTGCGCGC CCTCGCGACG CGCAGCCAAA CCGCCACCCA GGAAATCAGT CAGCTTATTC AAACCTTAGT GCTTGATGCC CAGTCGGCCG TCGACTCATT TGGTAAAAAT GAGCAACAAA TCAATGAGTC ATCCCTCCAA GTTAAGCAAA TTAAACAAAA CTTATCTGAG ATCTTAGATG CCTTAACTCA GCTGTCACAG GCTAATGCCC AAGTCGCCAC CGCCAGTGAG GAGCAGGCGG TCACCGCCGA AGATATCAGC GAGCGTTTAA ATACCATTCG TGACTCGGGA GAATCTGTGC TTAATAGCGC ATTTGAAACG GCGAAGGCCA GCGAATCCCT CTCGCAACAG GCCAACACCC TACGCGAAGC CATGCAGCAA TTTAAGGTGC GTGAAGCCTA A
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Protein sequence | MLGFLKDLRI KYKMGSLIGI MLLLMLLLAA FSLLKMKRVT DEIHTITAEN LPLVKLSSEV TILQLESSIS LEKAFRASEI PVSAQERLIE GFIGEVIQHK ERINGELLST QTMLNEALTL PQPPELRDKT QQLIQEVTDI IRVYRDYDAQ LATVVNAIQQ HTQATALVQQ VSDLERTQSQ FNTQLSQFAQ RLEQMTQTAV SITEDEEKSA IYGLMVISSV ALILGLGIGM LFSQYIVRSI TRLRNAAAMM ESGNFSRVLQ VESKDELGEL TLSMNQMALT LSQTVGHVIG RSEEIASMVT ELNAVAENNR RAILSQQEDT DQVAASMTQM AATITEVASS AETASFSAGQ AEGRAKDSCA VVEASERITQ QLVESAQQSS QLIQQLQAST GKILNFVSVV DAIAGQTNLL ALNASIEAAR AGDQGRGFAV VADEVRALAT RSQTATQEIS QLIQTLVLDA QSAVDSFGKN EQQINESSLQ VKQIKQNLSE ILDALTQLSQ ANAQVATASE EQAVTAEDIS ERLNTIRDSG ESVLNSAFET AKASESLSQQ ANTLREAMQQ FKVREA
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