Gene Pmen_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1571 
Symbol 
ID5109229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1730214 
End bp1731302 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content67% 
IMG OID640502799 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001187067 
Protein GI146306602 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGCCT ACTCCGCTCT CTGGACAGGT ATCGCCATCA GCCTCGCCGG GCTTGCCGCC 
GGCATGCCCT GGCTGATCGG CGCAGGCTGC GCCATCAGTG CGCTGGCTGC GCTTTTTCAG
CGCCCCCCGC GTGCATCCCT GCCTCTCGCT GCAAGCCTGG ATGAAGCCCC CGTCGACACG
ACGCCGCAGC CGCGTGTCGA GCCGCTGCTG CTCGAAGTGC TACCGGCCTG GAGCCAGAAC
CTCGGCCAGG TGCGCCAGCT GGTACAGGAG AACATCCAGC GCCTGTTCGA ACGCTTCGCC
GGGCTCAGTG GCCGCCTGGA GCAGACCCTG AGCAGTTCGG AACAGGCCAT CGGCGGTGGC
GGCGTAGCCG ACAGCCTGCG CGAGGCGCAT CAGCGCCTGG ACGAAGTCAT CGCCTCCTTC
CATGGCGCCA GTGCGCGCAA GAACGAGCTG CTCGGCACTA TCGCCCACCT CGACAGCTAC
GCCAGCGAGC TGCAGAAGAT GTCGAAACTG GTGCAGGACA TCGCCAGCCA GACCAACCTG
CTCGCCCTCA ACGCCGCCAT CGAGGCGGCC CGCGCCGGCG AGCATGGCCG CGGCTTCTCG
GTGGTCGCCG ACGAGGTGCG CAAGCTCTCC AGCCTGTCCG CCGAGACCGG CCAGCGCATG
GGCGAGAAGG TCGGCGAAAT CAACCAGGCG ATCCGCGCCA CGGTGATCGC CGCCGAGGAA
CTCTCAGGCA GCGAGAAGAG CAATCTCGAC TACCTCGACC AGGTCGCCGG CGAAGTGATG
CAGCGCCTGA GCACCAACCT CGACGAACTC TCCAGCAGCT CCCTGCAGCT GCAGCAGGAC
GCCCGCACCA CCCAGGCAGA CATCCAGGAA ATCATCGTCA GCCTGCAGTT CCAGGACCGC
ACCGACCAGA TGCTCGACCA CCTGCAGATC GACCTGGGTC GCCTGCAGCA GGCCGTACGC
GAGCAGGACG GCATCCTCGC CAACCCGACA CGCTGGCTCA AGGAACTGCG CGACCGCTTC
ACCACCGATG AAGAACGCCA CGGTGGTAGA CGCAGCGCCA AACAGCACGA CGACGTGACC
TTTTTCTGA
 
Protein sequence
MLAYSALWTG IAISLAGLAA GMPWLIGAGC AISALAALFQ RPPRASLPLA ASLDEAPVDT 
TPQPRVEPLL LEVLPAWSQN LGQVRQLVQE NIQRLFERFA GLSGRLEQTL SSSEQAIGGG
GVADSLREAH QRLDEVIASF HGASARKNEL LGTIAHLDSY ASELQKMSKL VQDIASQTNL
LALNAAIEAA RAGEHGRGFS VVADEVRKLS SLSAETGQRM GEKVGEINQA IRATVIAAEE
LSGSEKSNLD YLDQVAGEVM QRLSTNLDEL SSSSLQLQQD ARTTQADIQE IIVSLQFQDR
TDQMLDHLQI DLGRLQQAVR EQDGILANPT RWLKELRDRF TTDEERHGGR RSAKQHDDVT
FF