Gene GSU1287 details

Gene Information

• Locus tag: GSU1287
• ID: 2686543
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 1403232
• End bp: 1405115
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637125961
• Product: methyl accepting chemotaxis protein, putative
• Protein accession: NP_952340
• Protein GI: 39996389
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGGGGC CAGAGAGGCT TGATACAGTG GCTTTCGACT TGTTTCGCAG GTTCAGGCAG 
GATGGGGCAG AGGCGGGATG TCCGCCGGGA GGAGCGCCGT CGGCTGTTGC GGACGACAGC 
CTGTTGCGGG AGTTACAGGT CTGGAAGTCG TGCCTTGCGG ATGCTGGCGA TCGGCTGCAG 
CAGGTCACCG GCTCGACCGA AGAAGAGTTT CTTGCCGTAG GCGCGAGGCT CCACGAGTTT 
TACAGCCGCG CGGGCGATAT CGAGCGAATG ACCCGCGGCG TGGCCGAGAA CGTCCTCGGT 
GACGAGTTCG GCAGCGACAT GAAGTCGCTT TCCGCAATTC TCGACCGAAT TGCCGCCTAT 
CTTGGCCAGG CCGACAGCCA GACCGAGCAA CTGACCCAGA CGCTCAGGTC GGTACTCGAA 
CTGATCGACC GGGTTGACAC CCCTCTGGAA GGATTCAGGA AGATCATCAA GAACCTCCAC 
ATGCTCAGCA CCGCCGTCAA GATTGAAAGC GCACGGCTCG GCGAAGGGGC TGCAGGATTC 
AATACCCTCG CCGAGGATGT TGAGCGGCTG TCGGTTTCCA TCAAGGAAAA GTCGACAAGG 
ATTCTCGGAG AAAAGGACTC GCTCGGCCGG GTCATCACCG ACACCCTTGA AAGCATCTCC 
CGCATCGAGG CGAGCCAGCG CGAGGATGTC CGCCGGATCA TCTCCGAAAC CGGAGAGAAC 
CTGGGTGCGC TTAGCACGCT CCATGCCCGC TGTTCCGATG TGGCCAACAA TGTGGCCACC 
CTGTCGGCCG AGATTGCCGA CAGTATTGGC GAAGTGGTCA CGTCCCTCCA GTTTCACGAC 
ATCACCCGTC AGCAGATCGA GCATGTCAAA GAAGCGCTGG AAGATGTCGT TCGCCATCTG 
GACAACCCCG GCGACAATCC CCAGGGAGAT GTGGCCGAGG CGGCCGAGGT CTGCGACCTC 
CAACTGGCAC AGCTCCTCCA CTCGCGGGAT GAGCTCGTGT CGGCGGTGGA GAGGATCATT 
CTCAACCTGC GCGACATCGT GGCTAAAGAA ACGCGCATGT CCGAGGAAAC CCGCGGCATT 
ACCGGCAGCG CCGACCAGAC GGGACATTCG TTCTTCGCCA GGATGGAAGA TGAAATGGCC 
AGCGTCAGCC GGGTTCTCAC CGATAATGTG CGCGCCAAGC GCGATACGGC TTCGGCCATG 
ACGCTGGTGG TCAGTTCGGT GAATGACATT TCGGCCTTTG TGACCGACAT TGAAGAGATT 
GGGACCGAGA TCGAGCTGAT AGCCCTCAAC TCGCAGGTGA AAGCGGCTAA TACCGGCGAC 
GGTGGCGCAG CCCTCGGGGT TCTTGCCGAG TCGATCCAGC ATTTGTCGGT GGATGCCCGC 
ACCCGAACTG GAGACGTTTC GGTAACCCTG CGCGAGGTCA CCGAGGTTAC CGGCCGCCTC 
GTCATGGAAG TGGATGCCGA CGTGAGCTCC GGAACCGACG AGATCGAACG CCTTCTGGTC 
GAGCTCAAGC GGCTGCTCGA CTCGGTTGAG TCAATCAACA GCCGGTTGCT CGGACTGCTT 
GCGGATATGG ACAGTGCGGT GGGAAGCCTT TCGACCGACA TCGAGGCGGC CACCAGCGGT 
CTTTCGGTTC ACAATACCGC CGGTGCCCTG CTCGACGAGG TGGCGACGGC GCTCGAGGAA 
ACGCTGCGCG ATATGCGCCG GGCGGTTCCC GCTGCGACCC GGCGAGGCAA CGGCGGCAAG 
CTGCTGGACT TGGCCCAGCG GTATACCATG CACAGTGAGC GCACCGTCCA TCACCGGGTG 
GTCGGAGGCG GAACCCCGGC GGTCGCGACA GGGGCGACCG CGTCCCCGGG CGACGGCCTC 
GGCGATAACG TGGAACTGTT CTAG 

 

Protein sequence

MEGPERLDTV AFDLFRRFRQ DGAEAGCPPG GAPSAVADDS LLRELQVWKS CLADAGDRLQ 
QVTGSTEEEF LAVGARLHEF YSRAGDIERM TRGVAENVLG DEFGSDMKSL SAILDRIAAY 
LGQADSQTEQ LTQTLRSVLE LIDRVDTPLE GFRKIIKNLH MLSTAVKIES ARLGEGAAGF 
NTLAEDVERL SVSIKEKSTR ILGEKDSLGR VITDTLESIS RIEASQREDV RRIISETGEN 
LGALSTLHAR CSDVANNVAT LSAEIADSIG EVVTSLQFHD ITRQQIEHVK EALEDVVRHL 
DNPGDNPQGD VAEAAEVCDL QLAQLLHSRD ELVSAVERII LNLRDIVAKE TRMSEETRGI 
TGSADQTGHS FFARMEDEMA SVSRVLTDNV RAKRDTASAM TLVVSSVNDI SAFVTDIEEI 
GTEIELIALN SQVKAANTGD GGAALGVLAE SIQHLSVDAR TRTGDVSVTL REVTEVTGRL 
VMEVDADVSS GTDEIERLLV ELKRLLDSVE SINSRLLGLL ADMDSAVGSL STDIEAATSG 
LSVHNTAGAL LDEVATALEE TLRDMRRAVP AATRRGNGGK LLDLAQRYTM HSERTVHHRV 
VGGGTPAVAT GATASPGDGL GDNVELF