286 homologs were found in PanDaTox collection
for query gene GSU1287 on replicon NC_002939
Organism: Geobacter sulfurreducens PCA



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002939  GSU1287  methyl accepting chemotaxis protein, putative  100 
 
 
627 aa  1244    Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2430  methyl-accepting chemotaxis sensory transducer  55.46 
 
 
625 aa  615  1e-175  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00134328  normal 
 
 
-
 
NC_009483  Gura_2996  methyl-accepting chemotaxis sensory transducer  47.57 
 
 
637 aa  496  1e-139  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00186457  n/a   
 
 
-
 
NC_012918  GM21_2622  methyl-accepting chemotaxis sensory transducer  41.11 
 
 
603 aa  397  1e-109  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1591  methyl-accepting chemotaxis sensory transducer  41.28 
 
 
603 aa  389  1e-107  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1741  methyl-accepting chemotaxis sensory transducer  38.51 
 
 
597 aa  357  2.9999999999999997e-97  Geobacter lovleyi SZ  Bacteria  normal  0.049484  n/a   
 
 
-
 
NC_008609  Ppro_1604  methyl-accepting chemotaxis sensory transducer  38.65 
 
 
617 aa  355  1e-96  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00349401  n/a   
 
 
-
 
NC_011769  DvMF_0469  methyl-accepting chemotaxis sensory transducer  33.85 
 
 
608 aa  237  5.0000000000000005e-61  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.149565 
 
 
-
 
NC_013173  Dbac_1419  methyl-accepting chemotaxis sensory transducer  32.42 
 
 
641 aa  219  1e-55  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1542  methyl-accepting chemotaxis sensory transducer  32.15 
 
 
580 aa  211  3e-53  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_2108  methyl-accepting chemotaxis sensory transducer  29.97 
 
 
572 aa  204  4e-51  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.798353  n/a   
 
 
-
 
NC_011145  AnaeK_2481  methyl-accepting chemotaxis sensory transducer  28 
 
 
597 aa  120  6e-26  Anaeromyxobacter sp. K  Bacteria  normal  0.0822598  n/a   
 
 
-
 
NC_011891  A2cp1_2577  methyl-accepting chemotaxis sensory transducer  28.51 
 
 
596 aa  114  4.0000000000000004e-24  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0805708  n/a   
 
 
-
 
NC_007643  Rru_A1396  methyl-accepting chemotaxis sensory transducer  26.22 
 
 
583 aa  113  9e-24  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1376  methyl-accepting chemotaxis sensory transducer  28.85 
 
 
599 aa  105  3e-21  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0139  putative methyl-accepting chemotaxis sensory transducer  24.03 
 
 
569 aa  89  2e-16  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.287103  n/a   
 
 
-
 
NC_011989  Avi_4353  methyl-accepting chemotaxis protein  22.99 
 
 
575 aa  80.9  0.00000000000007  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6729  methyl-accepting chemotaxis sensory transducer  23.27 
 
 
577 aa  77  0.0000000000009  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.340695  normal 
 
 
-
 
NC_007925  RPC_4667  methyl-accepting chemotaxis sensory transducer  22.31 
 
 
590 aa  73.2  0.00000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.304866 
 
 
-
 
NC_010333  Caul_5394  putative methyl-accepting chemotaxis sensory transducer  23.68 
 
 
585 aa  63.2  0.00000001  Caulobacter sp. K31  Bacteria  normal  0.0438487  normal 
 
 
-
 
NC_009485  BBta_2149  hypothetical protein  24.22 
 
 
374 aa  63.2  0.00000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.393338  normal 
 
 
-
 
NC_007520  Tcr_0759  methyl-accepting chemotaxis sensory transducer  23.4 
 
 
406 aa  57.8  0.0000005  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1693  methyl-accepting chemotaxis sensory transducer  23.89 
 
 
598 aa  57.4  0.0000008  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0850375  n/a   
 
 
-
 
NC_007492  Pfl01_3326  chemotaxis sensory transducer  26.49 
 
 
534 aa  57  0.000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3185  putative methyl-accepting chemotaxis sensory transducer  25.48 
 
 
360 aa  56.6  0.000001  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1140  chemotaxis sensory transducer  29.56 
 
 
418 aa  55.1  0.000004  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  24.83 
 
 
610 aa  54.3  0.000006  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009051  Memar_1543  methyl-accepting chemotaxis sensory transducer  22.03 
 
 
947 aa  54.7  0.000006  Methanoculleus marisnigri JR1  Archaea  normal  0.393804  n/a   
 
 
-
 
NC_013202  Hmuk_3145  methyl-accepting chemotaxis sensory transducer  26.39 
 
 
832 aa  54.7  0.000006  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.390275  normal 
 
 
-
 
NC_012850  Rleg_3005  methyl-accepting chemotaxis sensory transducer  25 
 
 
665 aa  53.1  0.00001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_1275  methyl-accepting chemotaxis sensory transducer  28.67 
 
 
470 aa  53.5  0.00001  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_009486  Tpet_1365  methyl-accepting chemotaxis sensory transducer  23.03 
 
 
566 aa  53.1  0.00002  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1661  methyl-accepting chemotaxis protein, putative  24.48 
 
 
622 aa  52.8  0.00002  Methylococcus capsulatus str. Bath  Bacteria  normal  0.325051  n/a   
 
 
-
 
NC_007493  RSP_2440  methyl accepting chemotaxis protein  26.18 
 
 
770 aa  53.1  0.00002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_013158  Huta_2382  methyl-accepting chemotaxis sensory transducer  23.1 
 
 
871 aa  52.8  0.00002  Halorhabdus utahensis DSM 12940  Archaea  normal  0.115192  n/a   
 
 
-
 
NC_011989  Avi_4113  methyl-accepting chemotaxis protein  25.78 
 
 
778 aa  52.4  0.00002  Agrobacterium vitis S4  Bacteria  normal  0.433818  n/a   
 
 
-
 
NC_009943  Dole_0879  methyl-accepting chemotaxis sensory transducer  22.7 
 
 
633 aa  52.8  0.00002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1571  methyl-accepting chemotaxis sensory transducer  22.49 
 
 
362 aa  52.4  0.00002  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_4342  methyl-accepting chemotaxis sensory transducer  25.19 
 
 
525 aa  52  0.00003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1917  methyl-accepting chemotaxis sensory transducer  25.18 
 
 
396 aa  52  0.00003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.386674 
 
 
-
 
NC_013522  Taci_0285  methyl-accepting chemotaxis sensory transducer  30.89 
 
 
411 aa  52  0.00003  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_013923  Nmag_3856  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  26.34 
 
 
419 aa  51.2  0.00005  Natrialba magadii ATCC 43099  Archaea  normal  0.538878  n/a   
 
 
-
 
NC_009784  VIBHAR_05691  histidine kinase  26.67 
 
 
538 aa  51.2  0.00005  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008789  Hhal_0535  methyl-accepting chemotaxis sensory transducer  24.64 
 
 
487 aa  51.6  0.00005  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1294  methyl-accepting chemotaxis protein  25 
 
 
962 aa  50.8  0.00006  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1321  methyl-accepting chemotaxis sensory transducer  21.88 
 
 
566 aa  51.2  0.00006  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00082247  n/a   
 
 
-
 
NC_007796  Mhun_2551  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  25.41 
 
 
765 aa  51.2  0.00006  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.274696 
 
 
-
 
NC_013522  Taci_1590  methyl-accepting chemotaxis sensory transducer  36.61 
 
 
433 aa  51.2  0.00006  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0619  hypothetical protein  22.72 
 
 
579 aa  50.8  0.00007  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_06142  chemotaxis protein  24.25 
 
 
366 aa  50.8  0.00007  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0352354  n/a   
 
 
-
 
NC_011992  Dtpsy_0069  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  26.15 
 
 
432 aa  50.8  0.00007  Acidovorax ebreus TPSY  Bacteria  normal  0.633184  n/a   
 
 
-
 
NC_008340  Mlg_1152  methyl-accepting chemotaxis sensory transducer  25.15 
 
 
484 aa  50.8  0.00007  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.26629  normal 
 
 
-
 
NC_010717  PXO_01024  chemotaxis protein  24.25 
 
 
366 aa  50.8  0.00007  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0730182  n/a   
 
 
-
 
NC_007298  Daro_0724  chemotaxis sensory transducer  25.29 
 
 
405 aa  50.4  0.00009  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.435605 
 
 
-
 
NC_008782  Ajs_0049  methyl-accepting chemotaxis sensory transducer  26.15 
 
 
432 aa  50.4  0.00009  Acidovorax sp. JS42  Bacteria  normal  normal  0.471283 
 
 
-
 
NC_003910  CPS_2050  methyl-accepting chemotaxis protein  27.35 
 
 
704 aa  50.4  0.0001  Colwellia psychrerythraea 34H  Bacteria  normal  0.459277  n/a   
 
 
-
 
NC_011981  Avi_7643  sensory methylation accepting chemotaxis protein  24.04 
 
 
575 aa  50.4  0.0001  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0222  methyl-accepting chemotaxis sensory transducer  27.5 
 
 
642 aa  50.1  0.0001  Caulobacter sp. K31  Bacteria  normal  0.414219  normal  0.376796 
 
 
-
 
NC_011146  Gbem_3013  methyl-accepting chemotaxis sensory transducer with GAF sensor  25.61 
 
 
699 aa  50.1  0.0001  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_1588  methyl-accepting chemotaxis sensory transducer  28.28 
 
 
555 aa  50.1  0.0001  Acidiphilium cryptum JF-5  Bacteria  hitchhiker  0.00716282  n/a   
 
 
-
 
NC_007778  RPB_1414  methyl-accepting chemotaxis sensory transducer  35.63 
 
 
440 aa  50.1  0.0001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0801097  normal 
 
 
-
 
NC_010338  Caul_3214  methyl-accepting chemotaxis sensory transducer  29.34 
 
 
532 aa  50.1  0.0001  Caulobacter sp. K31  Bacteria  normal  normal  0.409706 
 
 
-
 
NC_008347  Mmar10_0811  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  20.54 
 
 
495 aa  50.1  0.0001  Maricaulis maris MCS10  Bacteria  normal  0.371066  hitchhiker  0.000363939 
 
 
-
 
NC_008576  Mmc1_0628  methyl-accepting chemotaxis sensory transducer  30 
 
 
675 aa  50.1  0.0001  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_1608  methyl-accepting chemotaxis sensory transducer  23.53 
 
 
558 aa  50.1  0.0001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1104  methyl-accepting chemotaxis sensory transducer  25.13 
 
 
792 aa  50.1  0.0001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1141  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  24.22 
 
 
501 aa  49.3  0.0002  Caulobacter sp. K31  Bacteria  normal  0.489477  hitchhiker  0.000166409 
 
 
-
 
NC_010338  Caul_1355  methyl-accepting chemotaxis sensory transducer  24.37 
 
 
494 aa  48.9  0.0002  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1304  methyl-accepting chemotaxis protein  23.87 
 
 
566 aa  49.7  0.0002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4682  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
441 aa  49.3  0.0002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2933  histidine kinase, HAMP region: chemotaxis sensory transducer  26.2 
 
 
540 aa  49.3  0.0002  Dechloromonas aromatica RCB  Bacteria  decreased coverage  1.3489100000000001e-18  normal 
 
 
-
 
NC_007492  Pfl01_4758  chemotaxis sensory transducer  27.53 
 
 
685 aa  49.3  0.0002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0781085  normal  0.27831 
 
 
-
 
NC_010001  Cphy_3669  methyl-accepting chemotaxis sensory transducer  28.39 
 
 
762 aa  49.7  0.0002  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00000205913  n/a   
 
 
-
 
NC_007643  Rru_A1583  chemotaxis sensory transducer  28.46 
 
 
583 aa  49.7  0.0002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.105257  n/a   
 
 
-
 
NC_007958  RPD_1394  chemotaxis sensory transducer  25.77 
 
 
444 aa  49.3  0.0002  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_2936  methyl-accepting chemotaxis sensory transducer  26.15 
 
 
702 aa  49.3  0.0002  Opitutus terrae PB90-1  Bacteria  normal  0.734876  normal 
 
 
-
 
NC_009484  Acry_0681  methyl-accepting chemotaxis sensory transducer  29.03 
 
 
481 aa  48.9  0.0002  Acidiphilium cryptum JF-5  Bacteria  normal  0.123667  n/a   
 
 
-
 
NC_012850  Rleg_3566  putative chemotaxis sensory transducer protein  20.61 
 
 
580 aa  48.9  0.0003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.81094  normal  0.0204442 
 
 
-
 
NC_011989  Avi_1208  methyl-accepting chemotaxis protein  26.17 
 
 
604 aa  48.9  0.0003  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3020  methyl-accepting chemotaxis sensory transducer  24.24 
 
 
697 aa  48.9  0.0003  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2100  methyl-accepting chemotaxis sensory transducer  25.78 
 
 
676 aa  48.5  0.0003  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5250  hypothetical protein  27.68 
 
 
466 aa  48.9  0.0003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.869882  normal  0.134387 
 
 
-
 
NC_008345  Sfri_0216  methyl-accepting chemotaxis sensory transducer  25.5 
 
 
648 aa  48.9  0.0003  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0436  methyl-accepting chemotaxis sensory transducer  25.16 
 
 
564 aa  48.9  0.0003  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3639  methyl-accepting chemotaxis sensory transducer  25.14 
 
 
652 aa  48.9  0.0003  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1237  methyl-accepting chemotaxis sensory transducer with GAF sensor  26.22 
 
 
700 aa  48.1  0.0004  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000000495817 
 
 
-
 
NC_013411  GYMC61_1766  methyl-accepting chemotaxis sensory transducer  26.15 
 
 
536 aa  48.5  0.0004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011989  Avi_2791  methyl-accepting chemotaxis protein  24.64 
 
 
622 aa  48.5  0.0004  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0295  methyl-accepting chemotaxis sensory transducer  26.26 
 
 
542 aa  48.1  0.0004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.579755 
 
 
-
 
NC_009439  Pmen_4122  methyl-accepting chemotaxis sensory transducer  26.4 
 
 
676 aa  48.1  0.0004  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_012039  Cla_0962  MCP-domain signal transduction protein  22.5 
 
 
458 aa  48.5  0.0004  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0606  methyl-accepting chemotaxis sensory transducer  24.47 
 
 
644 aa  48.5  0.0004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.307243 
 
 
-
 
NC_011145  AnaeK_1691  methyl-accepting chemotaxis sensory transducer  27.13 
 
 
553 aa  47.8  0.0005  Anaeromyxobacter sp. K  Bacteria  normal  0.302444  n/a   
 
 
-
 
NC_007951  Bxe_A1954  methyl-accepting chemotaxis sensory transducer  25 
 
 
511 aa  48.1  0.0005  Burkholderia xenovorans LB400  Bacteria  normal  0.249155  normal  0.44726 
 
 
-
 
NC_011891  A2cp1_1762  methyl-accepting chemotaxis sensory transducer  27.13 
 
 
553 aa  48.1  0.0005  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0943  methyl-accepting chemotaxis sensory transducer with Cache sensor  25.57 
 
 
793 aa  48.1  0.0005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.27721  normal 
 
 
-
 
NC_009253  Dred_2904  methyl-accepting chemotaxis sensory transducer  26.85 
 
 
269 aa  48.1  0.0005  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1066  methyl-accepting chemotaxis protein  27.72 
 
 
685 aa  47.8  0.0006  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.395137  n/a   
 
 
-
 
NC_007643  Rru_A0632  chemotaxis sensory transducer  32.63 
 
 
736 aa  47.8  0.0006  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.180969  n/a   
 
 
-
 
NC_007760  Adeh_2187  methyl-accepting chemotaxis sensory transducer  30.48 
 
 
553 aa  47.8  0.0006  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
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