| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0139 |
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| Symbol | |
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| ID | 6407782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 154156 |
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| End bp | 155865 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710048 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001989177 |
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| Protein GI | 192288572 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.287103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCTCAT TGAAACATCC GATTGCCGAC GCCGTTGCGT CGATTGAACT GGTTGCGTCC
CGGATCGAGA CCACCTTCGC CCAGGTTGGC GGCCAGCTCG GCGAAGGCCA TGGCATCTTT
CAGGGCCTCA ACGAGGCACT CGCAGACCTG GCCCGCGAAC TGTCCTCGGC GCAGATCGAA
GGCGCCTCGG GTGCGCTACG CGACATCGCG GGGCGCCTGA AGAGCCTCGC CGACACGCTG
CCGGCCGAAA GCGCGCTGCT CGACCAGCTT CGCCGCAATG TCGCCGAGGC GGGGGCGCTG
CTGAAGCAGC TGCTCAAGCA TGTCGAGATG ATCACCACCA TCGCCCGCAG CGCCAAGATC
GAGTCGGCCT CGCTCGAAGG CGATCGCGAA GGCTTCATCG CCTTCACCCG CGAGGCGTAC
GATCTCGGCA GGGCCGTGCA GTCGTCGATC GAGGCCTGCG TCAAGGATCA GCAGTTGCTG
GCGGCGGCGG TGGAAACCAC CTGGGGCCGG CAAAGCGAAT TCGAGCGGCG CTACCGGCCG
CAGCTCGGCG CCTCCGGCGG CGAGTTGATG TCGGCGTTTG CCGATCTCGG CCGCCAGCGC
AACGACAGCG TCGGCGTCGC CGAGCTCGCG GGCAGCAGCG CCCGCACTAT CAGCGATGTG
GTCGGACGCT CGATCATCTC GTTGCAGGCT GGCGATAGTA CGCGCCAGCG CCTGGAGCAC
GTCTGCGAAG GGCTGCGCCG CGCCGCCGAT CCCGAGCCGA CATTGGTGCC GGACATGACC
GAGGTTCAGC CGCTGCCCCG GCTGCTGGTC AATCTCGAAG CGGTGCAGCT CCACGACACT
CAACAGGAAT TCGATGCCGG CATCGGCGAC ATCGTGCGGG CGCTGTCGAC GATTCTCACC
GAAGTGGCAA CGCTGGTCGA AAAGGGCCGC TCGCTGCACG GCGGCCGGGA GGGTGGTTCG
GCCTCGTTCC TGTCGCGGGT CCGGCAGACC CTCGCCCAGG CCTCCAGCCT GATCGCGATG
TGCGAAGACG GCGGGCGCTC GATCGACGAG GCCCTCAGCG TGGTCGAAAA TACGCTCGAG
AAGTTTCGCG ACGCGATCGC TAACCTCTCC GACTCGGTGG TCGACATTTC GCTGATCGGT
ATGAATGCCG GTCTCCGCGC CGGCCATCTC GGCGCCAAAG GCCGCGCCTT CGTGGTGATC
GCGCACGAAA TGAAGCTGAC CGCCGACCAG ATGACCGGGG CCGCGGTCCG GCTCAGGCCG
CTGCTGAGCG AGATTGCCAA AGTCGGCGAC GACCTTCGGA AGTCGCGCGT GAGCAGCGAC
CAGACCAAAC TGACCAGCAT GGAGAATGCC ATTCTCCAAA CCCTGCACGA CGTCGAGGCC
GGCAACGACC GCCTCGGCGG ACTGATTGGC CGTTTGATCG AGGAAGGCGC CAAGTTCGAC
GCGGTGATGA ATGGCGCCCG CGAACAGATG ACGTCGCTCG GCTCCAGCGC CTCGACGCTG
CCGACGGTAG CAAAATGCCT TGAGGACGCC GTCGGTGATC TGGGCCGCGC TTCGTTCGGT
GATCAGGACG AAGCCGTGCT CGATGAACTC TACGCCCGCT ATACGATGGA GCGCGAACGC
GACGTCCATC GCCAGTTCCT GTTGCCGTTC GGAATCACCG CCAAGCAGGC GGCACCCGCC
GCGAATGATT GTGATTTCGA GTTATTTTAG
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| Protein sequence | MSSLKHPIAD AVASIELVAS RIETTFAQVG GQLGEGHGIF QGLNEALADL ARELSSAQIE
GASGALRDIA GRLKSLADTL PAESALLDQL RRNVAEAGAL LKQLLKHVEM ITTIARSAKI
ESASLEGDRE GFIAFTREAY DLGRAVQSSI EACVKDQQLL AAAVETTWGR QSEFERRYRP
QLGASGGELM SAFADLGRQR NDSVGVAELA GSSARTISDV VGRSIISLQA GDSTRQRLEH
VCEGLRRAAD PEPTLVPDMT EVQPLPRLLV NLEAVQLHDT QQEFDAGIGD IVRALSTILT
EVATLVEKGR SLHGGREGGS ASFLSRVRQT LAQASSLIAM CEDGGRSIDE ALSVVENTLE
KFRDAIANLS DSVVDISLIG MNAGLRAGHL GAKGRAFVVI AHEMKLTADQ MTGAAVRLRP
LLSEIAKVGD DLRKSRVSSD QTKLTSMENA ILQTLHDVEA GNDRLGGLIG RLIEEGAKFD
AVMNGAREQM TSLGSSASTL PTVAKCLEDA VGDLGRASFG DQDEAVLDEL YARYTMERER
DVHRQFLLPF GITAKQAAPA ANDCDFELF
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