99 homologs were found in PanDaTox collection
for query gene Rpal_0139 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_0139  putative methyl-accepting chemotaxis sensory transducer  100 
 
 
569 aa  1135    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.287103  n/a   
 
 
-
 
NC_009485  BBta_6729  methyl-accepting chemotaxis sensory transducer  46.52 
 
 
577 aa  455  1.0000000000000001e-126  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.340695  normal 
 
 
-
 
NC_007925  RPC_4667  methyl-accepting chemotaxis sensory transducer  44.37 
 
 
590 aa  412  1e-113  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.304866 
 
 
-
 
NC_007643  Rru_A1396  methyl-accepting chemotaxis sensory transducer  23.59 
 
 
583 aa  110  8.000000000000001e-23  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1604  methyl-accepting chemotaxis sensory transducer  22.49 
 
 
617 aa  90.5  8e-17  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00349401  n/a   
 
 
-
 
NC_002939  GSU1287  methyl accepting chemotaxis protein, putative  24.03 
 
 
627 aa  89  2e-16  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2996  methyl-accepting chemotaxis sensory transducer  23.12 
 
 
637 aa  89.4  2e-16  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00186457  n/a   
 
 
-
 
NC_013173  Dbac_1419  methyl-accepting chemotaxis sensory transducer  23.43 
 
 
641 aa  86.3  0.000000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2108  methyl-accepting chemotaxis sensory transducer  25.86 
 
 
572 aa  84  0.000000000000006  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.798353  n/a   
 
 
-
 
NC_007517  Gmet_2430  methyl-accepting chemotaxis sensory transducer  24.29 
 
 
625 aa  79.3  0.0000000000002  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00134328  normal 
 
 
-
 
NC_009049  Rsph17029_1105  putative transducer like protein  27.14 
 
 
595 aa  76.6  0.000000000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.827994 
 
 
-
 
NC_012918  GM21_2622  methyl-accepting chemotaxis sensory transducer  24.77 
 
 
603 aa  71.2  0.00000000004  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_012850  Rleg_3566  putative chemotaxis sensory transducer protein  22.54 
 
 
580 aa  71.2  0.00000000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.81094  normal  0.0204442 
 
 
-
 
NC_007493  RSP_2441  methyl-accepting chemotaxis sensory transducer  26.47 
 
 
595 aa  70.5  0.00000000007  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.211149  n/a   
 
 
-
 
NC_011369  Rleg2_3267  putative methyl-accepting chemotaxis sensory transducer  23.55 
 
 
581 aa  69.7  0.0000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.435218 
 
 
-
 
NC_011146  Gbem_1591  methyl-accepting chemotaxis sensory transducer  23.84 
 
 
603 aa  68.9  0.0000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0619  hypothetical protein  22.83 
 
 
579 aa  68.9  0.0000000002  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_4353  methyl-accepting chemotaxis protein  22.08 
 
 
575 aa  66.6  0.000000001  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0469  methyl-accepting chemotaxis sensory transducer  23.92 
 
 
608 aa  64.7  0.000000004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.149565 
 
 
-
 
NC_010814  Glov_1741  methyl-accepting chemotaxis sensory transducer  22.93 
 
 
597 aa  57.8  0.0000005  Geobacter lovleyi SZ  Bacteria  normal  0.049484  n/a   
 
 
-
 
NC_008751  Dvul_1542  methyl-accepting chemotaxis sensory transducer  24.83 
 
 
580 aa  54.3  0.000006  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_1365  methyl-accepting chemotaxis sensory transducer  24.15 
 
 
566 aa  53.5  0.00001  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010333  Caul_5394  putative methyl-accepting chemotaxis sensory transducer  21.97 
 
 
585 aa  52.8  0.00002  Caulobacter sp. K31  Bacteria  normal  0.0438487  normal 
 
 
-
 
NC_010483  TRQ2_1321  methyl-accepting chemotaxis sensory transducer  23.99 
 
 
566 aa  52  0.00003  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00082247  n/a   
 
 
-
 
NC_009674  Bcer98_0489  methyl-accepting chemotaxis sensory transducer  21.78 
 
 
660 aa  51.2  0.00005  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0194  methyl-accepting chemotaxis sensory transducer  22.27 
 
 
622 aa  50.4  0.00008  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00784755  n/a   
 
 
-
 
NC_007517  Gmet_2709  methyl-accepting chemotaxis sensory transducer  29.27 
 
 
537 aa  50.4  0.00009  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3005  methyl-accepting chemotaxis sensory transducer  21.43 
 
 
665 aa  50.4  0.00009  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_5395  methyl-accepting chemotaxis sensory transducer  24.09 
 
 
558 aa  48.9  0.0002  Burkholderia phymatum STM815  Bacteria  normal  normal  0.517537 
 
 
-
 
NC_009636  Smed_0232  methyl-accepting chemotaxis sensory transducer  24 
 
 
532 aa  48.5  0.0003  Sinorhizobium medicae WSM419  Bacteria  normal  0.812987  normal  0.159034 
 
 
-
 
NC_009621  Smed_5117  methyl-accepting chemotaxis sensory transducer  37.18 
 
 
545 aa  48.9  0.0003  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0275586 
 
 
-
 
NC_009831  Ssed_2309  methyl-accepting chemotaxis protein-like protein  30.95 
 
 
547 aa  47.4  0.0008  Shewanella sediminis HAW-EB3  Bacteria  normal  0.037772  hitchhiker  0.0000415162 
 
 
-
 
NC_007796  Mhun_1648  methyl-accepting chemotaxis sensory transducer  29.41 
 
 
801 aa  47  0.0008  Methanospirillum hungatei JF-1  Archaea  normal  0.222536  normal 
 
 
-
 
NC_010505  Mrad2831_4648  methyl-accepting chemotaxis sensory transducer  29.37 
 
 
414 aa  47  0.0009  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.087359 
 
 
-
 
NC_011891  A2cp1_2772  methyl-accepting chemotaxis sensory transducer  27.27 
 
 
547 aa  46.6  0.001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0543063  n/a   
 
 
-
 
NC_011989  Avi_1201  methyl-accepting chemotaxis protein  21.51 
 
 
728 aa  46.6  0.001  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0624  methyl-accepting chemotaxis sensory transducer  23.75 
 
 
577 aa  47  0.001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5069  methyl-accepting chemotaxis sensory transducer  30.16 
 
 
714 aa  46.6  0.001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.277036  normal 
 
 
-
 
NC_009674  Bcer98_3605  methyl-accepting chemotaxis sensory transducer  27.56 
 
 
666 aa  46.6  0.001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0295  methyl-accepting chemotaxis sensory transducer  25.64 
 
 
542 aa  45.4  0.002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.579755 
 
 
-
 
NC_009457  VC0395_A1554  methyl-accepting chemotaxis protein  19.81 
 
 
684 aa  45.4  0.002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2677  methyl-accepting chemotaxis sensory transducer  35.06 
 
 
547 aa  45.8  0.002  Anaeromyxobacter sp. K  Bacteria  normal  0.0498227  n/a   
 
 
-
 
NC_007925  RPC_4147  methyl-accepting chemotaxis sensory transducer  27.1 
 
 
694 aa  45.8  0.002  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0327  methyl-accepting chemotaxis sensory transducer  25.64 
 
 
544 aa  45.8  0.002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.141004  normal 
 
 
-
 
NC_012034  Athe_1130  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.52 
 
 
571 aa  45.4  0.003  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1194  methyl-accepting chemotaxis sensory transducer  27.27 
 
 
547 aa  45.4  0.003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.705182  n/a   
 
 
-
 
NC_010320  Teth514_0389  methyl-accepting chemotaxis sensory transducer  30.1 
 
 
587 aa  45.4  0.003  Thermoanaerobacter sp. X514  Bacteria  normal  0.074674  n/a   
 
 
-
 
NC_009675  Anae109_2399  methyl-accepting chemotaxis sensory transducer  36.84 
 
 
392 aa  45.4  0.003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.17157  normal 
 
 
-
 
NC_008043  TM1040_3209  methyl-accepting chemotaxis sensory transducer  25.42 
 
 
782 aa  45.4  0.003  Ruegeria sp. TM1040  Bacteria  normal  0.684679  normal 
 
 
-
 
NC_013161  Cyan8802_0788  methyl-accepting chemotaxis sensory transducer  28.69 
 
 
484 aa  45.1  0.004  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011126  HY04AAS1_0311  methyl-accepting chemotaxis sensory transducer  25 
 
 
553 aa  44.7  0.004  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.000172296  n/a   
 
 
-
 
NC_011726  PCC8801_0762  methyl-accepting chemotaxis sensory transducer  28.44 
 
 
484 aa  45.1  0.004  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007958  RPD_1867  chemotaxis sensory transducer  21.65 
 
 
714 aa  45.1  0.004  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.133032 
 
 
-
 
NC_011312  VSAL_I2678  methyl-accepting chemotaxis protein  25.5 
 
 
533 aa  45.1  0.004  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.221197  n/a   
 
 
-
 
NC_011658  BCAH187_A0687  methyl-accepting chemotaxis protein  20.4 
 
 
658 aa  44.7  0.004  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3632  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  24.38 
 
 
592 aa  44.7  0.004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.377399 
 
 
-
 
NC_011989  Avi_1200  methyl-accepting chemotaxis protein  24.74 
 
 
728 aa  45.1  0.004  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2119  methyl-accepting chemotaxis sensory transducer  21.18 
 
 
549 aa  44.7  0.004  Enterobacter sp. 638  Bacteria  normal  normal  0.164628 
 
 
-
 
NC_009484  Acry_2387  methyl-accepting chemotaxis sensory transducer  24.8 
 
 
505 aa  45.1  0.004  Acidiphilium cryptum JF-5  Bacteria  normal  0.0566767  n/a   
 
 
-
 
NC_014150  Bmur_2530  methyl-accepting chemotaxis sensory transducer  23.13 
 
 
964 aa  44.7  0.004  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_5513  methyl-accepting chemotaxis sensory transducer  22.38 
 
 
558 aa  44.7  0.005  Burkholderia ambifaria AMMD  Bacteria  normal  0.613268  normal 
 
 
-
 
NC_009253  Dred_2760  methyl-accepting chemotaxis sensory transducer  25.49 
 
 
639 aa  44.7  0.005  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0320  methyl-accepting chemotaxis sensory transducer  26.9 
 
 
588 aa  44.7  0.005  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.415929  n/a   
 
 
-
 
NC_013522  Taci_0285  methyl-accepting chemotaxis sensory transducer  25 
 
 
411 aa  44.3  0.005  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1610  methyl-accepting chemotaxis sensory transducer  28.44 
 
 
572 aa  44.7  0.005  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0355909  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0471  methyl-accepting chemotaxis sensory transducer with Cache sensor  19.05 
 
 
658 aa  44.7  0.005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_3679  methyl-accepting chemotaxis sensory transducer  22.38 
 
 
558 aa  44.7  0.005  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0772371  normal 
 
 
-
 
NC_011725  BCB4264_A0594  methyl-accepting chemotaxis protein  19.9 
 
 
658 aa  44.7  0.005  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1871  methyl-accepting chemotaxis sensory transducer with Cache sensor  22.67 
 
 
660 aa  44.7  0.005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1516  methyl-accepting chemotaxis sensory transducer  23.73 
 
 
660 aa  44.3  0.006  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0222  methyl-accepting chemotaxis sensory transducer  29.91 
 
 
642 aa  44.3  0.006  Caulobacter sp. K31  Bacteria  normal  0.414219  normal  0.376796 
 
 
-
 
NC_012039  Cla_0087  MCP-domain signal transduction protein  22.33 
 
 
600 aa  44.3  0.006  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0619  methyl-accepting chemotaxis protein  18.8 
 
 
658 aa  43.9  0.007  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2029  methyl-accepting chemotaxis sensory transducer  30.91 
 
 
552 aa  43.9  0.007  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_0269  hypothetical protein  22.61 
 
 
596 aa  44.3  0.007  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.979362 
 
 
-
 
NC_008061  Bcen_4577  methyl-accepting chemotaxis sensory transducer  22.38 
 
 
558 aa  43.9  0.007  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.142076  n/a   
 
 
-
 
NC_008543  Bcen2424_3786  methyl-accepting chemotaxis sensory transducer  22.38 
 
 
558 aa  43.9  0.007  Burkholderia cenocepacia HI2424  Bacteria  normal  0.170694  normal  0.253027 
 
 
-
 
NC_011365  Gdia_0590  methyl-accepting chemotaxis sensory transducer  25.73 
 
 
627 aa  43.9  0.008  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.727839  hitchhiker  0.0000148535 
 
 
-
 
NC_006349  BMAA0217  putative methyl-accepting chemotaxis protein  21.9 
 
 
558 aa  43.9  0.008  Burkholderia mallei ATCC 23344  Bacteria  normal  0.482038  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0968  methyl-accepting chemotaxis transducer  21.9 
 
 
558 aa  43.9  0.008  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3254  methyl-accepting chemotaxis sensory transducer  39.22 
 
 
612 aa  43.9  0.008  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0159313  normal  0.0166963 
 
 
-
 
NC_007650  BTH_II0501  methyl-accepting chemotaxis protein, putative  21.9 
 
 
558 aa  43.9  0.008  Burkholderia thailandensis E264  Bacteria  normal  0.585218  n/a   
 
 
-
 
NC_008044  TM1040_0359  methyl-accepting chemotaxis sensory transducer  30.49 
 
 
927 aa  43.9  0.008  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0839  methyl-accepting chemotaxis sensory transducer  30.49 
 
 
927 aa  43.9  0.008  Ruegeria sp. TM1040  Bacteria  normal  0.587759  normal  0.752939 
 
 
-
 
NC_009654  Mmwyl1_3301  methyl-accepting chemotaxis sensory transducer  27.62 
 
 
626 aa  43.9  0.008  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4946  methyl-accepting chemotaxis sensory transducer  22.38 
 
 
558 aa  43.9  0.008  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.143114  normal 
 
 
-
 
NC_009075  BURPS668_A2687  methyl-accepting chemotaxis protein  21.9 
 
 
546 aa  43.5  0.009  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1595  putative methyl-accepting chemotaxis protein  21.9 
 
 
555 aa  43.9  0.009  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1398  putative methyl-accepting chemotaxis protein  21.9 
 
 
555 aa  43.9  0.009  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2542  methyl-accepting chemotaxis protein  21.9 
 
 
546 aa  43.5  0.009  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0254  putative methyl-accepting chemotaxis protein  21.9 
 
 
546 aa  43.5  0.009  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2893  methyl-accepting chemotaxis sensory transducer  23.85 
 
 
589 aa  43.5  0.009  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3737  methyl-accepting chemotaxis sensory transducer  22.38 
 
 
558 aa  43.5  0.009  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.861166  normal  0.649409 
 
 
-
 
NC_011368  Rleg2_5354  methyl-accepting chemotaxis sensory transducer  28.57 
 
 
714 aa  43.9  0.009  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.642158  normal  0.0994281 
 
 
-
 
NC_008542  Bcen2424_1445  methyl-accepting chemotaxis sensory transducer  27.55 
 
 
557 aa  43.5  0.01  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0614  methyl-accepting chemotaxis protein  20.88 
 
 
658 aa  43.5  0.01  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_010508  Bcenmc03_1423  methyl-accepting chemotaxis sensory transducer  27.55 
 
 
557 aa  43.5  0.01  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_004525  methyl-accepting chemotaxis protein  22.34 
 
 
418 aa  43.5  0.01  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2728  chemotaxis sensory transducer  25.27 
 
 
544 aa  43.5  0.01  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.00837045  normal  0.306222 
 
 
-
 
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