| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1648 |
|---|
| Symbol | |
|---|
| ID | 3924337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 1868063 |
|---|
| End bp | 1870468 |
|---|
| Gene Length | 2406 bp |
|---|
| Protein Length | 801 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637897278 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_503098 |
|---|
| Protein GI | 88602920 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.222536 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCATA ATTCTGTTGT TTCAAGACAA GGTGCTGCGG CGGATTCGTT TATTCAGCAT
ATATCACAGG GGTCGTATGC ATTTTCATGC TGGGATGATT CCATTGATGC ATTCCCGGTT
CCGGTTCTCC TCTGTGATCA CACTCTGACG ATTTCACATG CAAACGAAGC CTTCCTCAGT
ATCTCCGGGT TTCAGAATGA GACAATGAAA GGGATGCATT TTAAAAACCT CCCGGTGTCT
CTTCTCTCCG GCGAGTCGGT CTGGGATGCT GCTCTCTCCG GACGGATAAC ATCAGGGATA
GCGGAGGTCG TCTTTCCGAC AGGGGCAGGG TTTTATGAGG TTCGTGCCCT TCCTACGGTG
CCTGAAGGCC AGTCTGTTCC GGTCATGCTG GTGTTCTTTA TCAAGCCGGA CAATCCGCCG
GACTTTCCCT CATATGATAC GATCAGGAGG TCTCTTTCTG AATCCTGTGA GATCCTCGCC
GAGATGGATG GGACTATCCT CTCCATATCT TCCGGGTCCT CAATTCCCAT CCCGGCTGAT
GTTCTTCTGA ATAATAACAT CCTGAAGTGG GACGCTCTCT CAGAGCATCC TGCAATACTG
GGCATTCACA ATCATCCCGG GACAGAGATT CGGTTTATTC ACGAAAATAC CGTATTAGAG
GTCGCATACC TGATTACGGT CCGGGTCTGT GAAGTGGTTC TCCTCAAGCG TTCGGTCCTG
TTTCTGACCA TAACTGAACT AATATCCCCG GTTAATGATA AGGCAGATAC TCCTGACAAT
TCTGCTCTTT CTTCTGCACT GGAACAGCTG GCATCAGCGA TATCTGCAGG GAATTTCTCA
TACCGGATGG AGATAGAATC CTGTCCGGAG GATCTTAAGC CCGGTATTCA GGCGGTAAAT
ACCATGATGG AGCAGGTACA GCTGCAGTTT CAGGCATTGA CTGACGGAAT CTCCCAGATG
AACTCAGGAT GGATTCCGCT CTCCATATCA GCACCAGAGG AAGGTCCGTT TACCGGTATC
ATTCAGGATC TGAACGGGGC ACTGGATAGT CTGCAGCTCA TGATTGCAAC TGTTGAATCC
TTCACGATGT CGGTTATGGA GGGAAATCTT ACCGTGAAAG GGGAAACATC AGGTCTTTCC
GGTTATTATC AGGCGATGAT TGCAGGAATG AATCAGATGC TGGTCAGACT CAATACGCCC
CTTCTTGAGA TGAAACGGGT TGCGAAGGCC TTTGCAGCCT GTGAATTCTC CTCACGGATG
GATGAGAAGA TTGCATATCC CGGAGATTTT GCCAGTATGA AAGAGTCCAT GGATTCGATC
GGGATCTGGT GTTCAGCTGT TGTCGGGGAG ATTGACCGGG TAAGCAGCCG GTATGCATCT
GGTGACTTTA CCGCCCATAT GAGTTCAAAA CTTGAGGTGA CGGGGGATTT CACTACCATC
CGAAGTTCGC TTGACAATAT CGGGGTTCAG GTATCTGAAA GTATCACGGT GCTCAGAAAT
GCAGCAGATG TGCTGACTGA AGAGTCTGAT GGGATTAAAC GGGAGATAGC AGCGGTTTCA
GGGCAGGCTG AGACCCTTGC CTGTTACACC AGTGCCGTAT CTGAACGGGC AGTCAGTGTC
CAGGATGAGG TCAGGCAGAT GGTTATGAGT GCAGATACTG CCATGCAGGC GCTTTGCGGG
ATGAATGAGA AGGTGCAGGA GGTAGCCCAG ACATCTGCCA GAACGCATGA GATGTCATCG
CAGGGAGTGG TGCTGGCAAC ACAGAGCCGT GAAGGGATTG ACGCCATATC AGATGCAGCC
GGGTCGGTGG ACAGTGGGAT TTCCCGTATC CATGAAGAGC TGATCAGCAT TGAGAAGATC
ATCAAGGTAG TTACGGACAT TGCAAACCAG ACAAATCTAC TTGCCATAAA TGCAGCAATT
GAAGCGGCTC ATGCCGGAAG CTATGGAAGG GGATTCGCGG TTGTTGCAAG TGAGGTAAAG
CATCTGGCTG TGCAGTCAAA AGAGTCCACA ACCAGTATTT CCCAGACGCT TGCGGCGTTG
CATGATGCCT TCCGGGAGGT GCGGGATAAG GTCTCACAGG TTCAGGGAGA GATTGAGTCC
AGAAGCCATG CCATATGTGA AATGGTTCAT TTATTTGAAA AGATGGCCGG AGAGGTTGAG
GTTATCGCTA CCATGAGCCG GGAGACCGGG ATACTGTCAC ATGAGCAGGA GAGCAGGATT
CGCGATCTGA ATGAACGGGC ACGGAGAATT GGTGATTTGA TGGTGGAGAC AGCACGGGAT
GCCGGGTCAT CTGCAGAGGC CTGTGCTTCA TCCTGCCGGT CGATTGAACA GATATCCGGT
CATATTGAAG CCGTTGCGCG GTACGCCGAA GAGATTCATG GAGGGATAAG CGGGTTTACC
GTGTAA
|
|---|
| Protein sequence | MIHNSVVSRQ GAAADSFIQH ISQGSYAFSC WDDSIDAFPV PVLLCDHTLT ISHANEAFLS
ISGFQNETMK GMHFKNLPVS LLSGESVWDA ALSGRITSGI AEVVFPTGAG FYEVRALPTV
PEGQSVPVML VFFIKPDNPP DFPSYDTIRR SLSESCEILA EMDGTILSIS SGSSIPIPAD
VLLNNNILKW DALSEHPAIL GIHNHPGTEI RFIHENTVLE VAYLITVRVC EVVLLKRSVL
FLTITELISP VNDKADTPDN SALSSALEQL ASAISAGNFS YRMEIESCPE DLKPGIQAVN
TMMEQVQLQF QALTDGISQM NSGWIPLSIS APEEGPFTGI IQDLNGALDS LQLMIATVES
FTMSVMEGNL TVKGETSGLS GYYQAMIAGM NQMLVRLNTP LLEMKRVAKA FAACEFSSRM
DEKIAYPGDF ASMKESMDSI GIWCSAVVGE IDRVSSRYAS GDFTAHMSSK LEVTGDFTTI
RSSLDNIGVQ VSESITVLRN AADVLTEESD GIKREIAAVS GQAETLACYT SAVSERAVSV
QDEVRQMVMS ADTAMQALCG MNEKVQEVAQ TSARTHEMSS QGVVLATQSR EGIDAISDAA
GSVDSGISRI HEELISIEKI IKVVTDIANQ TNLLAINAAI EAAHAGSYGR GFAVVASEVK
HLAVQSKEST TSISQTLAAL HDAFREVRDK VSQVQGEIES RSHAICEMVH LFEKMAGEVE
VIATMSRETG ILSHEQESRI RDLNERARRI GDLMVETARD AGSSAEACAS SCRSIEQISG
HIEAVARYAE EIHGGISGFT V
|
|---|
| |