More than 300 homologs were found in PanDaTox collection
for query gene RPC_4667 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007925  RPC_4667  methyl-accepting chemotaxis sensory transducer  100 
 
 
590 aa  1178    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.304866 
 
 
-
 
NC_011004  Rpal_0139  putative methyl-accepting chemotaxis sensory transducer  44.37 
 
 
569 aa  429  1e-119  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.287103  n/a   
 
 
-
 
NC_009485  BBta_6729  methyl-accepting chemotaxis sensory transducer  44.04 
 
 
577 aa  388  1e-106  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.340695  normal 
 
 
-
 
NC_007643  Rru_A1396  methyl-accepting chemotaxis sensory transducer  27.09 
 
 
583 aa  122  1.9999999999999998e-26  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3267  putative methyl-accepting chemotaxis sensory transducer  24.26 
 
 
581 aa  93.6  1e-17  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.435218 
 
 
-
 
NC_011989  Avi_4353  methyl-accepting chemotaxis protein  23.54 
 
 
575 aa  89.7  1e-16  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0619  hypothetical protein  25 
 
 
579 aa  87  8e-16  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3566  putative chemotaxis sensory transducer protein  23.67 
 
 
580 aa  87  8e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.81094  normal  0.0204442 
 
 
-
 
NC_010814  Glov_1741  methyl-accepting chemotaxis sensory transducer  24.95 
 
 
597 aa  82.8  0.00000000000002  Geobacter lovleyi SZ  Bacteria  normal  0.049484  n/a   
 
 
-
 
NC_011769  DvMF_0469  methyl-accepting chemotaxis sensory transducer  26.13 
 
 
608 aa  80.1  0.0000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.149565 
 
 
-
 
NC_002939  GSU1287  methyl accepting chemotaxis protein, putative  23.01 
 
 
627 aa  75.9  0.000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2430  methyl-accepting chemotaxis sensory transducer  22.67 
 
 
625 aa  75.9  0.000000000002  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00134328  normal 
 
 
-
 
NC_008609  Ppro_1604  methyl-accepting chemotaxis sensory transducer  24.95 
 
 
617 aa  75.9  0.000000000002  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00349401  n/a   
 
 
-
 
NC_009049  Rsph17029_1105  putative transducer like protein  24.75 
 
 
595 aa  72  0.00000000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.827994 
 
 
-
 
NC_007493  RSP_2441  methyl-accepting chemotaxis sensory transducer  24.58 
 
 
595 aa  71.6  0.00000000004  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.211149  n/a   
 
 
-
 
NC_012918  GM21_2622  methyl-accepting chemotaxis sensory transducer  22.75 
 
 
603 aa  71.6  0.00000000004  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1591  methyl-accepting chemotaxis sensory transducer  22.88 
 
 
603 aa  70.1  0.0000000001  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2996  methyl-accepting chemotaxis sensory transducer  22.2 
 
 
637 aa  69.7  0.0000000001  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00186457  n/a   
 
 
-
 
NC_010333  Caul_5394  putative methyl-accepting chemotaxis sensory transducer  24.76 
 
 
585 aa  66.6  0.000000001  Caulobacter sp. K31  Bacteria  normal  0.0438487  normal 
 
 
-
 
NC_007519  Dde_2108  methyl-accepting chemotaxis sensory transducer  24.42 
 
 
572 aa  65.9  0.000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.798353  n/a   
 
 
-
 
NC_013173  Dbac_1419  methyl-accepting chemotaxis sensory transducer  22.96 
 
 
641 aa  65.1  0.000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_2882  methyl-accepting chemotaxis sensory transducer  30.81 
 
 
526 aa  57  0.000001  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2593  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  25.84 
 
 
517 aa  56.2  0.000002  Pectobacterium wasabiae WPP163  Bacteria  normal  0.460221  n/a   
 
 
-
 
NC_013202  Hmuk_1755  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  29.5 
 
 
634 aa  54.3  0.000005  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.0373336  normal  0.88588 
 
 
-
 
NC_012917  PC1_2293  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  24.85 
 
 
517 aa  53.5  0.00001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0143  chemotaxis sensory transducer  24.55 
 
 
506 aa  53.1  0.00001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1789  hypothetical protein  26.41 
 
 
604 aa  53.5  0.00001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2974  methyl-accepting chemotaxis sensory transducer  29.77 
 
 
460 aa  53.1  0.00002  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.200834 
 
 
-
 
NC_012917  PC1_3039  methyl-accepting chemotaxis sensory transducer  26.16 
 
 
555 aa  52  0.00003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.525671  n/a   
 
 
-
 
NC_011662  Tmz1t_1988  methyl-accepting chemotaxis sensory transducer  30.1 
 
 
674 aa  51.6  0.00004  Thauera sp. MZ1T  Bacteria  normal  0.588025  n/a   
 
 
-
 
NC_010814  Glov_0149  methyl-accepting chemotaxis sensory transducer  30.17 
 
 
533 aa  51.6  0.00004  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0194  methyl-accepting chemotaxis sensory transducer  29.68 
 
 
622 aa  51.6  0.00004  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00784755  n/a   
 
 
-
 
NC_009664  Krad_4271  methyl-accepting chemotaxis sensory transducer  38.71 
 
 
535 aa  51.6  0.00004  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.79817  normal  0.653673 
 
 
-
 
NC_008739  Maqu_3979  methyl-accepting chemotaxis sensory transducer  32.67 
 
 
552 aa  51.6  0.00004  Marinobacter aquaeolei VT8  Bacteria  normal  0.594367  n/a   
 
 
-
 
NC_008740  Maqu_0633  methyl-accepting chemotaxis sensory transducer  32.67 
 
 
552 aa  51.6  0.00004  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  27.27 
 
 
733 aa  51.2  0.00005  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0071  methyl-accepting chemotaxis sensory transducer  27.07 
 
 
525 aa  51.2  0.00005  Rhodothermus marinus DSM 4252  Bacteria  normal  0.603344  n/a   
 
 
-
 
NC_009831  Ssed_1006  methyl-accepting chemotaxis sensory transducer  29.22 
 
 
573 aa  50.8  0.00006  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_2152  putative methyl-accepting chemotaxis sensory transducer  30.07 
 
 
655 aa  50.8  0.00006  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.697016  n/a   
 
 
-
 
NC_013421  Pecwa_1782  methyl-accepting chemotaxis sensory transducer  28.82 
 
 
559 aa  51.2  0.00006  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0029  methyl-accepting chemotaxis sensory transducer  27.19 
 
 
540 aa  50.8  0.00007  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_1589  transducer-like protein, TlpC  24.38 
 
 
580 aa  50.4  0.00008  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1007  methyl-accepting chemotaxis sensory transducer  29.03 
 
 
573 aa  50.4  0.00008  Shewanella sediminis HAW-EB3  Bacteria  normal  0.02936  normal 
 
 
-
 
NC_009092  Shew_0922  methyl-accepting chemotaxis sensory transducer  24.61 
 
 
572 aa  50.4  0.00009  Shewanella loihica PV-4  Bacteria  normal  normal  0.981358 
 
 
-
 
NC_004578  PSPTO_0263  methyl-accepting chemotaxis protein  25.57 
 
 
498 aa  50.4  0.00009  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  26.95 
 
 
706 aa  49.7  0.0001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.27 
 
 
632 aa  50.1  0.0001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  27.52 
 
 
570 aa  49.7  0.0001  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_009049  Rsph17029_0241  transducer-like protein, TlpC  24.38 
 
 
580 aa  50.1  0.0001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1384  methyl-accepting chemotaxis sensory transducer  27.65 
 
 
559 aa  50.1  0.0001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_2397  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
686 aa  49.7  0.0001  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.688228 
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  26.92 
 
 
544 aa  48.9  0.0002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  32 
 
 
627 aa  49.3  0.0002  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  26 
 
 
650 aa  49.3  0.0002  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.94 
 
 
546 aa  49.3  0.0002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_012880  Dd703_2587  methyl-accepting chemotaxis sensory transducer  26.03 
 
 
550 aa  48.5  0.0003  Dickeya dadantii Ech703  Bacteria  normal  0.83115  n/a   
 
 
-
 
NC_013757  Gobs_3394  methyl-accepting chemotaxis sensory transducer with GAF sensor  34.38 
 
 
516 aa  48.5  0.0003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3949  methyl-accepting chemotaxis protein I  28.14 
 
 
547 aa  48.5  0.0003  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.748503  normal 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  29.27 
 
 
572 aa  48.5  0.0003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1236  methyl-accepting chemotaxis sensory transducer  26.16 
 
 
555 aa  48.9  0.0003  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0391  methyl-accepting chemotaxis sensory transducer  28.28 
 
 
499 aa  48.5  0.0003  Saccharophagus degradans 2-40  Bacteria  normal  0.0811848  normal 
 
 
-
 
NC_007925  RPC_4147  methyl-accepting chemotaxis sensory transducer  32.65 
 
 
694 aa  48.5  0.0003  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1245  methyl-accepting chemotaxis sensory transducer  31.58 
 
 
543 aa  48.9  0.0003  Methylobacillus flagellatus KT  Bacteria  normal  0.403133  normal  0.310409 
 
 
-
 
NC_009831  Ssed_2309  methyl-accepting chemotaxis protein-like protein  26.32 
 
 
547 aa  48.5  0.0003  Shewanella sediminis HAW-EB3  Bacteria  normal  0.037772  hitchhiker  0.0000415162 
 
 
-
 
NC_009436  Ent638_2145  methyl-accepting chemotaxis sensory transducer  27.35 
 
 
384 aa  48.9  0.0003  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_2600  methyl-accepting chemotaxis sensory transducer  22.95 
 
 
951 aa  48.5  0.0003  Brachyspira murdochii DSM 12563  Bacteria  normal  0.143462  n/a   
 
 
-
 
NC_010814  Glov_0932  methyl-accepting chemotaxis sensory transducer  30 
 
 
707 aa  48.5  0.0004  Geobacter lovleyi SZ  Bacteria  normal  0.1893  n/a   
 
 
-
 
NC_009439  Pmen_0406  methyl-accepting chemotaxis sensory transducer  29.73 
 
 
678 aa  48.5  0.0004  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0194  methyl-accepting chemotaxis sensory transducer  29.91 
 
 
623 aa  48.1  0.0004  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0632  chemotaxis sensory transducer  25.71 
 
 
736 aa  48.1  0.0004  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.180969  n/a   
 
 
-
 
NC_007952  Bxe_B2520  methyl-accepting chemotaxis sensory transducer  32.17 
 
 
542 aa  48.5  0.0004  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.128174 
 
 
-
 
NC_007963  Csal_1099  methyl-accepting chemotaxis sensory transducer  28.4 
 
 
699 aa  48.1  0.0004  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3209  methyl-accepting chemotaxis sensory transducer  28.42 
 
 
782 aa  48.5  0.0004  Ruegeria sp. TM1040  Bacteria  normal  0.684679  normal 
 
 
-
 
NC_008321  Shewmr4_0946  methyl-accepting chemotaxis sensory transducer  23.68 
 
 
667 aa  48.5  0.0004  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2327  putative methyl-accepting chemotaxis sensory transducer  29.23 
 
 
554 aa  48.5  0.0004  Shewanella amazonensis SB2B  Bacteria  normal  0.644098  normal  0.637343 
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  30.85 
 
 
532 aa  48.1  0.0005  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  26.14 
 
 
730 aa  47.8  0.0005  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_009656  PSPA7_0511  twitching motility protein PilJ  30 
 
 
682 aa  48.1  0.0005  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_2927  methyl-accepting chemotaxis protein  30.7 
 
 
730 aa  47.8  0.0005  Agrobacterium vitis S4  Bacteria  normal  0.0257741  n/a   
 
 
-
 
NC_008322  Shewmr7_0984  methyl-accepting chemotaxis sensory transducer  24.34 
 
 
667 aa  47.8  0.0005  Shewanella sp. MR-7  Bacteria  normal  normal  0.869835 
 
 
-
 
NC_008463  PA14_05360  twitching motility protein PilJ  29.73 
 
 
682 aa  48.1  0.0005  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0948  methyl-accepting chemotaxis sensory transducer  24.34 
 
 
667 aa  47.8  0.0005  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05691  histidine kinase  30 
 
 
538 aa  47.8  0.0005  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013202  Hmuk_1635  methyl-accepting chemotaxis sensory transducer  26.43 
 
 
529 aa  47.8  0.0006  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_009524  PsycPRwf_2156  methyl-accepting chemotaxis sensory transducer  28.83 
 
 
575 aa  47.8  0.0006  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1987  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  20.89 
 
 
518 aa  47.8  0.0006  Shewanella sediminis HAW-EB3  Bacteria  normal  0.185607  normal  0.0170041 
 
 
-
 
NC_009831  Ssed_3256  methyl-accepting chemotaxis protein  27.13 
 
 
558 aa  47.8  0.0006  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0818  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  29.91 
 
 
438 aa  47.8  0.0006  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  27.39 
 
 
752 aa  47.8  0.0006  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_009512  Pput_0804  methyl-accepting chemotaxis sensory transducer  30.48 
 
 
438 aa  47.4  0.0007  Pseudomonas putida F1  Bacteria  normal  normal  0.0800012 
 
 
-
 
NC_008345  Sfri_3852  methyl-accepting chemotaxis sensory transducer  27.93 
 
 
467 aa  47.4  0.0007  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3511  methyl-accepting chemotaxis sensory transducer  31.15 
 
 
771 aa  47.4  0.0008  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.595827 
 
 
-
 
NC_002947  PP_0779  methyl-accepting chemotaxis transducer/sensory box protein  30.48 
 
 
446 aa  47.4  0.0008  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_0982  domain of unknown function DUF1745  25.58 
 
 
666 aa  47.4  0.0008  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.505903  n/a   
 
 
-
 
NC_007492  Pfl01_5305  chemotaxis sensory transducer  32.43 
 
 
686 aa  47.4  0.0008  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.115158  normal  0.281343 
 
 
-
 
NC_007519  Dde_0434  methyl-accepting chemotaxis sensory transducer  26.76 
 
 
579 aa  47.4  0.0008  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2968  methyl-accepting chemotaxis sensory transducer  30.77 
 
 
673 aa  47.4  0.0008  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.000001862  n/a   
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  27.72 
 
 
541 aa  47.4  0.0008  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_008345  Sfri_2212  methyl-accepting chemotaxis sensory transducer  25.64 
 
 
549 aa  47.4  0.0008  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2648  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  26.97 
 
 
520 aa  47.4  0.0008  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
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