| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2397 |
|---|
| Symbol | |
|---|
| ID | 8808178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 2522275 |
|---|
| End bp | 2524335 |
|---|
| Gene Length | 2061 bp |
|---|
| Protein Length | 686 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_003461623 |
|---|
| Protein GI | 289209557 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.688228 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGCAATA TCGTCCTCGG GGGGGTGCTG GTGCTGGCCC TGATCGCGAC GGGCGTGGCT
TTTACCTACC ACGAATTCGA GCAAAGCCAG TATCGCGACC GTGTCGCCCT GGCCAGCGAG
ATGCAGCTGC TTTCGCAGCG ATTGGCGACG GGTACCCTGG AAGCGGCCGG GGGCTCCGAA
CAGGCGATTA CCGATATCAC GGAGTTGCGC AACCGCTTCG ACGATCAGTT CGAGCGGTTG
CGCGATGGGG GCGACGGTCT GCTGCCGCTG CCCGAGGCAG TGTCCAGCGA ACTGTCGGAC
GTCAATCGCG AGTGGTCGCT TTATCGTGAT GATGTCACCA CCGTCATCGT GGGCTCCGAT
GACATTGAGC AGGTGACGGA GTTTTCCGAG GCGGTGGAGG CCTTCTCGCC CGAGCTGGCA
CGTCTGTCCG ATGACGTGGT GCGGCGCATG GTCCAGATCG GGGAGTCGCC GGAGCAGGTT
TATGCGGCCT CGCGCCAGAC CATGCTCATT CAGCGCATCG CCAATAACCT CAACCAGGTG
TTGCAGGGTG GCGCCGCAGC GGCTACCGCG ATCGAGCGGT TCGAGCGCGA TGCCACGTTG
TACGGGCGTG TGCTCGATGG CCTGATCGAG GGCTTCGAAC CCCTGGGTAT CGAGCGCGTC
GATGACGCCG AGACCCAGCG TACGCTGCAG GAGATCGCGA CGTTGTTCAT CGCCTTCAGC
GAGGCGGTCG AGGGGGTGCT GGATACCTCG TCGCAGATCT TCGAGATCAA TGCGGCCGCC
TCCTCGGTCG AGGCTCGCTC TGGGGCCATG CTGGATGTGA CCGGTGGTCT CGAGGCTGCG
CTCAACCGCG AGGCCGAGCA GGCGGGTGTG ATTGCCCTGG TCGGGTTCGC CCTGGGTGGT
CTGGCGCTGC TGCTGTTGAT CGCGATGGGG CTGTTCCTCT ACCGCGACAC CAAGCGCGAG
CTGGCCGAGA CTGAGGCGCA GAACGAGCGC AACCAGCAGG CCATCCTGCG CCTGCTGGAC
GAGATGATGA ACCTCGCCGA TGGGGACCTC ACCGTCAACG CGACCGTGAC CGAGGACTTC
ACCGGGGCGA TCGCGGACTC GATGAACTAC GCGATCGAGA ACCTGCGTAC CCTGGTCGCG
ACCATTAACA CGGTGGCCGC GGACATCAGC GAATCCTCGG CCGCGACCCG TTCGCAGGTG
CTGGGGCTGG CGGAGAAGTC CGAGGAACAA GCCCGCGAGA TCCAGCAGGC GAACGATGCA
ATCGACGAGG TGAGCGAGTC GGTCGACAAG GTCGCGCAGG ATGCCGGGCA GTCGGCCCAG
GTGGCGCGAA ATTCGGTGGA GATCGCGTCC AAGGGCGCGG CCACGGTGCG CCGCTCGATC
GAAGGCATGG ATACCATCCG CGAGCAGATC CAGGAGACCG CGAAACGAAT CAAGCGCCTG
GGCGAGTCCT CGCAGGAGAT CGGCGACATC ATCGGGCTGA TCAATGATAT TGCCGAGCAG
ACCAACGTGC TCGCGCTGAA CGCTGCGATC CAGGCCTCCG CCGCAGGCGA AGCGGGGCGC
GGGTTCGCGG TGGTGGCGGA CGAGGTCCAG CGCCTCGCGG AGCGCTCCTC CGGCGCGACG
CGTCAGGTCG AGGGTCTGGT CAAGGCGATC CAGGCGGATA CCAGCGAGGC GGTTTCGTCG
ATGGAACAAA GTACCGCCAA CGTGGTGTCC GGGGCCGAGA TGGCCCAGGC GGCGGGCGAG
GCGCTGGCCG AGATCGAGCA GGTGTCTGCC GATCTGGCGG ATCTGATCGA CGGGATCGCG
AACTCGGCAC GCCAGCAGTC GGAGATGGCG CGCAACGTGA CCTCGATCAT GGGCCAGATC
CGCGAGATCA CCTCGGAGAC CACTCAGGGT ACCCAGTCCA CCGCGGCCGC CATCGGCGAT
CTGGCGCAAC TGTCCGCGCA GCTCCAGTCC TCGGTGTCGG ACTTCAAGCT CCCCGACCCG
ACGCTACCCG AGCCTGGCGA CGATACCGCC GAGCCCGATG CGTCCTCCGA GGAAACCGTC
CCGAACGAGC AGCGCGCCTG A
|
|---|
| Protein sequence | MRNIVLGGVL VLALIATGVA FTYHEFEQSQ YRDRVALASE MQLLSQRLAT GTLEAAGGSE
QAITDITELR NRFDDQFERL RDGGDGLLPL PEAVSSELSD VNREWSLYRD DVTTVIVGSD
DIEQVTEFSE AVEAFSPELA RLSDDVVRRM VQIGESPEQV YAASRQTMLI QRIANNLNQV
LQGGAAAATA IERFERDATL YGRVLDGLIE GFEPLGIERV DDAETQRTLQ EIATLFIAFS
EAVEGVLDTS SQIFEINAAA SSVEARSGAM LDVTGGLEAA LNREAEQAGV IALVGFALGG
LALLLLIAMG LFLYRDTKRE LAETEAQNER NQQAILRLLD EMMNLADGDL TVNATVTEDF
TGAIADSMNY AIENLRTLVA TINTVAADIS ESSAATRSQV LGLAEKSEEQ AREIQQANDA
IDEVSESVDK VAQDAGQSAQ VARNSVEIAS KGAATVRRSI EGMDTIREQI QETAKRIKRL
GESSQEIGDI IGLINDIAEQ TNVLALNAAI QASAAGEAGR GFAVVADEVQ RLAERSSGAT
RQVEGLVKAI QADTSEAVSS MEQSTANVVS GAEMAQAAGE ALAEIEQVSA DLADLIDGIA
NSARQQSEMA RNVTSIMGQI REITSETTQG TQSTAAAIGD LAQLSAQLQS SVSDFKLPDP
TLPEPGDDTA EPDASSEETV PNEQRA
|
|---|
| |