160 homologs were found in PanDaTox collection
for query gene Gbem_1591 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_2622  methyl-accepting chemotaxis sensory transducer  95.02 
 
 
603 aa  1103    Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1591  methyl-accepting chemotaxis sensory transducer  100 
 
 
603 aa  1201    Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2996  methyl-accepting chemotaxis sensory transducer  51.71 
 
 
637 aa  548  1e-154  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00186457  n/a   
 
 
-
 
NC_007517  Gmet_2430  methyl-accepting chemotaxis sensory transducer  44.48 
 
 
625 aa  417  9.999999999999999e-116  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00134328  normal 
 
 
-
 
NC_002939  GSU1287  methyl accepting chemotaxis protein, putative  41.94 
 
 
627 aa  404  1e-111  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1604  methyl-accepting chemotaxis sensory transducer  41.71 
 
 
617 aa  399  1e-109  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00349401  n/a   
 
 
-
 
NC_010814  Glov_1741  methyl-accepting chemotaxis sensory transducer  39.7 
 
 
597 aa  370  1e-101  Geobacter lovleyi SZ  Bacteria  normal  0.049484  n/a   
 
 
-
 
NC_011769  DvMF_0469  methyl-accepting chemotaxis sensory transducer  30.3 
 
 
608 aa  208  2e-52  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.149565 
 
 
-
 
NC_008751  Dvul_1542  methyl-accepting chemotaxis sensory transducer  31.34 
 
 
580 aa  204  3e-51  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_2108  methyl-accepting chemotaxis sensory transducer  30.39 
 
 
572 aa  187  4e-46  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.798353  n/a   
 
 
-
 
NC_013173  Dbac_1419  methyl-accepting chemotaxis sensory transducer  31.71 
 
 
641 aa  167  6.9999999999999995e-40  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2577  methyl-accepting chemotaxis sensory transducer  28.62 
 
 
596 aa  116  1.0000000000000001e-24  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0805708  n/a   
 
 
-
 
NC_007643  Rru_A1396  methyl-accepting chemotaxis sensory transducer  24.73 
 
 
583 aa  114  6e-24  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2481  methyl-accepting chemotaxis sensory transducer  29.75 
 
 
597 aa  106  1e-21  Anaeromyxobacter sp. K  Bacteria  normal  0.0822598  n/a   
 
 
-
 
NC_007760  Adeh_1376  methyl-accepting chemotaxis sensory transducer  28.67 
 
 
599 aa  104  4e-21  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4667  methyl-accepting chemotaxis sensory transducer  24.29 
 
 
590 aa  72.8  0.00000000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.304866 
 
 
-
 
NC_011004  Rpal_0139  putative methyl-accepting chemotaxis sensory transducer  23.84 
 
 
569 aa  68.9  0.0000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.287103  n/a   
 
 
-
 
NC_010333  Caul_5394  putative methyl-accepting chemotaxis sensory transducer  24.01 
 
 
585 aa  67.8  0.0000000006  Caulobacter sp. K31  Bacteria  normal  0.0438487  normal 
 
 
-
 
NC_010003  Pmob_0137  methyl-accepting chemotaxis sensory transducer  22.22 
 
 
748 aa  61.2  0.00000006  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0837  methyl-accepting chemotaxis sensory transducer  22.11 
 
 
667 aa  61.2  0.00000006  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_4353  methyl-accepting chemotaxis protein  23.47 
 
 
575 aa  60.5  0.00000008  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3267  putative methyl-accepting chemotaxis sensory transducer  21.76 
 
 
581 aa  60.1  0.0000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.435218 
 
 
-
 
NC_010003  Pmob_0228  methyl-accepting chemotaxis sensory transducer  22.11 
 
 
667 aa  59.7  0.0000002  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0496  methyl-accepting chemotaxis sensory transducer  22.77 
 
 
670 aa  59.7  0.0000002  Petrotoga mobilis SJ95  Bacteria  normal  0.474098  n/a   
 
 
-
 
NC_010003  Pmob_0509  methyl-accepting chemotaxis sensory transducer  22.77 
 
 
666 aa  58.5  0.0000003  Petrotoga mobilis SJ95  Bacteria  hitchhiker  0.0000844427  n/a   
 
 
-
 
NC_007298  Daro_0724  chemotaxis sensory transducer  26.09 
 
 
405 aa  57.8  0.0000005  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.435605 
 
 
-
 
NC_012850  Rleg_3566  putative chemotaxis sensory transducer protein  22.79 
 
 
580 aa  57.8  0.0000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.81094  normal  0.0204442 
 
 
-
 
NC_010003  Pmob_1607  methyl-accepting chemotaxis sensory transducer  22.77 
 
 
668 aa  57.8  0.0000006  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6729  methyl-accepting chemotaxis sensory transducer  21.4 
 
 
577 aa  55.8  0.000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.340695  normal 
 
 
-
 
NC_008554  Sfum_1648  methyl-accepting chemotaxis sensory transducer  21.52 
 
 
832 aa  55.1  0.000004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.365743  normal  0.0253033 
 
 
-
 
NC_009428  Rsph17025_0269  hypothetical protein  24.71 
 
 
596 aa  55.1  0.000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.979362 
 
 
-
 
NC_007493  RSP_2441  methyl-accepting chemotaxis sensory transducer  22.29 
 
 
595 aa  54.7  0.000005  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.211149  n/a   
 
 
-
 
NC_009049  Rsph17029_1105  putative transducer like protein  22.29 
 
 
595 aa  54.3  0.000006  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.827994 
 
 
-
 
NC_013158  Huta_1260  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  22.22 
 
 
505 aa  53.5  0.00001  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_013522  Taci_0285  methyl-accepting chemotaxis sensory transducer  24.53 
 
 
411 aa  52.8  0.00002  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0401  methyl-accepting chemotaxis sensory transducer  26.95 
 
 
755 aa  52.4  0.00002  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00237245  n/a   
 
 
-
 
NC_009439  Pmen_2483  methyl-accepting chemotaxis sensory transducer  25.96 
 
 
464 aa  53.1  0.00002  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.132022 
 
 
-
 
NC_002939  GSU1704  methyl-accepting chemotaxis protein, putative  29.92 
 
 
663 aa  52  0.00003  Geobacter sulfurreducens PCA  Bacteria  normal  0.034056  n/a   
 
 
-
 
NC_008789  Hhal_2159  methyl-accepting chemotaxis sensory transducer  21.63 
 
 
414 aa  51.2  0.00005  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1140  chemotaxis sensory transducer  26.51 
 
 
418 aa  51.2  0.00006  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_0247  methyl-accepting chemotaxis sensory transducer  24.73 
 
 
528 aa  51.2  0.00006  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2182  methyl-accepting chemotaxis sensory transducer  30.69 
 
 
682 aa  51.2  0.00006  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.000000000159481 
 
 
-
 
NC_013889  TK90_0580  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  23.95 
 
 
521 aa  50.8  0.00007  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0413099 
 
 
-
 
NC_011989  Avi_2791  methyl-accepting chemotaxis protein  23.21 
 
 
622 aa  50.8  0.00008  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1641  methyl-accepting chemotaxis sensory transducer with GAF sensor  29.27 
 
 
663 aa  50.4  0.00009  Geobacter metallireducens GS-15  Bacteria  normal  0.0112406  normal 
 
 
-
 
NC_013456  VEA_004525  methyl-accepting chemotaxis protein  30.51 
 
 
418 aa  50.4  0.00009  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0759  methyl-accepting chemotaxis sensory transducer  24.41 
 
 
406 aa  49.7  0.0001  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2304  methyl-accepting chemotaxis sensory transducer  22.91 
 
 
713 aa  50.1  0.0001  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1014  methyl-accepting chemotaxis sensory transducer  31.4 
 
 
482 aa  50.1  0.0001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0285  methyl-accepting chemotaxis sensory transducer  27.33 
 
 
711 aa  50.1  0.0001  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011728  BbuZS7_0611  methyl-accepting chemotaxis protein  20.28 
 
 
735 aa  49.3  0.0002  Borrelia burgdorferi ZS7  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00866  hypothetical protein  30 
 
 
418 aa  49.3  0.0002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007643  Rru_A1802  chemotaxis sensory transducer  23.32 
 
 
438 aa  48.9  0.0003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  29.14 
 
 
561 aa  48.9  0.0003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_012850  Rleg_0327  methyl-accepting chemotaxis sensory transducer  27.55 
 
 
544 aa  48.1  0.0004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.141004  normal 
 
 
-
 
NC_011898  Ccel_2100  methyl-accepting chemotaxis sensory transducer  23.93 
 
 
676 aa  48.1  0.0004  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2983  methyl-accepting chemotaxis sensory transducer  29.14 
 
 
561 aa  48.1  0.0005  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0323515 
 
 
-
 
NC_002939  GSU0583  methyl-accepting chemotaxis protein  33.78 
 
 
538 aa  47.8  0.0006  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011370  Rleg2_6126  methyl-accepting chemotaxis sensory transducer  26.97 
 
 
650 aa  47.8  0.0006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.375381  normal  0.0878449 
 
 
-
 
NC_007298  Daro_2728  chemotaxis sensory transducer  26.11 
 
 
544 aa  47.8  0.0006  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.00837045  normal  0.306222 
 
 
-
 
NC_012918  GM21_1237  methyl-accepting chemotaxis sensory transducer with GAF sensor  27.37 
 
 
700 aa  47.8  0.0006  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000000495817 
 
 
-
 
NC_010718  Nther_0162  methyl-accepting chemotaxis sensory transducer  24 
 
 
284 aa  47.8  0.0006  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.355642  normal 
 
 
-
 
NC_008009  Acid345_1526  methyl-accepting chemotaxis sensory transducer  28.83 
 
 
858 aa  47.4  0.0007  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.787952  normal  0.35844 
 
 
-
 
NC_013522  Taci_1590  methyl-accepting chemotaxis sensory transducer  29.91 
 
 
433 aa  47.4  0.0007  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3295  methyl-accepting chemotaxis sensory transducer  33.04 
 
 
720 aa  47  0.0009  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.0000403269  n/a   
 
 
-
 
NC_002947  PP_2257  aerotaxis receptor Aer-1  31.21 
 
 
521 aa  46.6  0.001  Pseudomonas putida KT2440  Bacteria  normal  0.215452  normal  0.0215353 
 
 
-
 
NC_011146  Gbem_0728  methyl-accepting chemotaxis sensory transducer  28.46 
 
 
537 aa  46.6  0.001  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3465  methyl-accepting chemotaxis sensory transducer  21.69 
 
 
419 aa  47  0.001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.61828  n/a   
 
 
-
 
NC_007908  Rfer_1374  methyl-accepting chemotaxis sensory transducer  27.33 
 
 
759 aa  47  0.001  Rhodoferax ferrireducens T118  Bacteria  normal  0.43954  n/a   
 
 
-
 
NC_011884  Cyan7425_4746  methyl-accepting chemotaxis sensory transducer  24.41 
 
 
503 aa  47  0.001  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.000363987 
 
 
-
 
NC_011769  DvMF_0793  methyl-accepting chemotaxis sensory transducer  25.27 
 
 
582 aa  47  0.001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.291791 
 
 
-
 
NC_008782  Ajs_3575  methyl-accepting chemotaxis sensory transducer  30.09 
 
 
754 aa  47  0.001  Acidovorax sp. JS42  Bacteria  normal  0.946853  normal  0.162427 
 
 
-
 
NC_008786  Veis_3018  methyl-accepting chemotaxis sensory transducer  30.91 
 
 
767 aa  46.6  0.001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.238689  normal  0.701163 
 
 
-
 
NC_009512  Pput_3481  methyl-accepting chemotaxis sensory transducer  31.21 
 
 
521 aa  46.6  0.001  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_011992  Dtpsy_2898  methyl-accepting chemotaxis sensory transducer  30.09 
 
 
754 aa  47  0.001  Acidovorax ebreus TPSY  Bacteria  normal  0.0204496  n/a   
 
 
-
 
NC_010322  PputGB1_1888  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.21 
 
 
521 aa  46.6  0.001  Pseudomonas putida GB-1  Bacteria  normal  0.378373  normal 
 
 
-
 
NC_011138  MADE_03785  methyl-accepting chemotaxis protein  28.95 
 
 
360 aa  46.6  0.001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0818  chemotaxis sensory transducer  26.35 
 
 
590 aa  46.6  0.001  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0932  methyl-accepting chemotaxis sensory transducer  31.01 
 
 
707 aa  46.6  0.001  Geobacter lovleyi SZ  Bacteria  normal  0.1893  n/a   
 
 
-
 
NC_013205  Aaci_0527  methyl-accepting chemotaxis sensory transducer  27.89 
 
 
432 aa  45.8  0.002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.209561  n/a   
 
 
-
 
NC_007348  Reut_B5087  histidine kinase, HAMP region: chemotaxis sensory transducer  28.15 
 
 
626 aa  46.2  0.002  Ralstonia eutropha JMP134  Bacteria  normal  0.0967073  n/a   
 
 
-
 
NC_007519  Dde_2734  methyl-accepting chemotaxis sensory transducer  26.97 
 
 
751 aa  46.2  0.002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_2551  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  23.26 
 
 
765 aa  46.2  0.002  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.274696 
 
 
-
 
NC_007948  Bpro_1139  methyl-accepting chemotaxis sensory transducer  32.95 
 
 
692 aa  46.2  0.002  Polaromonas sp. JS666  Bacteria  normal  normal  0.534971 
 
 
-
 
NC_007951  Bxe_A1954  methyl-accepting chemotaxis sensory transducer  27.37 
 
 
511 aa  45.8  0.002  Burkholderia xenovorans LB400  Bacteria  normal  0.249155  normal  0.44726 
 
 
-
 
NC_007963  Csal_0906  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  29.17 
 
 
440 aa  45.8  0.002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1153  methyl-accepting chemotaxis sensory transducer  23.87 
 
 
474 aa  45.8  0.002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0904  methyl-accepting chemotaxis sensory transducer  30.09 
 
 
745 aa  46.2  0.002  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.405383 
 
 
-
 
NC_008781  Pnap_3351  methyl-accepting chemotaxis sensory transducer  32.95 
 
 
759 aa  46.2  0.002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.335724  normal 
 
 
-
 
NC_012791  Vapar_4623  methyl-accepting chemotaxis sensory transducer  29.85 
 
 
770 aa  46.2  0.002  Variovorax paradoxus S110  Bacteria  normal  0.408638  n/a   
 
 
-
 
NC_011662  Tmz1t_1314  methyl-accepting chemotaxis sensory transducer  24.43 
 
 
426 aa  45.8  0.002  Thauera sp. MZ1T  Bacteria  normal  0.116934  n/a   
 
 
-
 
NC_009831  Ssed_1002  methyl-accepting chemotaxis protein-like protein  25 
 
 
1100 aa  45.8  0.002  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  23.09 
 
 
653 aa  46.2  0.002  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_010730  SYO3AOP1_1662  methyl-accepting chemotaxis sensory transducer  24.16 
 
 
550 aa  46.2  0.002  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2333  chemotaxis sensory transducer  21.96 
 
 
461 aa  45.1  0.003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2227  methyl-accepting chemotaxis sensory transducer  25.82 
 
 
481 aa  45.4  0.003  Jannaschia sp. CCS1  Bacteria  normal  0.237535  normal 
 
 
-
 
NC_013223  Dret_1505  methyl-accepting chemotaxis sensory transducer  26.11 
 
 
791 aa  45.1  0.003  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0144234 
 
 
-
 
NC_009075  BURPS668_A0206  methyl-accepting chemotaxis protein  28.66 
 
 
793 aa  45.1  0.003  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_1755  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  22.55 
 
 
634 aa  45.8  0.003  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.0373336  normal  0.88588 
 
 
-
 
NC_010524  Lcho_3795  methyl-accepting chemotaxis sensory transducer  25.54 
 
 
383 aa  45.4  0.003  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
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