Gene MADE_03785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03785 
Symbol 
ID6778804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp4076898 
End bp4077980 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content45% 
IMG OID642757238 
Productmethyl-accepting chemotaxis protein 
Protein accessionYP_002128071 
Protein GI196158582 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID[TIGR03057] X-X-X-Leu-X-X-Gly heptad repeats 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGTAT CTCGCAGTAA ATACGAAGAA AAAGACGCTG AAGTTCGTCA ACTAGAAGTG 
AAACTTGAAG AGGCTCTAAA GAGAGTTGAG CTGCTTGAGA CTGAAAACAG CGATTTACAT
TCTGCTATTG AAACGGCGAC TAATCAGCAA GTGTCGGTAA CTGAATCGGT GGTAGTGAAG
TGCTTAATCG ATGCACTGGG CCAGCTAGAA GGGGTTCGAG AAACGGTTCT GCATTCCTAC
GAACGCATCA ACGCTGAGAG CCAGTCCATC GTTAATATCA ATGAACTATT CAGTGAGTCA
GCGTCGACAT TAAATAAAAT TGTTTCTGAT ATGAGTGGCC TAAATGTACA GATGGGGAGC
ATGAGCGAGC GTATTTCCGG CCTTTCCACT ACTGCTGATA ACATCAACAA GTTTGTTACC
ACAATTACGA GTATTTCTGA TCAAACCAAC TTGCTGGCTC TCAATGCCGC CATAGAGGCT
GCCCGCGCAG GTGACGCTGG GCGAGGGTTT AGTGTTGTTG CCGATGAGGT TCGCGCACTA
GCAACGGAAA CGAACAAATC CGCCACGGAA GTTTCTGAGC TTGTAAACGG AATTATTCAA
TCTACGTCCA AGGCTGTTTC TGGTGTGAAT GAGCTGCGGG GCAATAACGA GCAGTTAGAA
ACTGGTATTA ACCAGCTTAA CGGTAGCTAT GAAAGCATGG TTCAACATTG CGATAGTATG
AAATCTACAA TCAGTGAAGG AGCTATGGCT ACCTTTATCC AAACGGTAAA ACTAGACCAT
GTTGTATGGA AATCAGACGT TTACGCAGTG ATGTGCGGTT ATAGCAGTAA AACAGCAGCG
GAATTTAGTG ACCACGTAAA CTGTCGGCTA GGCAAGTGGT ACAGTGGCAA TGCAAGTACA
GCGATCGGTC AAACAGCCGC ATTCAGAGAA ATCGATATTC CCCACGCGAA GGTGCACAGT
AGCGGTATAG CGGCAGTGCA AGCTAAGCAA AATGGGAACA ATGCTGAAGC TGATGCTAAG
CTCATAGAAA TGGAACAAGC AAGCGAACGG GTTATGACAT TGCTTGACCG ACTGATAAAT
TAA
 
Protein sequence
MFVSRSKYEE KDAEVRQLEV KLEEALKRVE LLETENSDLH SAIETATNQQ VSVTESVVVK 
CLIDALGQLE GVRETVLHSY ERINAESQSI VNINELFSES ASTLNKIVSD MSGLNVQMGS
MSERISGLST TADNINKFVT TITSISDQTN LLALNAAIEA ARAGDAGRGF SVVADEVRAL
ATETNKSATE VSELVNGIIQ STSKAVSGVN ELRGNNEQLE TGINQLNGSY ESMVQHCDSM
KSTISEGAMA TFIQTVKLDH VVWKSDVYAV MCGYSSKTAA EFSDHVNCRL GKWYSGNAST
AIGQTAAFRE IDIPHAKVHS SGIAAVQAKQ NGNNAEADAK LIEMEQASER VMTLLDRLIN