| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0401 |
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| Symbol | |
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| ID | 4808404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 498519 |
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| End bp | 500786 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640105815 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001036832 |
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| Protein GI | 125972922 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00237245 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA GGTTTAATAT AAGAGAGGTT TTCAGTAAAA TCAAAACTTC TGGCTTTAAA
AAAATAAAAA GATTAAAACA GGCGATTGCA TCGAAAGTGC GCTTTTTAAA AAGTTTGAAC
GAAAAAAAAT CAAGTGAAAA AAATATTTTT ATGCCTTTCT TCAGGCTTAA AGATGTAAGT
ATAGGAATTA AACTCAATGT AATTGTATCT ATTGTTCTTG TAGTATCTTT GTCTGTAGTA
ATTTTGTACT CTTTTGGCAT TGTGAGGAAT ATCCTTGTGG AGCAGGCAAA GGACGGAACG
CTGCAGGTTT CAAAGCAAAC CAATTCGAAT ATGCGAATGC TCCTTGAATC AATGGATCAG
GAGGCAACGG CTTTAAGCAG AAATGAACAA ATAGCGGATA TTATTTCGAG GTTGAACAGT
ACTGATGATG CTACTTTACA AAGCAGATAC TCGAGTCAGT TAAGAACGAT GCTGACTAAT
TATGTGGACG AAAAAAGTAA CTATTTTTAC ACTATTCTGG CGGTTTCCAA TAACTACCTA
TATTCGATTT CCGGACAGCA AATAATAAGT CATCAGATAA ATATAAAAGA AGTTGACAGT
ATAAAATCTT TTGTTGAAAG TACGAAATAT TCAAAATGGT ATGATCCTTA CGTGCAAGAT
GTTTTAATTC ATCAGGACAC AACCGGTTTG GGCGGAAAAG TAATTACTTT GGCTAAAAAA
GTTTATTCAA GGACAAAGCT AAAAAGTCCG GGGCAGCTGT TCTTCTATAT CAACTATGAA
AATTTGGGCA GAATATTTAA TGATTTGCAT TTGCCTTATG ACGGGGTTAT GTATGTTGTC
GGAAACGACT ATAACATTGT AATGAATCCT TCAAAAAAAG AACACATGTC GCTGGCTATA
AATGATGTTA GCCAGGAAGA AAAAGAACGG AATTTTTATA TTGACGAAGA GATATTCAAG
AAAATTAAAT CAGAACCGAG CGGTGCTTTT ACAACAAAGT TGTATGGGAA AGATGTTTTG
ATAACTTTTT CAACAATAGA TAAAGTCAAT GTTACGGATT TGGGATGGAC TTTTGTAACC
GTTACGGAAG TAGATAAGAT TACGGAAAGT GTCAACAGAG TTTCGGCACA GGTAATAATT
ATCGGTTTAA TTTGTTTGGC GCTGGGGATA CTGTTATCTC AATTAATAAA TAAAGACATT
ACGAAGAATA TAAAGAAACT GGTAAAAACA ATGGAGAAAG TAGGCAGCGG TAATTTATCA
ATAGAGTTTA AAGTTGAGGA GAGAAAGGAT GAGATAGGCA AGCTTAGTAA CAGTTTTGCA
AAGATGATAA GCAACTTGAA CGGATTGATT ATGAGTGTTA AACATGCTTC GGATGTCACA
ATTGACGCAT CTTCCAATGT ATCCGCAAAA ATTCAGGAAA CGTATGCTTC TATTCAACAA
ACAAATGCTA TTTTGGACGT TATAAAGGAA AAGAGTTTTC AACAGGGTAA GATTGTAAAA
GAAGGTGAGC GACAGGTTGC CTTGACAAAA GATGAAGTCA ATCAGGCAAA AGACACGATG
AAAGATGTAG ATGCGATACT TTCCAAGTCA AAAGAAATCA GCGAAGATAA TCGAATGTCA
GTAAGCTTGT TGCATGAAAT GTCTCAAAAT ATCAGAACAG CTATGAATGA AATAGGTGCG
GAATCTAAAG AGCTTATTGC AACTTCAAAG GAAATAACAA AATTTACAAG ACAGATCAAA
GAGATTTCAG AACAAACAAA ATTGATTGCT CTGAATTCAG CTATTGAGTC AGCCCGATTG
GGAGCCCAGG GAAAGACATT CCATTTGTTA TCTGAAGAAA CCAGAAACTT GGCTTCAAAA
ACCAAAGATT TGTCGGGCAG CATAGACCAG ATAATTCAAA ATCTTATTGA AAAGATTAAC
AATACCAACA AGGTTGTATT AAAGTTGGAC AAAGTGGCCG AGAATACCGA AAATTCGGTA
AAGGACGTAA CAGAAAGTCT GGATAAAAAT ATTGAATTTT TAAATGAGAT AACATCAAAT
GTCTCTCGGA TAAAACAGGT ATTTACGCAC ATAGACGACT TTGTCAATCA GATAGTATCT
ACGATAGAAT ATATAAGCGC AAGTGCCGAG GCGAATATTC AAGACATTTC TGATGTAAGC
AAAGCGATGA ACGAGCAGAT AAAGTGTCAG GAATCATTAT TGGAGCAGAC CACCAATTTG
CTTAACTTGT CACAGGAGCT CAAGAAAAAA GCTGAAGAGA TATCCTGA
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| Protein sequence | MKNRFNIREV FSKIKTSGFK KIKRLKQAIA SKVRFLKSLN EKKSSEKNIF MPFFRLKDVS
IGIKLNVIVS IVLVVSLSVV ILYSFGIVRN ILVEQAKDGT LQVSKQTNSN MRMLLESMDQ
EATALSRNEQ IADIISRLNS TDDATLQSRY SSQLRTMLTN YVDEKSNYFY TILAVSNNYL
YSISGQQIIS HQINIKEVDS IKSFVESTKY SKWYDPYVQD VLIHQDTTGL GGKVITLAKK
VYSRTKLKSP GQLFFYINYE NLGRIFNDLH LPYDGVMYVV GNDYNIVMNP SKKEHMSLAI
NDVSQEEKER NFYIDEEIFK KIKSEPSGAF TTKLYGKDVL ITFSTIDKVN VTDLGWTFVT
VTEVDKITES VNRVSAQVII IGLICLALGI LLSQLINKDI TKNIKKLVKT MEKVGSGNLS
IEFKVEERKD EIGKLSNSFA KMISNLNGLI MSVKHASDVT IDASSNVSAK IQETYASIQQ
TNAILDVIKE KSFQQGKIVK EGERQVALTK DEVNQAKDTM KDVDAILSKS KEISEDNRMS
VSLLHEMSQN IRTAMNEIGA ESKELIATSK EITKFTRQIK EISEQTKLIA LNSAIESARL
GAQGKTFHLL SEETRNLASK TKDLSGSIDQ IIQNLIEKIN NTNKVVLKLD KVAENTENSV
KDVTESLDKN IEFLNEITSN VSRIKQVFTH IDDFVNQIVS TIEYISASAE ANIQDISDVS
KAMNEQIKCQ ESLLEQTTNL LNLSQELKKK AEEIS
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